RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 STK17AQ9UEE5 414 aa10.07□□□□□ -0.8
NCLP2-201ENST00000416078 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
NCLP2-201ENST00000416078 OATP04181 439 aa10.05□□□□□ -0.8
NCLP2-201ENST00000416078 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
NCLP2-201ENST00000416078 DNAJB2P25686 324 aa10.04□□□□□ -0.8
NCLP2-201ENST00000416078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.04□□□□□ -0.8
NCLP2-201ENST00000416078 METTL3Q86U44 580 aaKnown RBP10.04□□□□□ -0.8
NCLP2-201ENST00000416078 TSR3Q9UJK0 312 aaKnown RBP10.04□□□□□ -0.8
NCLP2-201ENST00000416078 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
NCLP2-201ENST00000416078 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
NCLP2-201ENST00000416078 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
NCLP2-201ENST00000416078 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
NCLP2-201ENST00000416078 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
NCLP2-201ENST00000416078 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
NCLP2-201ENST00000416078 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
NCLP2-201ENST00000416078 BCANQ96GW7 911 aa10.01□□□□□ -0.81
NCLP2-201ENST00000416078 WBP1LQ9NX94 342 aa10.01□□□□□ -0.81
NCLP2-201ENST00000416078 SLF2Q8IX21 1173 aa10□□□□□ -0.81
NCLP2-201ENST00000416078 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
NCLP2-201ENST00000416078 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
NCLP2-201ENST00000416078 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
NCLP2-201ENST00000416078 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
NCLP2-201ENST00000416078 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
NCLP2-201ENST00000416078 ZMYND10O75800 440 aa9.98□□□□□ -0.81
NCLP2-201ENST00000416078 ABCC9O60706 1549 aa9.97□□□□□ -0.81
NCLP2-201ENST00000416078 IRF6O14896 467 aa9.97□□□□□ -0.81
NCLP2-201ENST00000416078 BARGINQ6ZT62 677 aa9.97□□□□□ -0.81
NCLP2-201ENST00000416078 PPP4CP60510 307 aa9.96□□□□□ -0.82
NCLP2-201ENST00000416078 PHOX2BQ99453 314 aa9.96□□□□□ -0.82
NCLP2-201ENST00000416078 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
NCLP2-201ENST00000416078 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
NCLP2-201ENST00000416078 SLC4A3P48751 1232 aa9.94□□□□□ -0.82
NCLP2-201ENST00000416078 CCDC102AQ96A19 550 aa9.94□□□□□ -0.82
NCLP2-201ENST00000416078 RNF40O75150 1001 aa9.91□□□□□ -0.82
NCLP2-201ENST00000416078 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
NCLP2-201ENST00000416078 PDZRN3Q9UPQ7 1066 aa9.91□□□□□ -0.82
NCLP2-201ENST00000416078 APLP1P51693 650 aa9.9□□□□□ -0.83
NCLP2-201ENST00000416078 SLC10A3P09131 477 aa9.89□□□□□ -0.83
NCLP2-201ENST00000416078 PRR14Q9BWN1 585 aa9.89□□□□□ -0.83
NCLP2-201ENST00000416078 INSM1Q01101 510 aaPredicted RBP9.87□□□□□ -0.83
NCLP2-201ENST00000416078 NLRP7Q8WX94 980 aa9.86□□□□□ -0.83
NCLP2-201ENST00000416078 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
NCLP2-201ENST00000416078 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
NCLP2-201ENST00000416078 ACTN4O43707 911 aaKnown RBP9.85□□□□□ -0.83
NCLP2-201ENST00000416078 CFHP08603 1231 aa9.85□□□□□ -0.83
NCLP2-201ENST00000416078 KMT5BQ4FZB7 885 aa9.85□□□□□ -0.83
NCLP2-201ENST00000416078 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
NCLP2-201ENST00000416078 AMHR2Q16671 573 aa9.84□□□□□ -0.83
NCLP2-201ENST00000416078 RSPH4AQ5TD94 716 aa9.84□□□□□ -0.83
NCLP2-201ENST00000416078 KRI1Q8N9T8 703 aaKnown RBP9.84□□□□□ -0.83
NCLP2-201ENST00000416078 MTRQ99707 1265 aa9.83□□□□□ -0.84
NCLP2-201ENST00000416078 IL21Q9HBE4 155 aa9.83□□□□□ -0.84
NCLP2-201ENST00000416078 CLCN1P35523 988 aa9.82□□□□□ -0.84
NCLP2-201ENST00000416078 MDM2Q00987 491 aaPredicted RBP9.82□□□□□ -0.84
NCLP2-201ENST00000416078 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
NCLP2-201ENST00000416078 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
NCLP2-201ENST00000416078 CD46P15529 392 aa9.8□□□□□ -0.84
NCLP2-201ENST00000416078 AK7Q96M32 723 aa9.79□□□□□ -0.84
NCLP2-201ENST00000416078 PCDHB3Q9Y5E6 796 aa9.79□□□□□ -0.84
NCLP2-201ENST00000416078 GCGRP47871 477 aa9.79□□□□□ -0.84
NCLP2-201ENST00000416078 RDH13Q8NBN7 331 aa9.79□□□□□ -0.84
NCLP2-201ENST00000416078 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
NCLP2-201ENST00000416078 TRIM66O15016 1216 aa9.78□□□□□ -0.84
NCLP2-201ENST00000416078 WIPF1O43516 503 aa9.78□□□□□ -0.84
NCLP2-201ENST00000416078 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
NCLP2-201ENST00000416078 DGAT1O75907 488 aa9.76□□□□□ -0.85
NCLP2-201ENST00000416078 SUZ12Q15022 739 aaKnown RBP9.76□□□□□ -0.85
NCLP2-201ENST00000416078 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
NCLP2-201ENST00000416078 ZPR1O75312 459 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 WFS1O76024 890 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 COPS2P61201 443 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 MYT1Q01538 1121 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 SLC24A3Q9HC58 644 aa9.74□□□□□ -0.85
NCLP2-201ENST00000416078 POTECB2RU33 542 aa9.73□□□□□ -0.85
NCLP2-201ENST00000416078 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
NCLP2-201ENST00000416078 PARP9Q8IXQ6 854 aa9.72□□□□□ -0.85
NCLP2-201ENST00000416078 FUT2Q10981 343 aa9.72□□□□□ -0.85
NCLP2-201ENST00000416078 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
NCLP2-201ENST00000416078 MORN1Q5T089 497 aa9.72□□□□□ -0.85
NCLP2-201ENST00000416078 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
NCLP2-201ENST00000416078 NR1I2O75469 434 aa9.71□□□□□ -0.86
NCLP2-201ENST00000416078 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
NCLP2-201ENST00000416078 USP46P62068 366 aa9.7□□□□□ -0.86
NCLP2-201ENST00000416078 SSTR3P32745 418 aaPredicted RBP9.69□□□□□ -0.86
NCLP2-201ENST00000416078 PDE4DQ08499 809 aa9.69□□□□□ -0.86
NCLP2-201ENST00000416078 PPP1R18Q6NYC8 613 aa9.69□□□□□ -0.86
NCLP2-201ENST00000416078 FAM181BA6NEQ2 426 aa9.68□□□□□ -0.86
NCLP2-201ENST00000416078 KDM4AO75164 1064 aa9.68□□□□□ -0.86
NCLP2-201ENST00000416078 PUS10Q3MIT2 529 aaKnown RBP9.68□□□□□ -0.86
NCLP2-201ENST00000416078 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
NCLP2-201ENST00000416078 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
NCLP2-201ENST00000416078 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
NCLP2-201ENST00000416078 SALL2Q9Y467 1007 aaPredicted RBP9.67□□□□□ -0.86
NCLP2-201ENST00000416078 TLL1O43897 1013 aa9.66□□□□□ -0.86
NCLP2-201ENST00000416078 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
NCLP2-201ENST00000416078 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
NCLP2-201ENST00000416078 HOXA2O43364 376 aa9.66□□□□□ -0.86
NCLP2-201ENST00000416078 ADH1BP00325 375 aa9.66□□□□□ -0.86
NCLP2-201ENST00000416078 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms