RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
DDR1-231ENST00000417521 BCANQ96GW7 911 aa24.51■■□□□ 1.51
DDR1-231ENST00000417521 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
DDR1-231ENST00000417521 TMEM131LA2VDJ0 1609 aa24.51■■□□□ 1.51
DDR1-231ENST00000417521 PLEKHG1Q9ULL1 1385 aa24.51■■□□□ 1.51
DDR1-231ENST00000417521 TOM1O60784 492 aa24.51■■□□□ 1.51
DDR1-231ENST00000417521 KCNA6P17658 529 aa24.49■■□□□ 1.51
DDR1-231ENST00000417521 LRRC7Q96NW7 1537 aa24.49■■□□□ 1.51
DDR1-231ENST00000417521 ACIN1Q9UKV3 1341 aaKnown RBP24.46■■□□□ 1.51
DDR1-231ENST00000417521 TBX22Q9Y458 520 aa24.45■■□□□ 1.5
DDR1-231ENST00000417521 NUTM2DQ5VT03 806 aaPredicted RBP24.44■■□□□ 1.5
DDR1-231ENST00000417521 ZNF326Q5BKZ1 582 aaKnown RBP24.42■■□□□ 1.5
DDR1-231ENST00000417521 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
DDR1-231ENST00000417521 TRPM2O94759 1503 aa24.41■■□□□ 1.5
DDR1-231ENST00000417521 MPHOSPH9Q99550 1183 aa24.39■■□□□ 1.5
DDR1-231ENST00000417521 SETD5Q9C0A6 1442 aa24.39■■□□□ 1.5
DDR1-231ENST00000417521 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.49
DDR1-231ENST00000417521 SPHKAPQ2M3C7 1700 aa24.39■■□□□ 1.49
DDR1-231ENST00000417521 PIP4K2BP78356 416 aa24.38■■□□□ 1.49
DDR1-231ENST00000417521 PROSER2Q86WR7 435 aaPredicted RBP24.38■■□□□ 1.49
DDR1-231ENST00000417521 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
DDR1-231ENST00000417521 TMEM94Q12767 1356 aa24.37■■□□□ 1.49
DDR1-231ENST00000417521 ADAMTS13Q76LX8 1427 aa24.36■■□□□ 1.49
DDR1-231ENST00000417521 FOXD1Q16676 465 aa24.35■■□□□ 1.49
DDR1-231ENST00000417521 PIK3R4Q99570 1358 aa24.34■■□□□ 1.49
DDR1-231ENST00000417521 MYO5BQ9ULV0 1848 aa24.34■■□□□ 1.49
DDR1-231ENST00000417521 NKTRP30414 1462 aaKnown RBP24.33■■□□□ 1.49
DDR1-231ENST00000417521 CLTCL1P53675 1640 aa24.33■■□□□ 1.49
DDR1-231ENST00000417521 RPGRIP1LQ68CZ1 1315 aa24.3■■□□□ 1.48
DDR1-231ENST00000417521 NWD1Q149M9 1564 aa24.3■■□□□ 1.48
DDR1-231ENST00000417521 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
DDR1-231ENST00000417521 VGFO15240 615 aaPredicted RBP24.29■■□□□ 1.48
DDR1-231ENST00000417521 RBM33Q96EV2 1170 aaKnown RBP24.29■■□□□ 1.48
DDR1-231ENST00000417521 ALKQ9UM73 1620 aa24.29■■□□□ 1.48
DDR1-231ENST00000417521 DIP2AQ14689 1571 aa24.28■■□□□ 1.48
DDR1-231ENST00000417521 HSPA1LP34931 641 aa24.28■■□□□ 1.48
DDR1-231ENST00000417521 AMOTL2Q9Y2J4 779 aa24.26■■□□□ 1.47
DDR1-231ENST00000417521 CCDC144AA2RUR9 1427 aa24.26■■□□□ 1.47
DDR1-231ENST00000417521 HRCP23327 699 aa24.26■■□□□ 1.47
DDR1-231ENST00000417521 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
DDR1-231ENST00000417521 NCOA3Q9Y6Q9 1424 aa24.25■■□□□ 1.47
DDR1-231ENST00000417521 SETBP1Q9Y6X0 1596 aa24.23■■□□□ 1.47
DDR1-231ENST00000417521 MSH6P52701 1360 aa24.22■■□□□ 1.47
DDR1-231ENST00000417521 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
DDR1-231ENST00000417521 METP08581 1390 aa24.2■■□□□ 1.46
DDR1-231ENST00000417521 FAM135BQ49AJ0 1406 aa24.19■■□□□ 1.46
DDR1-231ENST00000417521 CHD2O14647 1828 aaKnown RBP24.19■■□□□ 1.46
DDR1-231ENST00000417521 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
DDR1-231ENST00000417521 KIF1BO60333 1816 aa24.17■■□□□ 1.46
DDR1-231ENST00000417521 SPATA31E1Q6ZUB1 1445 aa24.17■■□□□ 1.46
DDR1-231ENST00000417521 C14orf37Q86TY3 774 aa24.17■■□□□ 1.46
DDR1-231ENST00000417521 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
DDR1-231ENST00000417521 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
DDR1-231ENST00000417521 XIRP1Q702N8 1843 aaKnown RBP24.16■■□□□ 1.46
DDR1-231ENST00000417521 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
DDR1-231ENST00000417521 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
DDR1-231ENST00000417521 CADPS2Q86UW7 1296 aa24.13■■□□□ 1.45
DDR1-231ENST00000417521 TRIM26Q12899 539 aaPredicted RBP24.12■■□□□ 1.45
DDR1-231ENST00000417521 ATF3P18847 181 aa24.1■■□□□ 1.45
DDR1-231ENST00000417521 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
DDR1-231ENST00000417521 XRN1Q8IZH2 1706 aaKnown RBP24.05■■□□□ 1.44
DDR1-231ENST00000417521 DCCP43146 1447 aa24.04■■□□□ 1.44
DDR1-231ENST00000417521 PPLO60437 1756 aa24.02■■□□□ 1.44
DDR1-231ENST00000417521 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
DDR1-231ENST00000417521 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
DDR1-231ENST00000417521 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
DDR1-231ENST00000417521 MED1Q15648 1581 aaPredicted RBP23.99■■□□□ 1.43
DDR1-231ENST00000417521 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
DDR1-231ENST00000417521 ADGRL3Q9HAR2 1447 aa23.98■■□□□ 1.43
DDR1-231ENST00000417521 ROBO1Q9Y6N7 1651 aa23.98■■□□□ 1.43
DDR1-231ENST00000417521 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
DDR1-231ENST00000417521 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
DDR1-231ENST00000417521 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
DDR1-231ENST00000417521 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
DDR1-231ENST00000417521 STAC3Q96MF2 364 aa23.94■■□□□ 1.42
DDR1-231ENST00000417521 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
DDR1-231ENST00000417521 ABCC11Q96J66 1382 aa23.94■■□□□ 1.42
DDR1-231ENST00000417521 MYOM2P54296 1465 aa23.94■■□□□ 1.42
DDR1-231ENST00000417521 TMEM132EQ6IEE7 984 aa23.94■■□□□ 1.42
DDR1-231ENST00000417521 NRXN1Q9ULB1 1477 aa23.93■■□□□ 1.42
DDR1-231ENST00000417521 STK26Q9P289 416 aa23.93■■□□□ 1.42
DDR1-231ENST00000417521 MST1RQ04912 1400 aa23.92■■□□□ 1.42
DDR1-231ENST00000417521 TECPR2O15040 1411 aa23.91■■□□□ 1.42
DDR1-231ENST00000417521 CFAP70Q5T0N1 1121 aa23.91■■□□□ 1.42
DDR1-231ENST00000417521 IFT172Q9UG01 1749 aa23.9■■□□□ 1.42
DDR1-231ENST00000417521 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.42
DDR1-231ENST00000417521 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.42
DDR1-231ENST00000417521 SIRT1Q96EB6 747 aa23.88■■□□□ 1.41
DDR1-231ENST00000417521 JCADQ9P266 1359 aa23.88■■□□□ 1.41
DDR1-231ENST00000417521 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
DDR1-231ENST00000417521 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
DDR1-231ENST00000417521 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
DDR1-231ENST00000417521 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
DDR1-231ENST00000417521 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
DDR1-231ENST00000417521 ASXL1Q8IXJ9 1541 aa23.86■■□□□ 1.41
DDR1-231ENST00000417521 C1orf167Q5SNV9 1468 aa23.84■■□□□ 1.41
DDR1-231ENST00000417521 AHDC1Q5TGY3 1603 aaPredicted RBP23.83■■□□□ 1.41
DDR1-231ENST00000417521 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
DDR1-231ENST00000417521 PHLPP1O60346 1717 aa23.8■■□□□ 1.4
DDR1-231ENST00000417521 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms