RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 NKTRP30414 1462 aaKnown RBP33.21■■■□□ 2.91
APTR-202ENST00000416650 PPARGC1BQ86YN6 1023 aaKnown RBP33.21■■■□□ 2.91
APTR-202ENST00000416650 ITGAEP38570 1179 aa33.2■■■□□ 2.91
APTR-202ENST00000416650 RIMS2Q9UQ26 1411 aa33.19■■■□□ 2.9
APTR-202ENST00000416650 SPHKAPQ2M3C7 1700 aa33.19■■■□□ 2.9
APTR-202ENST00000416650 SLC26A8Q96RN1 970 aa33.19■■■□□ 2.9
APTR-202ENST00000416650 PLEKHG1Q9ULL1 1385 aa33.17■■■□□ 2.9
APTR-202ENST00000416650 KCNA6P17658 529 aa33.16■■■□□ 2.9
APTR-202ENST00000416650 SOCS7O14512 581 aa33.15■■■□□ 2.9
APTR-202ENST00000416650 NUP155O75694 1391 aa33.15■■■□□ 2.9
APTR-202ENST00000416650 TMEM94Q12767 1356 aa33.15■■■□□ 2.9
APTR-202ENST00000416650 RRBP1Q9P2E9 1410 aaKnown RBP33.11■■■□□ 2.89
APTR-202ENST00000416650 DIP2AQ14689 1571 aa33.1■■■□□ 2.89
APTR-202ENST00000416650 PPP1R15AO75807 674 aaPredicted RBP33.09■■■□□ 2.89
APTR-202ENST00000416650 BCANQ96GW7 911 aa33.09■■■□□ 2.89
APTR-202ENST00000416650 ROBO1Q9Y6N7 1651 aa33.09■■■□□ 2.89
APTR-202ENST00000416650 SENP3Q9H4L4 574 aaPredicted RBP33.07■■■□□ 2.88
APTR-202ENST00000416650 CHGAP10645 457 aaKnown RBP33.06■■■□□ 2.88
APTR-202ENST00000416650 HDGFP51858 240 aaKnown RBP33.06■■■□□ 2.88
APTR-202ENST00000416650 PROSER2Q86WR7 435 aaPredicted RBP33.05■■■□□ 2.88
APTR-202ENST00000416650 FAM135BQ49AJ0 1406 aa33.02■■■□□ 2.88
APTR-202ENST00000416650 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.02■■■□□ 2.88
APTR-202ENST00000416650 ADAMTS13Q76LX8 1427 aa33.01■■■□□ 2.87
APTR-202ENST00000416650 RBM33Q96EV2 1170 aaKnown RBP32.99■■■□□ 2.87
APTR-202ENST00000416650 CLTCL1P53675 1640 aa32.97■■■□□ 2.87
APTR-202ENST00000416650 TRPM2O94759 1503 aa32.97■■■□□ 2.87
APTR-202ENST00000416650 MSH6P52701 1360 aa32.96■■■□□ 2.87
APTR-202ENST00000416650 NAIPQ13075 1403 aa32.96■■■□□ 2.87
APTR-202ENST00000416650 NRXN3Q9Y4C0 1643 aa32.96■■■□□ 2.87
APTR-202ENST00000416650 KIF1BO60333 1816 aa32.96■■■□□ 2.87
APTR-202ENST00000416650 TBX22Q9Y458 520 aa32.95■■■□□ 2.87
APTR-202ENST00000416650 NUTM2DQ5VT03 806 aaPredicted RBP32.94■■■□□ 2.86
APTR-202ENST00000416650 PIK3R4Q99570 1358 aa32.92■■■□□ 2.86
APTR-202ENST00000416650 SETBP1Q9Y6X0 1596 aa32.92■■■□□ 2.86
APTR-202ENST00000416650 PHLPP1O60346 1717 aa32.91■■■□□ 2.86
APTR-202ENST00000416650 PHF23Q9BUL5 403 aaPredicted RBP32.9■■■□□ 2.86
APTR-202ENST00000416650 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.9■■■□□ 2.86
APTR-202ENST00000416650 XRN1Q8IZH2 1706 aaKnown RBP32.88■■■□□ 2.85
APTR-202ENST00000416650 NCOA3Q9Y6Q9 1424 aa32.88■■■□□ 2.85
APTR-202ENST00000416650 HFM1A2PYH4 1435 aa32.85■■■□□ 2.85
APTR-202ENST00000416650 NEXMIFQ5QGS0 1516 aa32.85■■■□□ 2.85
APTR-202ENST00000416650 PTPRUQ92729 1446 aa32.81■■■□□ 2.84
APTR-202ENST00000416650 SLAIN2Q9P270 581 aa32.79■■■□□ 2.84
APTR-202ENST00000416650 COL16A1Q07092 1604 aaPredicted RBP32.79■■■□□ 2.84
APTR-202ENST00000416650 ZNF326Q5BKZ1 582 aaKnown RBP32.76■■■□□ 2.83
APTR-202ENST00000416650 C14orf37Q86TY3 774 aa32.74■■■□□ 2.83
APTR-202ENST00000416650 AMOTL2Q9Y2J4 779 aa32.73■■■□□ 2.83
APTR-202ENST00000416650 SETD1AO15047 1707 aaKnown RBP32.73■■■□□ 2.83
APTR-202ENST00000416650 PPLO60437 1756 aa32.71■■■□□ 2.83
APTR-202ENST00000416650 AHDC1Q5TGY3 1603 aaPredicted RBP32.71■■■□□ 2.83
APTR-202ENST00000416650 DCCP43146 1447 aa32.68■■■□□ 2.82
APTR-202ENST00000416650 NALCNQ8IZF0 1738 aa32.68■■■□□ 2.82
APTR-202ENST00000416650 CADPS2Q86UW7 1296 aa32.68■■■□□ 2.82
APTR-202ENST00000416650 TRIM52Q96A61 297 aa32.68■■■□□ 2.82
APTR-202ENST00000416650 C19orf44Q9H6X5 657 aa32.68■■■□□ 2.82
APTR-202ENST00000416650 METP08581 1390 aa32.67■■■□□ 2.82
APTR-202ENST00000416650 ATF3P18847 181 aa32.65■■■□□ 2.82
APTR-202ENST00000416650 RGS17Q9UGC6 210 aaPredicted RBP32.65■■■□□ 2.82
APTR-202ENST00000416650 SHPRHQ149N8 1683 aa32.65■■■□□ 2.82
APTR-202ENST00000416650 JCADQ9P266 1359 aa32.64■■■□□ 2.82
APTR-202ENST00000416650 SLC4A1APQ9BWU0 796 aaKnown RBP32.61■■■□□ 2.81
APTR-202ENST00000416650 NHSL1Q5SYE7 1610 aa32.6■■■□□ 2.81
APTR-202ENST00000416650 ASXL1Q8IXJ9 1541 aa32.57■■■□□ 2.8
APTR-202ENST00000416650 ADGRL3Q9HAR2 1447 aa32.57■■■□□ 2.8
APTR-202ENST00000416650 IFT172Q9UG01 1749 aa32.56■■■□□ 2.8
APTR-202ENST00000416650 MST1RQ04912 1400 aa32.55■■■□□ 2.8
APTR-202ENST00000416650 PTCH1Q13635 1447 aa32.52■■■□□ 2.8
APTR-202ENST00000416650 LRP6O75581 1613 aa32.51■■■□□ 2.8
APTR-202ENST00000416650 BRINP3Q76B58 766 aa32.51■■■□□ 2.79
APTR-202ENST00000416650 VGFO15240 615 aaPredicted RBP32.5■■■□□ 2.79
APTR-202ENST00000416650 PRAG1Q86YV5 1406 aa32.5■■■□□ 2.79
APTR-202ENST00000416650 RPGRIP1LQ68CZ1 1315 aa32.5■■■□□ 2.79
APTR-202ENST00000416650 POTEAQ6S8J7 498 aa32.47■■■□□ 2.79
APTR-202ENST00000416650 SPATA31A6Q5VVP1 1343 aa32.47■■■□□ 2.79
APTR-202ENST00000416650 CCDC144AA2RUR9 1427 aa32.46■■■□□ 2.79
APTR-202ENST00000416650 FOXD1Q16676 465 aa32.45■■■□□ 2.79
APTR-202ENST00000416650 LAMC1P11047 1609 aa32.41■■■□□ 2.78
APTR-202ENST00000416650 ROBO2Q9HCK4 1378 aa32.41■■■□□ 2.78
APTR-202ENST00000416650 SPATA31E1Q6ZUB1 1445 aa32.4■■■□□ 2.78
APTR-202ENST00000416650 SETD5Q9C0A6 1442 aa32.4■■■□□ 2.78
APTR-202ENST00000416650 KNDC1Q76NI1 1749 aa32.37■■■□□ 2.77
APTR-202ENST00000416650 MPHOSPH9Q99550 1183 aa32.36■■■□□ 2.77
APTR-202ENST00000416650 C1orf167Q5SNV9 1468 aa32.35■■■□□ 2.77
APTR-202ENST00000416650 CDC42BPGQ6DT37 1551 aa32.33■■■□□ 2.77
APTR-202ENST00000416650 MEX3CQ5U5Q3 659 aaKnown RBP32.33■■■□□ 2.77
APTR-202ENST00000416650 ANKRD30BQ9BXX2 1392 aa32.3■■■□□ 2.76
APTR-202ENST00000416650 ADGRF5Q8IZF2 1346 aa32.29■■■□□ 2.76
APTR-202ENST00000416650 ACIN1Q9UKV3 1341 aaKnown RBP32.26■■■□□ 2.76
APTR-202ENST00000416650 PIK3C2GO75747 1445 aa32.26■■■□□ 2.76
APTR-202ENST00000416650 RGL3Q3MIN7 710 aa32.26■■■□□ 2.75
APTR-202ENST00000416650 DDX17Q92841 729 aaKnown RBP32.26■■■□□ 2.75
APTR-202ENST00000416650 TECPR2O15040 1411 aa32.26■■■□□ 2.75
APTR-202ENST00000416650 PNPLA6Q8IY17 1366 aa32.25■■■□□ 2.75
APTR-202ENST00000416650 LRRC59Q96AG4 307 aaKnown RBP32.25■■■□□ 2.75
APTR-202ENST00000416650 ZNF772Q68DY9 489 aaPredicted RBP32.23■■■□□ 2.75
APTR-202ENST00000416650 NUTM2BA6NNL0 878 aaPredicted RBP32.22■■■□□ 2.75
APTR-202ENST00000416650 NUTM2EB1AL46 878 aaPredicted RBP32.22■■■□□ 2.75
APTR-202ENST00000416650 NUTM2AQ8IVF1 878 aaPredicted RBP32.22■■■□□ 2.75
APTR-202ENST00000416650 LRPPRCP42704 1394 aaKnown RBP32.19■■■□□ 2.74
APTR-202ENST00000416650 FMN2Q9NZ56 1722 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms