RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 RIMS2Q9UQ26 1411 aa26.07■■□□□ 1.76
EPCAM-203ENST00000419334 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
EPCAM-203ENST00000419334 HDGFP51858 240 aaKnown RBP26.03■■□□□ 1.76
EPCAM-203ENST00000419334 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.01■■□□□ 1.75
EPCAM-203ENST00000419334 ANKRD30BQ9BXX2 1392 aa25.99■■□□□ 1.75
EPCAM-203ENST00000419334 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
EPCAM-203ENST00000419334 PLEKHG1Q9ULL1 1385 aa25.98■■□□□ 1.75
EPCAM-203ENST00000419334 LTBP4Q8N2S1 1624 aa25.98■■□□□ 1.75
EPCAM-203ENST00000419334 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
EPCAM-203ENST00000419334 PPP1R15AO75807 674 aaPredicted RBP25.96■■□□□ 1.75
EPCAM-203ENST00000419334 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
EPCAM-203ENST00000419334 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
EPCAM-203ENST00000419334 PPLO60437 1756 aa25.94■■□□□ 1.74
EPCAM-203ENST00000419334 RPGRIP1LQ68CZ1 1315 aa25.92■■□□□ 1.74
EPCAM-203ENST00000419334 NUTM2DQ5VT03 806 aaPredicted RBP25.92■■□□□ 1.74
EPCAM-203ENST00000419334 IFT172Q9UG01 1749 aa25.9■■□□□ 1.74
EPCAM-203ENST00000419334 DIP2AQ14689 1571 aa25.89■■□□□ 1.73
EPCAM-203ENST00000419334 STRCP1A6NGW2 1772 aa25.88■■□□□ 1.73
EPCAM-203ENST00000419334 SETBP1Q9Y6X0 1596 aa25.88■■□□□ 1.73
EPCAM-203ENST00000419334 NRXN3Q9Y4C0 1643 aa25.88■■□□□ 1.73
EPCAM-203ENST00000419334 CPS1P31327 1500 aa25.88■■□□□ 1.73
EPCAM-203ENST00000419334 BCANQ96GW7 911 aa25.87■■□□□ 1.73
EPCAM-203ENST00000419334 ADAMTS13Q76LX8 1427 aa25.87■■□□□ 1.73
EPCAM-203ENST00000419334 FBXO41Q8TF61 875 aa25.86■■□□□ 1.73
EPCAM-203ENST00000419334 SLC26A8Q96RN1 970 aa25.86■■□□□ 1.73
EPCAM-203ENST00000419334 CERKQ8TCT0 537 aa25.85■■□□□ 1.73
EPCAM-203ENST00000419334 VGFO15240 615 aaPredicted RBP25.84■■□□□ 1.73
EPCAM-203ENST00000419334 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
EPCAM-203ENST00000419334 TBX22Q9Y458 520 aa25.83■■□□□ 1.73
EPCAM-203ENST00000419334 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
EPCAM-203ENST00000419334 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
EPCAM-203ENST00000419334 NWD1Q149M9 1564 aa25.82■■□□□ 1.72
EPCAM-203ENST00000419334 CHD2O14647 1828 aaKnown RBP25.81■■□□□ 1.72
EPCAM-203ENST00000419334 IQSEC2Q5JU85 1478 aa25.81■■□□□ 1.72
EPCAM-203ENST00000419334 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
EPCAM-203ENST00000419334 PIK3R4Q99570 1358 aa25.78■■□□□ 1.72
EPCAM-203ENST00000419334 KCNA6P17658 529 aa25.77■■□□□ 1.72
EPCAM-203ENST00000419334 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
EPCAM-203ENST00000419334 MYOM2P54296 1465 aa25.75■■□□□ 1.71
EPCAM-203ENST00000419334 NKTRP30414 1462 aaKnown RBP25.74■■□□□ 1.71
EPCAM-203ENST00000419334 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
EPCAM-203ENST00000419334 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
EPCAM-203ENST00000419334 ADGRF5Q8IZF2 1346 aa25.73■■□□□ 1.71
EPCAM-203ENST00000419334 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
EPCAM-203ENST00000419334 PIK3C2GO75747 1445 aa25.71■■□□□ 1.71
EPCAM-203ENST00000419334 XIRP1Q702N8 1843 aaKnown RBP25.7■■□□□ 1.71
EPCAM-203ENST00000419334 XRN1Q8IZH2 1706 aaKnown RBP25.69■■□□□ 1.7
EPCAM-203ENST00000419334 METP08581 1390 aa25.69■■□□□ 1.7
EPCAM-203ENST00000419334 PTPRUQ92729 1446 aa25.68■■□□□ 1.7
EPCAM-203ENST00000419334 STAC3Q96MF2 364 aa25.67■■□□□ 1.7
EPCAM-203ENST00000419334 LAMC1P11047 1609 aa25.66■■□□□ 1.7
EPCAM-203ENST00000419334 DCAF11Q8TEB1 546 aa25.64■■□□□ 1.7
EPCAM-203ENST00000419334 AMOTL2Q9Y2J4 779 aa25.64■■□□□ 1.7
EPCAM-203ENST00000419334 SIN3AQ96ST3 1273 aa25.63■■□□□ 1.69
EPCAM-203ENST00000419334 TMEM94Q12767 1356 aa25.62■■□□□ 1.69
EPCAM-203ENST00000419334 PROSER2Q86WR7 435 aaPredicted RBP25.62■■□□□ 1.69
EPCAM-203ENST00000419334 ASXL1Q8IXJ9 1541 aa25.59■■□□□ 1.69
EPCAM-203ENST00000419334 PRAG1Q86YV5 1406 aa25.59■■□□□ 1.69
EPCAM-203ENST00000419334 NCOA3Q9Y6Q9 1424 aa25.58■■□□□ 1.69
EPCAM-203ENST00000419334 C14orf93Q9H972 538 aaKnown RBP25.58■■□□□ 1.69
EPCAM-203ENST00000419334 KDM2AQ9Y2K7 1162 aa25.58■■□□□ 1.69
EPCAM-203ENST00000419334 NEUROD1Q13562 356 aa25.56■■□□□ 1.68
EPCAM-203ENST00000419334 PTCH1Q13635 1447 aa25.55■■□□□ 1.68
EPCAM-203ENST00000419334 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
EPCAM-203ENST00000419334 CFAP70Q5T0N1 1121 aa25.54■■□□□ 1.68
EPCAM-203ENST00000419334 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
EPCAM-203ENST00000419334 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
EPCAM-203ENST00000419334 L3MBTL2Q969R5 705 aa25.52■■□□□ 1.68
EPCAM-203ENST00000419334 LRPPRCP42704 1394 aaKnown RBP25.52■■□□□ 1.68
EPCAM-203ENST00000419334 TECPR2O15040 1411 aa25.52■■□□□ 1.68
EPCAM-203ENST00000419334 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.68
EPCAM-203ENST00000419334 TOM1O60784 492 aa25.51■■□□□ 1.67
EPCAM-203ENST00000419334 ADGRB1O14514 1584 aa25.5■■□□□ 1.67
EPCAM-203ENST00000419334 TMEM132EQ6IEE7 984 aa25.5■■□□□ 1.67
EPCAM-203ENST00000419334 YTHDC2Q9H6S0 1430 aaKnown RBP25.5■■□□□ 1.67
EPCAM-203ENST00000419334 MSH6P52701 1360 aa25.49■■□□□ 1.67
EPCAM-203ENST00000419334 ABCC11Q96J66 1382 aa25.49■■□□□ 1.67
EPCAM-203ENST00000419334 ROBO2Q9HCK4 1378 aa25.49■■□□□ 1.67
EPCAM-203ENST00000419334 CLSPNQ9HAW4 1339 aa25.47■■□□□ 1.67
EPCAM-203ENST00000419334 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
EPCAM-203ENST00000419334 NALCNQ8IZF0 1738 aa25.46■■□□□ 1.67
EPCAM-203ENST00000419334 C14orf37Q86TY3 774 aa25.44■■□□□ 1.66
EPCAM-203ENST00000419334 C19orf44Q9H6X5 657 aa25.44■■□□□ 1.66
EPCAM-203ENST00000419334 STK26Q9P289 416 aa25.44■■□□□ 1.66
EPCAM-203ENST00000419334 ADGRL3Q9HAR2 1447 aa25.44■■□□□ 1.66
EPCAM-203ENST00000419334 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
EPCAM-203ENST00000419334 DCCP43146 1447 aa25.43■■□□□ 1.66
EPCAM-203ENST00000419334 DLC1Q96QB1 1528 aa25.42■■□□□ 1.66
EPCAM-203ENST00000419334 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
EPCAM-203ENST00000419334 SIRT1Q96EB6 747 aa25.4■■□□□ 1.66
EPCAM-203ENST00000419334 TRPM1Q7Z4N2 1603 aa25.38■■□□□ 1.65
EPCAM-203ENST00000419334 PIP4K2BP78356 416 aa25.37■■□□□ 1.65
EPCAM-203ENST00000419334 CADPS2Q86UW7 1296 aa25.37■■□□□ 1.65
EPCAM-203ENST00000419334 ATF3P18847 181 aa25.36■■□□□ 1.65
EPCAM-203ENST00000419334 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
EPCAM-203ENST00000419334 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
EPCAM-203ENST00000419334 ARHGEF28Q8N1W1 1705 aaKnown RBP25.34■■□□□ 1.65
EPCAM-203ENST00000419334 WAPLQ7Z5K2 1190 aa25.34■■□□□ 1.65
EPCAM-203ENST00000419334 CCER1Q8TC90 406 aaPredicted RBP25.34■■□□□ 1.65
EPCAM-203ENST00000419334 ROBO1Q9Y6N7 1651 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms