RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 NEXMIFQ5QGS0 1516 aa12□□□□□ -0.49
RBM39-208ENST00000416108 KIAA1210Q9ULL0 1709 aa12□□□□□ -0.49
RBM39-208ENST00000416108 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
RBM39-208ENST00000416108 LAMC1P11047 1609 aa11.98□□□□□ -0.49
RBM39-208ENST00000416108 UHRF1BP1Q6BDS2 1440 aa11.97□□□□□ -0.49
RBM39-208ENST00000416108 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
RBM39-208ENST00000416108 POLR1AO95602 1720 aaPredicted RBP11.96□□□□□ -0.49
RBM39-208ENST00000416108 PRAG1Q86YV5 1406 aa11.95□□□□□ -0.5
RBM39-208ENST00000416108 RIMS2Q9UQ26 1411 aa11.95□□□□□ -0.5
RBM39-208ENST00000416108 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
RBM39-208ENST00000416108 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
RBM39-208ENST00000416108 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
RBM39-208ENST00000416108 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
RBM39-208ENST00000416108 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBM39-208ENST00000416108 ZFYVE9O95405 1425 aa11.93□□□□□ -0.5
RBM39-208ENST00000416108 SLIT1O75093 1534 aa11.92□□□□□ -0.5
RBM39-208ENST00000416108 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
RBM39-208ENST00000416108 NBPF8Q3BBV2 869 aa11.92□□□□□ -0.5
RBM39-208ENST00000416108 EID1Q9Y6B2 187 aa11.92□□□□□ -0.5
RBM39-208ENST00000416108 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
RBM39-208ENST00000416108 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
RBM39-208ENST00000416108 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
RBM39-208ENST00000416108 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
RBM39-208ENST00000416108 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
RBM39-208ENST00000416108 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
RBM39-208ENST00000416108 BCANQ96GW7 911 aa11.9□□□□□ -0.5
RBM39-208ENST00000416108 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
RBM39-208ENST00000416108 SETBP1Q9Y6X0 1596 aa11.89□□□□□ -0.51
RBM39-208ENST00000416108 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
RBM39-208ENST00000416108 TXNDC2Q86VQ3 553 aa11.88□□□□□ -0.51
RBM39-208ENST00000416108 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
RBM39-208ENST00000416108 ALKQ9UM73 1620 aa11.87□□□□□ -0.51
RBM39-208ENST00000416108 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
RBM39-208ENST00000416108 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
RBM39-208ENST00000416108 DIP2AQ14689 1571 aa11.86□□□□□ -0.51
RBM39-208ENST00000416108 PLEKHG1Q9ULL1 1385 aa11.85□□□□□ -0.51
RBM39-208ENST00000416108 CFAP70Q5T0N1 1121 aa11.85□□□□□ -0.51
RBM39-208ENST00000416108 ANKLE2Q86XL3 938 aa11.85□□□□□ -0.51
RBM39-208ENST00000416108 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
RBM39-208ENST00000416108 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
RBM39-208ENST00000416108 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
RBM39-208ENST00000416108 ARHGEF28Q8N1W1 1705 aaKnown RBP11.84□□□□□ -0.51
RBM39-208ENST00000416108 EIF4G2P78344 907 aaKnown RBP eCLIP11.84□□□□□ -0.51
RBM39-208ENST00000416108 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
RBM39-208ENST00000416108 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
RBM39-208ENST00000416108 USP47Q96K76 1375 aa11.83□□□□□ -0.52
RBM39-208ENST00000416108 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
RBM39-208ENST00000416108 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
RBM39-208ENST00000416108 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
RBM39-208ENST00000416108 LTKP29376 864 aa11.82□□□□□ -0.52
RBM39-208ENST00000416108 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
RBM39-208ENST00000416108 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
RBM39-208ENST00000416108 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
RBM39-208ENST00000416108 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
RBM39-208ENST00000416108 HSPA5P11021 654 aaKnown RBP11.8□□□□□ -0.52
RBM39-208ENST00000416108 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
RBM39-208ENST00000416108 ADAMTS13Q76LX8 1427 aa11.79□□□□□ -0.52
RBM39-208ENST00000416108 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
RBM39-208ENST00000416108 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
RBM39-208ENST00000416108 MED14O60244 1454 aa11.78□□□□□ -0.52
RBM39-208ENST00000416108 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
RBM39-208ENST00000416108 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
RBM39-208ENST00000416108 HSPA2P54652 639 aa11.77□□□□□ -0.53
RBM39-208ENST00000416108 TRAK1Q9UPV9 953 aa11.77□□□□□ -0.53
RBM39-208ENST00000416108 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
RBM39-208ENST00000416108 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
RBM39-208ENST00000416108 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
RBM39-208ENST00000416108 STK26Q9P289 416 aa11.76□□□□□ -0.53
RBM39-208ENST00000416108 TBX22Q9Y458 520 aa11.76□□□□□ -0.53
RBM39-208ENST00000416108 XRN1Q8IZH2 1706 aaKnown RBP11.76□□□□□ -0.53
RBM39-208ENST00000416108 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
RBM39-208ENST00000416108 CPS1P31327 1500 aa11.76□□□□□ -0.53
RBM39-208ENST00000416108 ST20-MTHFSA0A0A6YYL1 179 aa11.75□□□□□ -0.53
RBM39-208ENST00000416108 METP08581 1390 aa11.75□□□□□ -0.53
RBM39-208ENST00000416108 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
RBM39-208ENST00000416108 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
RBM39-208ENST00000416108 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
RBM39-208ENST00000416108 POGKQ9P215 609 aa11.74□□□□□ -0.53
RBM39-208ENST00000416108 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
RBM39-208ENST00000416108 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
RBM39-208ENST00000416108 NWD1Q149M9 1564 aa11.72□□□□□ -0.53
RBM39-208ENST00000416108 TECPR2O15040 1411 aa11.72□□□□□ -0.53
RBM39-208ENST00000416108 TMF1P82094 1093 aa11.71□□□□□ -0.53
RBM39-208ENST00000416108 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
RBM39-208ENST00000416108 FAM135BQ49AJ0 1406 aa11.7□□□□□ -0.54
RBM39-208ENST00000416108 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
RBM39-208ENST00000416108 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
RBM39-208ENST00000416108 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
RBM39-208ENST00000416108 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
RBM39-208ENST00000416108 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
RBM39-208ENST00000416108 SAFB2Q14151 953 aaKnown RBP eCLIP11.69□□□□□ -0.54
RBM39-208ENST00000416108 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
RBM39-208ENST00000416108 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
RBM39-208ENST00000416108 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
RBM39-208ENST00000416108 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
RBM39-208ENST00000416108 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
RBM39-208ENST00000416108 TESK2Q96S53 571 aa11.67□□□□□ -0.54
RBM39-208ENST00000416108 NKTRP30414 1462 aaKnown RBP11.67□□□□□ -0.54
RBM39-208ENST00000416108 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
RBM39-208ENST00000416108 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms