RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TNRQ92752 1358 aa10.71□□□□□ -0.7
UBR4-206ENST00000419533 RPGRIP1LQ68CZ1 1315 aa10.71□□□□□ -0.7
UBR4-206ENST00000419533 TAOK2Q9UL54 1235 aa10.71□□□□□ -0.7
UBR4-206ENST00000419533 HFM1A2PYH4 1435 aa10.7□□□□□ -0.7
UBR4-206ENST00000419533 L3MBTL2Q969R5 705 aa10.7□□□□□ -0.7
UBR4-206ENST00000419533 CEBPAP49715 358 aaPredicted RBP10.7□□□□□ -0.7
UBR4-206ENST00000419533 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
UBR4-206ENST00000419533 TRAK1Q9UPV9 953 aa10.69□□□□□ -0.7
UBR4-206ENST00000419533 ZFYVE16Q7Z3T8 1539 aa10.69□□□□□ -0.7
UBR4-206ENST00000419533 PTMAP06454 111 aaKnown RBP10.69□□□□□ -0.7
UBR4-206ENST00000419533 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
UBR4-206ENST00000419533 KDM6BO15054 1643 aa10.69□□□□□ -0.7
UBR4-206ENST00000419533 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
UBR4-206ENST00000419533 RTEL1-TNFRSF6BF6WH68 1400 aa10.68□□□□□ -0.7
UBR4-206ENST00000419533 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
UBR4-206ENST00000419533 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
UBR4-206ENST00000419533 SYCP2Q9BX26 1530 aa10.68□□□□□ -0.7
UBR4-206ENST00000419533 FAM135AQ9P2D6 1515 aa10.68□□□□□ -0.7
UBR4-206ENST00000419533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBR4-206ENST00000419533 UHRF1BP1Q6BDS2 1440 aa10.67□□□□□ -0.7
UBR4-206ENST00000419533 KIAA1211Q6ZU35 1233 aa10.67□□□□□ -0.7
UBR4-206ENST00000419533 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
UBR4-206ENST00000419533 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
UBR4-206ENST00000419533 GOLGA6L6A8MZA4 724 aa10.67□□□□□ -0.7
UBR4-206ENST00000419533 EVC2Q86UK5 1308 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 TSPOAP1O95153 1857 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 DUOX2Q9NRD8 1548 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 ABCC5O15440 1437 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 LTV1Q96GA3 475 aaPredicted RBP10.66□□□□□ -0.7
UBR4-206ENST00000419533 GORABQ5T7V8 394 aa10.66□□□□□ -0.7
UBR4-206ENST00000419533 RWDD1Q9H446 243 aaPredicted RBP10.66□□□□□ -0.7
UBR4-206ENST00000419533 ERBINQ96RT1 1412 aa10.65□□□□□ -0.7
UBR4-206ENST00000419533 TRAPPC8Q9Y2L5 1435 aa10.65□□□□□ -0.7
UBR4-206ENST00000419533 PSME1Q06323 249 aa10.65□□□□□ -0.7
UBR4-206ENST00000419533 COG3Q96JB2 828 aa10.65□□□□□ -0.7
UBR4-206ENST00000419533 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
UBR4-206ENST00000419533 EVA1CP58658 441 aa10.65□□□□□ -0.71
UBR4-206ENST00000419533 MAGI3Q5TCQ9 1506 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 HMMRO75330 724 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 CHMP3Q9Y3E7 222 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 G3V3G9 751 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 APBB1O00213 710 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
UBR4-206ENST00000419533 NOP58Q9Y2X3 529 aaKnown RBP10.63□□□□□ -0.71
UBR4-206ENST00000419533 PIP4K2BP78356 416 aa10.63□□□□□ -0.71
UBR4-206ENST00000419533 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
UBR4-206ENST00000419533 SMC4Q9NTJ3 1288 aa10.63□□□□□ -0.71
UBR4-206ENST00000419533 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
UBR4-206ENST00000419533 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 CGNL1Q0VF96 1302 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 TOM1O60784 492 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 GTF2E1P29083 439 aaPredicted RBP10.62□□□□□ -0.71
UBR4-206ENST00000419533 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 NRDCO43847 1150 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 MYO5CQ9NQX4 1742 aa10.62□□□□□ -0.71
UBR4-206ENST00000419533 FBXO31Q5XUX0 539 aaPredicted RBP10.61□□□□□ -0.71
UBR4-206ENST00000419533 ZMYM3Q14202 1370 aa10.61□□□□□ -0.71
UBR4-206ENST00000419533 PMFBP1Q8TBY8 1022 aa10.61□□□□□ -0.71
UBR4-206ENST00000419533 GPRASP1Q5JY77 1395 aa10.61□□□□□ -0.71
UBR4-206ENST00000419533 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
UBR4-206ENST00000419533 SHROOM2Q13796 1616 aa10.6□□□□□ -0.71
UBR4-206ENST00000419533 SLC26A8Q96RN1 970 aa10.6□□□□□ -0.71
UBR4-206ENST00000419533 MINK1Q8N4C8 1332 aaPredicted RBP10.6□□□□□ -0.71
UBR4-206ENST00000419533 ATP7AQ04656 1500 aa10.6□□□□□ -0.71
UBR4-206ENST00000419533 NCOA1Q15788 1441 aa10.6□□□□□ -0.71
UBR4-206ENST00000419533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.6□□□□□ -0.713e-6■□□□□ 8.9
UBR4-206ENST00000419533 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 ST20-MTHFSA0A0A6YYL1 179 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 ERICH6BQ5W0A0 696 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
UBR4-206ENST00000419533 CCDC146Q8IYE0 955 aa10.58□□□□□ -0.72
UBR4-206ENST00000419533 SHANK2Q9UPX8 1470 aa10.58□□□□□ -0.72
UBR4-206ENST00000419533 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
UBR4-206ENST00000419533 PANK3Q9H999 370 aa10.58□□□□□ -0.72
UBR4-206ENST00000419533 CENPJQ9HC77 1338 aaPredicted RBP10.58□□□□□ -0.72
UBR4-206ENST00000419533 CLSTN1O94985 981 aa10.58□□□□□ -0.72
UBR4-206ENST00000419533 DNTTIP2Q5QJE6 756 aaKnown RBP10.58□□□□□ -0.72
UBR4-206ENST00000419533 DEKP35659 375 aaKnown RBP10.58□□□□□ -0.72
UBR4-206ENST00000419533 MYBBP1AQ9BQG0 1328 aaKnown RBP10.57□□□□□ -0.72
UBR4-206ENST00000419533 ESCO1Q5FWF5 840 aa10.57□□□□□ -0.72
UBR4-206ENST00000419533 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
UBR4-206ENST00000419533 UBAP1LF5GYI3 381 aa10.57□□□□□ -0.72
UBR4-206ENST00000419533 HSPA2P54652 639 aa10.56□□□□□ -0.72
UBR4-206ENST00000419533 TEFQ10587 303 aa10.56□□□□□ -0.72
UBR4-206ENST00000419533 TTC5Q8N0Z6 440 aa10.56□□□□□ -0.72
UBR4-206ENST00000419533 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
UBR4-206ENST00000419533 IDI1Q13907 227 aa10.56□□□□□ -0.72
UBR4-206ENST00000419533 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
UBR4-206ENST00000419533 MSH6P52701 1360 aa10.55□□□□□ -0.72
UBR4-206ENST00000419533 TRIM6-TRIM34B2RNG4 842 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms