RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
SNX30-202ENST00000416585 TMEM131LA2VDJ0 1609 aa17.44■□□□□ 0.38
SNX30-202ENST00000416585 PPP1R15AO75807 674 aaPredicted RBP17.43■□□□□ 0.38
SNX30-202ENST00000416585 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
SNX30-202ENST00000416585 NKTRP30414 1462 aaKnown RBP17.43■□□□□ 0.38
SNX30-202ENST00000416585 ROBO1Q9Y6N7 1651 aa17.42■□□□□ 0.38
SNX30-202ENST00000416585 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
SNX30-202ENST00000416585 KCNA6P17658 529 aa17.41■□□□□ 0.38
SNX30-202ENST00000416585 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
SNX30-202ENST00000416585 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
SNX30-202ENST00000416585 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
SNX30-202ENST00000416585 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
SNX30-202ENST00000416585 SPHKAPQ2M3C7 1700 aa17.39■□□□□ 0.37
SNX30-202ENST00000416585 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
SNX30-202ENST00000416585 MSH6P52701 1360 aa17.38■□□□□ 0.37
SNX30-202ENST00000416585 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
SNX30-202ENST00000416585 DIP2AQ14689 1571 aa17.37■□□□□ 0.37
SNX30-202ENST00000416585 ITGAEP38570 1179 aa17.37■□□□□ 0.37
SNX30-202ENST00000416585 PLEKHG1Q9ULL1 1385 aa17.37■□□□□ 0.37
SNX30-202ENST00000416585 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
SNX30-202ENST00000416585 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNX30-202ENST00000416585 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
SNX30-202ENST00000416585 KIF1BO60333 1816 aa17.34■□□□□ 0.37
SNX30-202ENST00000416585 NUP155O75694 1391 aa17.32■□□□□ 0.36
SNX30-202ENST00000416585 TRPM2O94759 1503 aa17.31■□□□□ 0.36
SNX30-202ENST00000416585 C14orf37Q86TY3 774 aa17.31■□□□□ 0.36
SNX30-202ENST00000416585 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
SNX30-202ENST00000416585 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.3■□□□□ 0.36
SNX30-202ENST00000416585 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
SNX30-202ENST00000416585 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
SNX30-202ENST00000416585 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
SNX30-202ENST00000416585 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
SNX30-202ENST00000416585 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
SNX30-202ENST00000416585 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
SNX30-202ENST00000416585 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
SNX30-202ENST00000416585 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
SNX30-202ENST00000416585 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
SNX30-202ENST00000416585 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
SNX30-202ENST00000416585 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
SNX30-202ENST00000416585 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
SNX30-202ENST00000416585 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
SNX30-202ENST00000416585 ATF3P18847 181 aa17.21■□□□□ 0.35
SNX30-202ENST00000416585 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
SNX30-202ENST00000416585 JCADQ9P266 1359 aa17.2■□□□□ 0.34
SNX30-202ENST00000416585 CADPS2Q86UW7 1296 aa17.2■□□□□ 0.34
SNX30-202ENST00000416585 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
SNX30-202ENST00000416585 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
SNX30-202ENST00000416585 C19orf44Q9H6X5 657 aa17.17■□□□□ 0.34
SNX30-202ENST00000416585 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
SNX30-202ENST00000416585 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
SNX30-202ENST00000416585 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
SNX30-202ENST00000416585 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
SNX30-202ENST00000416585 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
SNX30-202ENST00000416585 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
SNX30-202ENST00000416585 DCCP43146 1447 aa17.13■□□□□ 0.33
SNX30-202ENST00000416585 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
SNX30-202ENST00000416585 NHSL1Q5SYE7 1610 aa17.13■□□□□ 0.33
SNX30-202ENST00000416585 NAIPQ13075 1403 aa17.13■□□□□ 0.33
SNX30-202ENST00000416585 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
SNX30-202ENST00000416585 PPLO60437 1756 aa17.12■□□□□ 0.33
SNX30-202ENST00000416585 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
SNX30-202ENST00000416585 ASXL1Q8IXJ9 1541 aa17.1■□□□□ 0.33
SNX30-202ENST00000416585 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
SNX30-202ENST00000416585 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
SNX30-202ENST00000416585 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
SNX30-202ENST00000416585 METP08581 1390 aa17.06■□□□□ 0.32
SNX30-202ENST00000416585 LRP6O75581 1613 aa17.06■□□□□ 0.32
SNX30-202ENST00000416585 MST1RQ04912 1400 aa17.05■□□□□ 0.32
SNX30-202ENST00000416585 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
SNX30-202ENST00000416585 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
SNX30-202ENST00000416585 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
SNX30-202ENST00000416585 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
SNX30-202ENST00000416585 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
SNX30-202ENST00000416585 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
SNX30-202ENST00000416585 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
SNX30-202ENST00000416585 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
SNX30-202ENST00000416585 RPGRIP1LQ68CZ1 1315 aa17.01■□□□□ 0.31
SNX30-202ENST00000416585 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
SNX30-202ENST00000416585 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
SNX30-202ENST00000416585 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
SNX30-202ENST00000416585 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
SNX30-202ENST00000416585 LAMC1P11047 1609 aa16.97■□□□□ 0.31
SNX30-202ENST00000416585 KNDC1Q76NI1 1749 aa16.96■□□□□ 0.31
SNX30-202ENST00000416585 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
SNX30-202ENST00000416585 RXRBP28702 533 aa16.94■□□□□ 0.3
SNX30-202ENST00000416585 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
SNX30-202ENST00000416585 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
SNX30-202ENST00000416585 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
SNX30-202ENST00000416585 AFF2P51816 1311 aa16.93■□□□□ 0.3
SNX30-202ENST00000416585 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
SNX30-202ENST00000416585 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
SNX30-202ENST00000416585 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
SNX30-202ENST00000416585 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
SNX30-202ENST00000416585 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
SNX30-202ENST00000416585 FOXD1Q16676 465 aa16.9■□□□□ 0.3
SNX30-202ENST00000416585 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
SNX30-202ENST00000416585 COL22A1Q8NFW1 1626 aaPredicted RBP16.89■□□□□ 0.29
SNX30-202ENST00000416585 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
SNX30-202ENST00000416585 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
SNX30-202ENST00000416585 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms