RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 E9PCH4 1651 aa28.28■■■□□ 2.12
COPS8-204ENST00000419015 TMEM94Q12767 1356 aa28.27■■■□□ 2.12
COPS8-204ENST00000419015 IQGAP3Q86VI3 1631 aa28.25■■■□□ 2.11
COPS8-204ENST00000419015 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
COPS8-204ENST00000419015 SENP3Q9H4L4 574 aaPredicted RBP28.24■■■□□ 2.11
COPS8-204ENST00000419015 FAM135BQ49AJ0 1406 aa28.23■■■□□ 2.11
COPS8-204ENST00000419015 PLEKHG1Q9ULL1 1385 aa28.22■■■□□ 2.11
COPS8-204ENST00000419015 RIMS2Q9UQ26 1411 aa28.21■■■□□ 2.11
COPS8-204ENST00000419015 CHD2O14647 1828 aaKnown RBP28.21■■■□□ 2.11
COPS8-204ENST00000419015 PROSER2Q86WR7 435 aaPredicted RBP28.18■■■□□ 2.1
COPS8-204ENST00000419015 RBM33Q96EV2 1170 aaKnown RBP28.18■■■□□ 2.1
COPS8-204ENST00000419015 ROBO1Q9Y6N7 1651 aa28.16■■■□□ 2.1
COPS8-204ENST00000419015 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
COPS8-204ENST00000419015 BCANQ96GW7 911 aa28.13■■■□□ 2.09
COPS8-204ENST00000419015 PHF23Q9BUL5 403 aaPredicted RBP28.13■■■□□ 2.09
COPS8-204ENST00000419015 NUP155O75694 1391 aa28.12■■■□□ 2.09
COPS8-204ENST00000419015 ADAMTS13Q76LX8 1427 aa28.1■■■□□ 2.09
COPS8-204ENST00000419015 PPP1R15AO75807 674 aaPredicted RBP28.1■■■□□ 2.09
COPS8-204ENST00000419015 TBX22Q9Y458 520 aa28.1■■■□□ 2.09
COPS8-204ENST00000419015 ITGAEP38570 1179 aa28.09■■■□□ 2.09
COPS8-204ENST00000419015 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
COPS8-204ENST00000419015 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.08■■■□□ 2.09
COPS8-204ENST00000419015 MSH6P52701 1360 aa28.08■■■□□ 2.09
COPS8-204ENST00000419015 CHGAP10645 457 aaKnown RBP28.07■■■□□ 2.08
COPS8-204ENST00000419015 DIP2AQ14689 1571 aa28.07■■■□□ 2.08
COPS8-204ENST00000419015 RGS17Q9UGC6 210 aaPredicted RBP28.05■■■□□ 2.08
COPS8-204ENST00000419015 NUTM2DQ5VT03 806 aaPredicted RBP28.04■■■□□ 2.08
COPS8-204ENST00000419015 SPHKAPQ2M3C7 1700 aa28.04■■■□□ 2.08
COPS8-204ENST00000419015 NCOA3Q9Y6Q9 1424 aa28.03■■■□□ 2.08
COPS8-204ENST00000419015 PIK3R4Q99570 1358 aa28.01■■■□□ 2.07
COPS8-204ENST00000419015 SLAIN2Q9P270 581 aa28.01■■■□□ 2.07
COPS8-204ENST00000419015 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
COPS8-204ENST00000419015 NRXN3Q9Y4C0 1643 aa27.98■■■□□ 2.07
COPS8-204ENST00000419015 PHLPP1O60346 1717 aa27.97■■■□□ 2.07
COPS8-204ENST00000419015 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.96■■■□□ 2.07
COPS8-204ENST00000419015 TRPM2O94759 1503 aa27.96■■■□□ 2.07
COPS8-204ENST00000419015 PTPRUQ92729 1446 aa27.95■■■□□ 2.07
COPS8-204ENST00000419015 SETBP1Q9Y6X0 1596 aa27.93■■■□□ 2.06
COPS8-204ENST00000419015 COL16A1Q07092 1604 aaPredicted RBP27.92■■■□□ 2.06
COPS8-204ENST00000419015 NAIPQ13075 1403 aa27.91■■■□□ 2.06
COPS8-204ENST00000419015 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.06
COPS8-204ENST00000419015 CLTCL1P53675 1640 aa27.89■■■□□ 2.06
COPS8-204ENST00000419015 C19orf44Q9H6X5 657 aa27.89■■■□□ 2.06
COPS8-204ENST00000419015 AMOTL2Q9Y2J4 779 aa27.89■■■□□ 2.06
COPS8-204ENST00000419015 JCADQ9P266 1359 aa27.86■■■□□ 2.05
COPS8-204ENST00000419015 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
COPS8-204ENST00000419015 POTEAQ6S8J7 498 aa27.85■■■□□ 2.05
COPS8-204ENST00000419015 C14orf37Q86TY3 774 aa27.85■■■□□ 2.05
COPS8-204ENST00000419015 NEXMIFQ5QGS0 1516 aa27.85■■■□□ 2.05
COPS8-204ENST00000419015 AHDC1Q5TGY3 1603 aaPredicted RBP27.84■■■□□ 2.05
COPS8-204ENST00000419015 KIF1BO60333 1816 aa27.82■■■□□ 2.04
COPS8-204ENST00000419015 ATF3P18847 181 aa27.81■■■□□ 2.04
COPS8-204ENST00000419015 ZNF326Q5BKZ1 582 aaKnown RBP27.81■■■□□ 2.04
COPS8-204ENST00000419015 METP08581 1390 aa27.81■■■□□ 2.04
COPS8-204ENST00000419015 DCCP43146 1447 aa27.8■■■□□ 2.04
COPS8-204ENST00000419015 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
COPS8-204ENST00000419015 SHPRHQ149N8 1683 aa27.76■■■□□ 2.03
COPS8-204ENST00000419015 LRP6O75581 1613 aa27.76■■■□□ 2.03
COPS8-204ENST00000419015 BRINP3Q76B58 766 aa27.75■■■□□ 2.03
COPS8-204ENST00000419015 SPATA31A6Q5VVP1 1343 aa27.73■■■□□ 2.03
COPS8-204ENST00000419015 SETD1AO15047 1707 aaKnown RBP27.73■■■□□ 2.03
COPS8-204ENST00000419015 MST1RQ04912 1400 aa27.73■■■□□ 2.03
COPS8-204ENST00000419015 ASXL1Q8IXJ9 1541 aa27.71■■■□□ 2.03
COPS8-204ENST00000419015 NALCNQ8IZF0 1738 aa27.7■■■□□ 2.03
COPS8-204ENST00000419015 ADGRL3Q9HAR2 1447 aa27.69■■■□□ 2.02
COPS8-204ENST00000419015 NHSL1Q5SYE7 1610 aa27.69■■■□□ 2.02
COPS8-204ENST00000419015 TRIM52Q96A61 297 aa27.66■■■□□ 2.02
COPS8-204ENST00000419015 PPLO60437 1756 aa27.64■■■□□ 2.02
COPS8-204ENST00000419015 SETD5Q9C0A6 1442 aa27.64■■■□□ 2.02
COPS8-204ENST00000419015 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
COPS8-204ENST00000419015 PTCH1Q13635 1447 aa27.63■■■□□ 2.01
COPS8-204ENST00000419015 PRAG1Q86YV5 1406 aa27.62■■■□□ 2.01
COPS8-204ENST00000419015 VGFO15240 615 aaPredicted RBP27.62■■■□□ 2.01
COPS8-204ENST00000419015 RPGRIP1LQ68CZ1 1315 aa27.61■■■□□ 2.01
COPS8-204ENST00000419015 ROBO2Q9HCK4 1378 aa27.59■■■□□ 2.01
COPS8-204ENST00000419015 MEX3CQ5U5Q3 659 aaKnown RBP27.56■■■□□ 2
COPS8-204ENST00000419015 ZNF772Q68DY9 489 aaPredicted RBP27.56■■■□□ 2
COPS8-204ENST00000419015 LAMC1P11047 1609 aa27.56■■■□□ 2
COPS8-204ENST00000419015 C1orf167Q5SNV9 1468 aa27.55■■■□□ 2
COPS8-204ENST00000419015 DDX17Q92841 729 aaKnown RBP27.54■■■□□ 2
COPS8-204ENST00000419015 FOXD1Q16676 465 aa27.53■■■□□ 2
COPS8-204ENST00000419015 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
COPS8-204ENST00000419015 NUTM2BA6NNL0 878 aaPredicted RBP27.5■■□□□ 1.99
COPS8-204ENST00000419015 NUTM2EB1AL46 878 aaPredicted RBP27.5■■□□□ 1.99
COPS8-204ENST00000419015 NUTM2AQ8IVF1 878 aaPredicted RBP27.5■■□□□ 1.99
COPS8-204ENST00000419015 IFT172Q9UG01 1749 aa27.5■■□□□ 1.99
COPS8-204ENST00000419015 PNPLA6Q8IY17 1366 aa27.49■■□□□ 1.99
COPS8-204ENST00000419015 SPATA31E1Q6ZUB1 1445 aa27.49■■□□□ 1.99
COPS8-204ENST00000419015 CCDC144AA2RUR9 1427 aa27.47■■□□□ 1.99
COPS8-204ENST00000419015 ADGRF5Q8IZF2 1346 aa27.45■■□□□ 1.99
COPS8-204ENST00000419015 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
COPS8-204ENST00000419015 MPHOSPH9Q99550 1183 aa27.44■■□□□ 1.98
COPS8-204ENST00000419015 AFF2P51816 1311 aa27.43■■□□□ 1.98
COPS8-204ENST00000419015 SOS2Q07890 1332 aaPredicted RBP27.43■■□□□ 1.98
COPS8-204ENST00000419015 CDC42BPGQ6DT37 1551 aa27.41■■□□□ 1.98
COPS8-204ENST00000419015 CDK12Q9NYV4 1490 aaPredicted RBP27.41■■□□□ 1.98
COPS8-204ENST00000419015 RXRBP28702 533 aa27.41■■□□□ 1.98
COPS8-204ENST00000419015 TECPR2O15040 1411 aa27.41■■□□□ 1.98
COPS8-204ENST00000419015 RGL3Q3MIN7 710 aa27.39■■□□□ 1.98
COPS8-204ENST00000419015 ANKRD30BQ9BXX2 1392 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms