RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
SMIM19-202ENST00000416469 NUP155O75694 1391 aa28.02■■■□□ 2.08
SMIM19-202ENST00000416469 KCNA6P17658 529 aa28.02■■■□□ 2.08
SMIM19-202ENST00000416469 NWD1Q149M9 1564 aa28.02■■■□□ 2.08
SMIM19-202ENST00000416469 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.08
SMIM19-202ENST00000416469 PLEKHG1Q9ULL1 1385 aa27.99■■■□□ 2.07
SMIM19-202ENST00000416469 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
SMIM19-202ENST00000416469 BCANQ96GW7 911 aa27.98■■■□□ 2.07
SMIM19-202ENST00000416469 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
SMIM19-202ENST00000416469 SOCS7O14512 581 aa27.97■■■□□ 2.07
SMIM19-202ENST00000416469 HDGFP51858 240 aaKnown RBP27.97■■■□□ 2.07
SMIM19-202ENST00000416469 CHD2O14647 1828 aaKnown RBP27.97■■■□□ 2.07
SMIM19-202ENST00000416469 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
SMIM19-202ENST00000416469 PPP1R15AO75807 674 aaPredicted RBP27.95■■■□□ 2.06
SMIM19-202ENST00000416469 CHGAP10645 457 aaKnown RBP27.95■■■□□ 2.06
SMIM19-202ENST00000416469 PROSER2Q86WR7 435 aaPredicted RBP27.94■■■□□ 2.06
SMIM19-202ENST00000416469 SPHKAPQ2M3C7 1700 aa27.93■■■□□ 2.06
SMIM19-202ENST00000416469 SENP3Q9H4L4 574 aaPredicted RBP27.93■■■□□ 2.06
SMIM19-202ENST00000416469 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
SMIM19-202ENST00000416469 RBM33Q96EV2 1170 aaKnown RBP27.88■■■□□ 2.05
SMIM19-202ENST00000416469 DIP2AQ14689 1571 aa27.87■■■□□ 2.05
SMIM19-202ENST00000416469 FAM135BQ49AJ0 1406 aa27.87■■■□□ 2.05
SMIM19-202ENST00000416469 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
SMIM19-202ENST00000416469 NUTM2DQ5VT03 806 aaPredicted RBP27.85■■■□□ 2.05
SMIM19-202ENST00000416469 ROBO1Q9Y6N7 1651 aa27.84■■■□□ 2.05
SMIM19-202ENST00000416469 ADAMTS13Q76LX8 1427 aa27.84■■■□□ 2.05
SMIM19-202ENST00000416469 NAIPQ13075 1403 aa27.83■■■□□ 2.05
SMIM19-202ENST00000416469 MSH6P52701 1360 aa27.82■■■□□ 2.04
SMIM19-202ENST00000416469 TRPM2O94759 1503 aa27.78■■■□□ 2.04
SMIM19-202ENST00000416469 PIK3R4Q99570 1358 aa27.78■■■□□ 2.04
SMIM19-202ENST00000416469 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
SMIM19-202ENST00000416469 CLTCL1P53675 1640 aa27.77■■■□□ 2.04
SMIM19-202ENST00000416469 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
SMIM19-202ENST00000416469 NRXN3Q9Y4C0 1643 aa27.74■■■□□ 2.03
SMIM19-202ENST00000416469 HFM1A2PYH4 1435 aa27.74■■■□□ 2.03
SMIM19-202ENST00000416469 KIF1BO60333 1816 aa27.74■■■□□ 2.03
SMIM19-202ENST00000416469 SETBP1Q9Y6X0 1596 aa27.73■■■□□ 2.03
SMIM19-202ENST00000416469 SLAIN2Q9P270 581 aa27.72■■■□□ 2.03
SMIM19-202ENST00000416469 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.7■■■□□ 2.03
SMIM19-202ENST00000416469 ZNF326Q5BKZ1 582 aaKnown RBP27.7■■■□□ 2.02
SMIM19-202ENST00000416469 PHLPP1O60346 1717 aa27.7■■■□□ 2.02
SMIM19-202ENST00000416469 PTPRUQ92729 1446 aa27.68■■■□□ 2.02
SMIM19-202ENST00000416469 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
SMIM19-202ENST00000416469 XRN1Q8IZH2 1706 aaKnown RBP27.67■■■□□ 2.02
SMIM19-202ENST00000416469 C14orf37Q86TY3 774 aa27.67■■■□□ 2.02
SMIM19-202ENST00000416469 AMOTL2Q9Y2J4 779 aa27.66■■■□□ 2.02
SMIM19-202ENST00000416469 TRIM52Q96A61 297 aa27.65■■■□□ 2.02
SMIM19-202ENST00000416469 C19orf44Q9H6X5 657 aa27.63■■■□□ 2.01
SMIM19-202ENST00000416469 CADPS2Q86UW7 1296 aa27.6■■■□□ 2.01
SMIM19-202ENST00000416469 COL16A1Q07092 1604 aaPredicted RBP27.59■■■□□ 2.01
SMIM19-202ENST00000416469 METP08581 1390 aa27.59■■■□□ 2.01
SMIM19-202ENST00000416469 ATF3P18847 181 aa27.58■■■□□ 2.01
SMIM19-202ENST00000416469 SLC4A1APQ9BWU0 796 aaKnown RBP27.58■■■□□ 2.01
SMIM19-202ENST00000416469 RGS17Q9UGC6 210 aaPredicted RBP27.57■■■□□ 2
SMIM19-202ENST00000416469 DCCP43146 1447 aa27.55■■■□□ 2
SMIM19-202ENST00000416469 AHDC1Q5TGY3 1603 aaPredicted RBP27.55■■■□□ 2
SMIM19-202ENST00000416469 JCADQ9P266 1359 aa27.54■■■□□ 2
SMIM19-202ENST00000416469 PPLO60437 1756 aa27.53■■■□□ 2
SMIM19-202ENST00000416469 SETD1AO15047 1707 aaKnown RBP27.53■■■□□ 2
SMIM19-202ENST00000416469 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
SMIM19-202ENST00000416469 NALCNQ8IZF0 1738 aa27.49■■□□□ 1.99
SMIM19-202ENST00000416469 RPGRIP1LQ68CZ1 1315 aa27.48■■□□□ 1.99
SMIM19-202ENST00000416469 SHPRHQ149N8 1683 aa27.46■■□□□ 1.99
SMIM19-202ENST00000416469 BRINP3Q76B58 766 aa27.46■■□□□ 1.99
SMIM19-202ENST00000416469 MST1RQ04912 1400 aa27.46■■□□□ 1.99
SMIM19-202ENST00000416469 ADGRL3Q9HAR2 1447 aa27.46■■□□□ 1.99
SMIM19-202ENST00000416469 FOXD1Q16676 465 aa27.44■■□□□ 1.98
SMIM19-202ENST00000416469 ASXL1Q8IXJ9 1541 aa27.44■■□□□ 1.98
SMIM19-202ENST00000416469 NHSL1Q5SYE7 1610 aa27.42■■□□□ 1.98
SMIM19-202ENST00000416469 PTCH1Q13635 1447 aa27.41■■□□□ 1.98
SMIM19-202ENST00000416469 POTEAQ6S8J7 498 aa27.41■■□□□ 1.98
SMIM19-202ENST00000416469 CCDC144AA2RUR9 1427 aa27.41■■□□□ 1.98
SMIM19-202ENST00000416469 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
SMIM19-202ENST00000416469 LRP6O75581 1613 aa27.39■■□□□ 1.98
SMIM19-202ENST00000416469 PRAG1Q86YV5 1406 aa27.39■■□□□ 1.97
SMIM19-202ENST00000416469 MPHOSPH9Q99550 1183 aa27.38■■□□□ 1.97
SMIM19-202ENST00000416469 IFT172Q9UG01 1749 aa27.38■■□□□ 1.97
SMIM19-202ENST00000416469 ROBO2Q9HCK4 1378 aa27.36■■□□□ 1.97
SMIM19-202ENST00000416469 SPATA31E1Q6ZUB1 1445 aa27.34■■□□□ 1.97
SMIM19-202ENST00000416469 SETD5Q9C0A6 1442 aa27.33■■□□□ 1.96
SMIM19-202ENST00000416469 C1orf167Q5SNV9 1468 aa27.31■■□□□ 1.96
SMIM19-202ENST00000416469 MEX3CQ5U5Q3 659 aaKnown RBP27.3■■□□□ 1.96
SMIM19-202ENST00000416469 ADGRF5Q8IZF2 1346 aa27.3■■□□□ 1.96
SMIM19-202ENST00000416469 ACIN1Q9UKV3 1341 aaKnown RBP27.3■■□□□ 1.96
SMIM19-202ENST00000416469 RGL3Q3MIN7 710 aa27.29■■□□□ 1.96
SMIM19-202ENST00000416469 LAMC1P11047 1609 aa27.28■■□□□ 1.96
SMIM19-202ENST00000416469 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
SMIM19-202ENST00000416469 DDX17Q92841 729 aaKnown RBP27.25■■□□□ 1.95
SMIM19-202ENST00000416469 LRRC59Q96AG4 307 aaKnown RBP27.25■■□□□ 1.95
SMIM19-202ENST00000416469 NUTM2BA6NNL0 878 aaPredicted RBP27.23■■□□□ 1.95
SMIM19-202ENST00000416469 NUTM2EB1AL46 878 aaPredicted RBP27.23■■□□□ 1.95
SMIM19-202ENST00000416469 NUTM2AQ8IVF1 878 aaPredicted RBP27.23■■□□□ 1.95
SMIM19-202ENST00000416469 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
SMIM19-202ENST00000416469 KNDC1Q76NI1 1749 aa27.22■■□□□ 1.95
SMIM19-202ENST00000416469 ZNF772Q68DY9 489 aaPredicted RBP27.22■■□□□ 1.95
SMIM19-202ENST00000416469 PIK3C2GO75747 1445 aa27.22■■□□□ 1.95
SMIM19-202ENST00000416469 TECPR2O15040 1411 aa27.2■■□□□ 1.94
SMIM19-202ENST00000416469 PNPLA6Q8IY17 1366 aa27.2■■□□□ 1.94
SMIM19-202ENST00000416469 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
SMIM19-202ENST00000416469 LRPPRCP42704 1394 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms