RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.44
HLA-DPA1-241ENST00000417724 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
HLA-DPA1-241ENST00000417724 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
HLA-DPA1-241ENST00000417724 ADGRB3O60242 1522 aa12.25□□□□□ -0.45
HLA-DPA1-241ENST00000417724 NWD1Q149M9 1564 aa12.24□□□□□ -0.45
HLA-DPA1-241ENST00000417724 JCADQ9P266 1359 aa12.24□□□□□ -0.45
HLA-DPA1-241ENST00000417724 PHLPP1O60346 1717 aa12.23□□□□□ -0.45
HLA-DPA1-241ENST00000417724 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
HLA-DPA1-241ENST00000417724 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
HLA-DPA1-241ENST00000417724 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
HLA-DPA1-241ENST00000417724 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
HLA-DPA1-241ENST00000417724 C14orf37Q86TY3 774 aa12.22□□□□□ -0.45
HLA-DPA1-241ENST00000417724 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLA-DPA1-241ENST00000417724 NCOA3Q9Y6Q9 1424 aa12.21□□□□□ -0.45
HLA-DPA1-241ENST00000417724 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.46
HLA-DPA1-241ENST00000417724 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 FAM50AQ14320 339 aaKnown RBP12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
HLA-DPA1-241ENST00000417724 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
HLA-DPA1-241ENST00000417724 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
HLA-DPA1-241ENST00000417724 ATF3P18847 181 aa12.19□□□□□ -0.46
HLA-DPA1-241ENST00000417724 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
HLA-DPA1-241ENST00000417724 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
HLA-DPA1-241ENST00000417724 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
HLA-DPA1-241ENST00000417724 GCC2Q8IWJ2 1684 aa12.17□□□□□ -0.46
HLA-DPA1-241ENST00000417724 COL16A1Q07092 1604 aaPredicted RBP12.16□□□□□ -0.46
HLA-DPA1-241ENST00000417724 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
HLA-DPA1-241ENST00000417724 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.46
HLA-DPA1-241ENST00000417724 NUTM2DQ5VT03 806 aaPredicted RBP12.15□□□□□ -0.46
HLA-DPA1-241ENST00000417724 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.14□□□□□ -0.47
HLA-DPA1-241ENST00000417724 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 RXRBP28702 533 aa12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
HLA-DPA1-241ENST00000417724 LRP6O75581 1613 aa12.12□□□□□ -0.47
HLA-DPA1-241ENST00000417724 AHDC1Q5TGY3 1603 aaPredicted RBP12.12□□□□□ -0.47
HLA-DPA1-241ENST00000417724 E9PCH4 1651 aa12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
HLA-DPA1-241ENST00000417724 UNC13BO14795 1591 aa12.1□□□□□ -0.47
HLA-DPA1-241ENST00000417724 TRPM2O94759 1503 aa12.1□□□□□ -0.47
HLA-DPA1-241ENST00000417724 NUP155O75694 1391 aa12.08□□□□□ -0.48
HLA-DPA1-241ENST00000417724 ROCK1Q13464 1354 aa12.08□□□□□ -0.48
HLA-DPA1-241ENST00000417724 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
HLA-DPA1-241ENST00000417724 DCCP43146 1447 aa12.08□□□□□ -0.48
HLA-DPA1-241ENST00000417724 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
HLA-DPA1-241ENST00000417724 IQGAP3Q86VI3 1631 aa12.07□□□□□ -0.48
HLA-DPA1-241ENST00000417724 CDK12Q9NYV4 1490 aaPredicted RBP12.07□□□□□ -0.48
HLA-DPA1-241ENST00000417724 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
HLA-DPA1-241ENST00000417724 AFF2P51816 1311 aa12.06□□□□□ -0.48
HLA-DPA1-241ENST00000417724 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
HLA-DPA1-241ENST00000417724 QTRT2Q9H974 415 aaKnown RBP12.04□□□□□ -0.48
HLA-DPA1-241ENST00000417724 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
HLA-DPA1-241ENST00000417724 MST1RQ04912 1400 aa12.03□□□□□ -0.48
HLA-DPA1-241ENST00000417724 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
HLA-DPA1-241ENST00000417724 C8orf37Q96NL8 207 aa12.03□□□□□ -0.48
HLA-DPA1-241ENST00000417724 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
HLA-DPA1-241ENST00000417724 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
HLA-DPA1-241ENST00000417724 ITGAEP38570 1179 aa12.02□□□□□ -0.49
HLA-DPA1-241ENST00000417724 METP08581 1390 aa12.02□□□□□ -0.49
HLA-DPA1-241ENST00000417724 NHSL1Q5SYE7 1610 aa12.01□□□□□ -0.49
HLA-DPA1-241ENST00000417724 NRXN3Q9Y4C0 1643 aa12.01□□□□□ -0.49
HLA-DPA1-241ENST00000417724 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
HLA-DPA1-241ENST00000417724 DDX17Q92841 729 aaKnown RBP12□□□□□ -0.49
HLA-DPA1-241ENST00000417724 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
HLA-DPA1-241ENST00000417724 ADGRL3Q9HAR2 1447 aa12□□□□□ -0.49
HLA-DPA1-241ENST00000417724 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
HLA-DPA1-241ENST00000417724 ADAMTS2O95450 1211 aa11.98□□□□□ -0.49
HLA-DPA1-241ENST00000417724 VGFO15240 615 aaPredicted RBP11.97□□□□□ -0.49
HLA-DPA1-241ENST00000417724 RGS12O14924 1447 aa11.96□□□□□ -0.49
HLA-DPA1-241ENST00000417724 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 FOXD1Q16676 465 aa11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 USP21Q9UK80 565 aa11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 KIF1BO60333 1816 aa11.95□□□□□ -0.5
HLA-DPA1-241ENST00000417724 ORAI2Q96SN7 254 aa11.94□□□□□ -0.5
HLA-DPA1-241ENST00000417724 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
HLA-DPA1-241ENST00000417724 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
HLA-DPA1-241ENST00000417724 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
HLA-DPA1-241ENST00000417724 LAMC1P11047 1609 aa11.93□□□□□ -0.5
HLA-DPA1-241ENST00000417724 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
HLA-DPA1-241ENST00000417724 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
HLA-DPA1-241ENST00000417724 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
HLA-DPA1-241ENST00000417724 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
HLA-DPA1-241ENST00000417724 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
HLA-DPA1-241ENST00000417724 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
HLA-DPA1-241ENST00000417724 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
HLA-DPA1-241ENST00000417724 NPHP3Q7Z494 1330 aa11.89□□□□□ -0.51
HLA-DPA1-241ENST00000417724 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms