RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 E9PCH4 1651 aa19.8■□□□□ 0.76
TMEM248-203ENST00000418375 HRCP23327 699 aa19.79■□□□□ 0.76
TMEM248-203ENST00000418375 HSPA1LP34931 641 aa19.79■□□□□ 0.76
TMEM248-203ENST00000418375 ADGRB3O60242 1522 aa19.79■□□□□ 0.76
TMEM248-203ENST00000418375 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
TMEM248-203ENST00000418375 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
TMEM248-203ENST00000418375 MPHOSPH9Q99550 1183 aa19.77■□□□□ 0.76
TMEM248-203ENST00000418375 ILDR2Q71H61 639 aa19.76■□□□□ 0.75
TMEM248-203ENST00000418375 SLC26A8Q96RN1 970 aa19.75■□□□□ 0.75
TMEM248-203ENST00000418375 ALKQ9UM73 1620 aa19.74■□□□□ 0.75
TMEM248-203ENST00000418375 BCANQ96GW7 911 aa19.73■□□□□ 0.75
TMEM248-203ENST00000418375 KCNA6P17658 529 aa19.72■□□□□ 0.75
TMEM248-203ENST00000418375 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
TMEM248-203ENST00000418375 FOXD1Q16676 465 aa19.72■□□□□ 0.75
TMEM248-203ENST00000418375 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
TMEM248-203ENST00000418375 PPP1R15AO75807 674 aaPredicted RBP19.7■□□□□ 0.74
TMEM248-203ENST00000418375 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
TMEM248-203ENST00000418375 RIMS2Q9UQ26 1411 aa19.69■□□□□ 0.74
TMEM248-203ENST00000418375 SPHKAPQ2M3C7 1700 aa19.69■□□□□ 0.74
TMEM248-203ENST00000418375 TRPM2O94759 1503 aa19.68■□□□□ 0.74
TMEM248-203ENST00000418375 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
TMEM248-203ENST00000418375 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
TMEM248-203ENST00000418375 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
TMEM248-203ENST00000418375 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.67■□□□□ 0.74
TMEM248-203ENST00000418375 TMEM131LA2VDJ0 1609 aa19.66■□□□□ 0.74
TMEM248-203ENST00000418375 SOCS7O14512 581 aa19.63■□□□□ 0.73
TMEM248-203ENST00000418375 NKTRP30414 1462 aaKnown RBP19.62■□□□□ 0.73
TMEM248-203ENST00000418375 RBM33Q96EV2 1170 aaKnown RBP19.62■□□□□ 0.73
TMEM248-203ENST00000418375 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
TMEM248-203ENST00000418375 NUTM2DQ5VT03 806 aaPredicted RBP19.61■□□□□ 0.73
TMEM248-203ENST00000418375 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
TMEM248-203ENST00000418375 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
TMEM248-203ENST00000418375 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
TMEM248-203ENST00000418375 CLTCL1P53675 1640 aa19.6■□□□□ 0.73
TMEM248-203ENST00000418375 MED1Q15648 1581 aaPredicted RBP19.6■□□□□ 0.73
TMEM248-203ENST00000418375 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
TMEM248-203ENST00000418375 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
TMEM248-203ENST00000418375 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
TMEM248-203ENST00000418375 MSH6P52701 1360 aa19.57■□□□□ 0.72
TMEM248-203ENST00000418375 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
TMEM248-203ENST00000418375 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
TMEM248-203ENST00000418375 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
TMEM248-203ENST00000418375 KIF1BO60333 1816 aa19.53■□□□□ 0.72
TMEM248-203ENST00000418375 RPGRIP1LQ68CZ1 1315 aa19.52■□□□□ 0.72
TMEM248-203ENST00000418375 DIP2AQ14689 1571 aa19.52■□□□□ 0.71
TMEM248-203ENST00000418375 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
TMEM248-203ENST00000418375 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
TMEM248-203ENST00000418375 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
TMEM248-203ENST00000418375 C14orf37Q86TY3 774 aa19.5■□□□□ 0.71
TMEM248-203ENST00000418375 VGFO15240 615 aaPredicted RBP19.48■□□□□ 0.71
TMEM248-203ENST00000418375 RGL3Q3MIN7 710 aa19.48■□□□□ 0.71
TMEM248-203ENST00000418375 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
TMEM248-203ENST00000418375 AMOTL2Q9Y2J4 779 aa19.48■□□□□ 0.71
TMEM248-203ENST00000418375 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
TMEM248-203ENST00000418375 ROBO1Q9Y6N7 1651 aa19.47■□□□□ 0.71
TMEM248-203ENST00000418375 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
TMEM248-203ENST00000418375 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
TMEM248-203ENST00000418375 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
TMEM248-203ENST00000418375 ATF3P18847 181 aa19.43■□□□□ 0.7
TMEM248-203ENST00000418375 CADPS2Q86UW7 1296 aa19.43■□□□□ 0.7
TMEM248-203ENST00000418375 SETBP1Q9Y6X0 1596 aa19.43■□□□□ 0.7
TMEM248-203ENST00000418375 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
TMEM248-203ENST00000418375 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
TMEM248-203ENST00000418375 METP08581 1390 aa19.4■□□□□ 0.7
TMEM248-203ENST00000418375 PPLO60437 1756 aa19.37■□□□□ 0.69
TMEM248-203ENST00000418375 JCADQ9P266 1359 aa19.36■□□□□ 0.69
TMEM248-203ENST00000418375 ADGRF5Q8IZF2 1346 aa19.36■□□□□ 0.69
TMEM248-203ENST00000418375 RGS17Q9UGC6 210 aaPredicted RBP19.36■□□□□ 0.69
TMEM248-203ENST00000418375 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.36■□□□□ 0.69
TMEM248-203ENST00000418375 XRN1Q8IZH2 1706 aaKnown RBP19.35■□□□□ 0.69
TMEM248-203ENST00000418375 DCCP43146 1447 aa19.34■□□□□ 0.69
TMEM248-203ENST00000418375 PHLPP1O60346 1717 aa19.34■□□□□ 0.69
TMEM248-203ENST00000418375 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
TMEM248-203ENST00000418375 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
TMEM248-203ENST00000418375 MYOM2P54296 1465 aa19.33■□□□□ 0.68
TMEM248-203ENST00000418375 BRINP3Q76B58 766 aa19.32■□□□□ 0.68
TMEM248-203ENST00000418375 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
TMEM248-203ENST00000418375 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
TMEM248-203ENST00000418375 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
TMEM248-203ENST00000418375 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
TMEM248-203ENST00000418375 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
TMEM248-203ENST00000418375 COL16A1Q07092 1604 aaPredicted RBP19.29■□□□□ 0.68
TMEM248-203ENST00000418375 ADGRL3Q9HAR2 1447 aa19.29■□□□□ 0.68
TMEM248-203ENST00000418375 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
TMEM248-203ENST00000418375 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
TMEM248-203ENST00000418375 MST1RQ04912 1400 aa19.27■□□□□ 0.68
TMEM248-203ENST00000418375 SPATA31A6Q5VVP1 1343 aa19.26■□□□□ 0.67
TMEM248-203ENST00000418375 POTEAQ6S8J7 498 aa19.26■□□□□ 0.67
TMEM248-203ENST00000418375 PTCH1Q13635 1447 aa19.25■□□□□ 0.67
TMEM248-203ENST00000418375 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
TMEM248-203ENST00000418375 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
TMEM248-203ENST00000418375 ASXL1Q8IXJ9 1541 aa19.24■□□□□ 0.67
TMEM248-203ENST00000418375 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
TMEM248-203ENST00000418375 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
TMEM248-203ENST00000418375 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
TMEM248-203ENST00000418375 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
TMEM248-203ENST00000418375 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
TMEM248-203ENST00000418375 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
TMEM248-203ENST00000418375 LRP6O75581 1613 aa19.2■□□□□ 0.66
TMEM248-203ENST00000418375 LAMC1P11047 1609 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms