RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 CNTLNQ9NXG0 1405 aa11.37□□□□□ -0.59
COL12A1-204ENST00000419671 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
COL12A1-204ENST00000419671 ZC3H13Q5T200 1668 aaKnown RBP11.37□□□□□ -0.59
COL12A1-204ENST00000419671 ABCC3O15438 1527 aa11.37□□□□□ -0.59
COL12A1-204ENST00000419671 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
COL12A1-204ENST00000419671 ROCK2O75116 1388 aaKnown RBP11.36□□□□□ -0.59
COL12A1-204ENST00000419671 NPATQ14207 1427 aa11.35□□□□□ -0.59
COL12A1-204ENST00000419671 GPRASP1Q5JY77 1395 aa11.35□□□□□ -0.59
COL12A1-204ENST00000419671 ANP32CO43423 234 aa11.35□□□□□ -0.59
COL12A1-204ENST00000419671 GGT6Q6P531 493 aa11.34□□□□□ -0.59
COL12A1-204ENST00000419671 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
COL12A1-204ENST00000419671 KIAA1210Q9ULL0 1709 aa11.33□□□□□ -0.6
COL12A1-204ENST00000419671 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
COL12A1-204ENST00000419671 PIK3C2BO00750 1634 aa11.32□□□□□ -0.6
COL12A1-204ENST00000419671 PPLO60437 1756 aa11.32□□□□□ -0.6
COL12A1-204ENST00000419671 ADGRB3O60242 1522 aa11.32□□□□□ -0.6
COL12A1-204ENST00000419671 REREQ9P2R6 1566 aa11.32□□□□□ -0.6
COL12A1-204ENST00000419671 ST20-MTHFSA0A0A6YYL1 179 aa11.31□□□□□ -0.6
COL12A1-204ENST00000419671 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
COL12A1-204ENST00000419671 SYNMO15061 1565 aa11.31□□□□□ -0.6
COL12A1-204ENST00000419671 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-204ENST00000419671 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
COL12A1-204ENST00000419671 MYOM2P54296 1465 aa11.3□□□□□ -0.6
COL12A1-204ENST00000419671 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
COL12A1-204ENST00000419671 PREX1Q8TCU6 1659 aa11.29□□□□□ -0.6
COL12A1-204ENST00000419671 COL17A1Q9UMD9 1497 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-204ENST00000419671 NOS1P29475 1434 aa11.29□□□□□ -0.6
COL12A1-204ENST00000419671 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
COL12A1-204ENST00000419671 ARHGAP31Q2M1Z3 1444 aa11.28□□□□□ -0.6
COL12A1-204ENST00000419671 AGLP35573 1532 aa11.27□□□□□ -0.61
COL12A1-204ENST00000419671 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.61
COL12A1-204ENST00000419671 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.61
COL12A1-204ENST00000419671 CLTCQ00610 1675 aaKnown RBP11.26□□□□□ -0.61
COL12A1-204ENST00000419671 TESK2Q96S53 571 aa11.25□□□□□ -0.61
COL12A1-204ENST00000419671 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-204ENST00000419671 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
COL12A1-204ENST00000419671 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-204ENST00000419671 ADGRF5Q8IZF2 1346 aa11.24□□□□□ -0.61
COL12A1-204ENST00000419671 SCAF11Q99590 1463 aaKnown RBP11.23□□□□□ -0.61
COL12A1-204ENST00000419671 DISP3Q9P2K9 1392 aa11.23□□□□□ -0.61
COL12A1-204ENST00000419671 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
COL12A1-204ENST00000419671 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
COL12A1-204ENST00000419671 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
COL12A1-204ENST00000419671 SETBP1Q9Y6X0 1596 aa11.22□□□□□ -0.61
COL12A1-204ENST00000419671 MYO3AQ8NEV4 1616 aa11.21□□□□□ -0.61
COL12A1-204ENST00000419671 CCDC184Q52MB2 194 aa11.21□□□□□ -0.62
COL12A1-204ENST00000419671 PIK3C2GO75747 1445 aa11.21□□□□□ -0.62
COL12A1-204ENST00000419671 MYOM1P52179 1685 aa11.2□□□□□ -0.62
COL12A1-204ENST00000419671 CHGAP10645 457 aaKnown RBP11.2□□□□□ -0.62
COL12A1-204ENST00000419671 CFAP70Q5T0N1 1121 aa11.2□□□□□ -0.62
COL12A1-204ENST00000419671 ERVK-7P63135 1459 aa11.19□□□□□ -0.62
COL12A1-204ENST00000419671 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
COL12A1-204ENST00000419671 IDI1Q13907 227 aa11.18□□□□□ -0.62
COL12A1-204ENST00000419671 KDM5AP29375 1690 aaKnown RBP11.18□□□□□ -0.62
COL12A1-204ENST00000419671 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
COL12A1-204ENST00000419671 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
COL12A1-204ENST00000419671 TMF1P82094 1093 aa11.17□□□□□ -0.62
COL12A1-204ENST00000419671 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
COL12A1-204ENST00000419671 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
COL12A1-204ENST00000419671 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
COL12A1-204ENST00000419671 ARHGEF28Q8N1W1 1705 aaKnown RBP11.16□□□□□ -0.62
COL12A1-204ENST00000419671 EIF5BO60841 1220 aaKnown RBP11.15□□□□□ -0.62
COL12A1-204ENST00000419671 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-204ENST00000419671 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
COL12A1-204ENST00000419671 PER1O15534 1290 aaPredicted RBP11.14□□□□□ -0.63
COL12A1-204ENST00000419671 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
COL12A1-204ENST00000419671 MRS2Q9HD23 443 aa11.13□□□□□ -0.63
COL12A1-204ENST00000419671 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
COL12A1-204ENST00000419671 MLECQ14165 292 aa11.13□□□□□ -0.63
COL12A1-204ENST00000419671 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-204ENST00000419671 KTN1Q86UP2 1357 aaKnown RBP11.12□□□□□ -0.63
COL12A1-204ENST00000419671 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-204ENST00000419671 ASXL1Q8IXJ9 1541 aa11.11□□□□□ -0.63
COL12A1-204ENST00000419671 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
COL12A1-204ENST00000419671 PANK3Q9H999 370 aa11.11□□□□□ -0.63
COL12A1-204ENST00000419671 PARD3Q8TEW0 1356 aa11.1□□□□□ -0.63
COL12A1-204ENST00000419671 SETD1AO15047 1707 aaKnown RBP11.1□□□□□ -0.63
COL12A1-204ENST00000419671 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
COL12A1-204ENST00000419671 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL12A1-204ENST00000419671 TMEM132EQ6IEE7 984 aa11.09□□□□□ -0.63
COL12A1-204ENST00000419671 ZMYM3Q14202 1370 aa11.09□□□□□ -0.63
COL12A1-204ENST00000419671 FAM9BQ8IZU0 186 aa11.09□□□□□ -0.63
COL12A1-204ENST00000419671 RALBP1Q15311 655 aa11.08□□□□□ -0.64
COL12A1-204ENST00000419671 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
COL12A1-204ENST00000419671 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
COL12A1-204ENST00000419671 MYBBP1AQ9BQG0 1328 aaKnown RBP11.08□□□□□ -0.64
COL12A1-204ENST00000419671 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
COL12A1-204ENST00000419671 UBR1Q8IWV7 1749 aa11.07□□□□□ -0.64
COL12A1-204ENST00000419671 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
COL12A1-204ENST00000419671 CENPJQ9HC77 1338 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-204ENST00000419671 C3P01024 1663 aa11.07□□□□□ -0.64
COL12A1-204ENST00000419671 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-204ENST00000419671 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
COL12A1-204ENST00000419671 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
COL12A1-204ENST00000419671 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
COL12A1-204ENST00000419671 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
COL12A1-204ENST00000419671 PTPRMP28827 1452 aa11.04□□□□□ -0.64
COL12A1-204ENST00000419671 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
COL12A1-204ENST00000419671 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
COL12A1-204ENST00000419671 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms