RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TSR2Q969E8 191 aaKnown RBP15.95■□□□□ 0.14
SCN1B-202ENST00000415950 CLSTN1O94985 981 aa15.95■□□□□ 0.14
SCN1B-202ENST00000415950 HSP90B1P14625 803 aaKnown RBP15.95■□□□□ 0.14
SCN1B-202ENST00000415950 HFM1A2PYH4 1435 aa15.94■□□□□ 0.14
SCN1B-202ENST00000415950 CHMP3Q9Y3E7 222 aa15.94■□□□□ 0.14
SCN1B-202ENST00000415950 RILPL2Q969X0 211 aa15.94■□□□□ 0.14
SCN1B-202ENST00000415950 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
SCN1B-202ENST00000415950 MTHFSP49914 203 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.93■□□□□ 0.14
SCN1B-202ENST00000415950 RBM10P98175 930 aaKnown RBP15.93■□□□□ 0.14
SCN1B-202ENST00000415950 CREBRFQ8IUR6 639 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 RIPK4P57078 832 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 MCTP1Q6DN14 999 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
SCN1B-202ENST00000415950 CASKIN1Q8WXD9 1431 aa15.92■□□□□ 0.14
SCN1B-202ENST00000415950 CFAP70Q5T0N1 1121 aa15.92■□□□□ 0.14
SCN1B-202ENST00000415950 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
SCN1B-202ENST00000415950 NECTIN2Q92692 538 aa15.91■□□□□ 0.14
SCN1B-202ENST00000415950 PDE4CQ08493 712 aa15.91■□□□□ 0.14
SCN1B-202ENST00000415950 MINK1Q8N4C8 1332 aaPredicted RBP15.91■□□□□ 0.14
SCN1B-202ENST00000415950 HMOX1P09601 288 aa15.91■□□□□ 0.14
SCN1B-202ENST00000415950 R3HCC1Q9Y3T6 440 aaKnown RBP15.91■□□□□ 0.14
SCN1B-202ENST00000415950 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
SCN1B-202ENST00000415950 ST18O60284 1047 aa15.9■□□□□ 0.14
SCN1B-202ENST00000415950 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
SCN1B-202ENST00000415950 SLC12A5Q9H2X9 1139 aa15.89■□□□□ 0.13
SCN1B-202ENST00000415950 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
SCN1B-202ENST00000415950 HMMRO75330 724 aa15.89■□□□□ 0.13
SCN1B-202ENST00000415950 RUNDC1Q96C34 613 aa15.88■□□□□ 0.13
SCN1B-202ENST00000415950 HTATSF1O43719 755 aaKnown RBP15.87■□□□□ 0.13
SCN1B-202ENST00000415950 EXOSC9Q06265 439 aaKnown RBP15.87■□□□□ 0.13
SCN1B-202ENST00000415950 CCDC9Q9Y3X0 531 aaKnown RBP15.87■□□□□ 0.13
SCN1B-202ENST00000415950 MRE11P49959 708 aa15.87■□□□□ 0.13
SCN1B-202ENST00000415950 GORABQ5T7V8 394 aa15.87■□□□□ 0.13
SCN1B-202ENST00000415950 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
SCN1B-202ENST00000415950 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
SCN1B-202ENST00000415950 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
SCN1B-202ENST00000415950 CAVIN1Q6NZI2 390 aaKnown RBP15.87■□□□□ 0.13
SCN1B-202ENST00000415950 TOPBP1Q92547 1522 aa15.87■□□□□ 0.13
SCN1B-202ENST00000415950 TERF2IPQ9NYB0 399 aa15.86■□□□□ 0.13
SCN1B-202ENST00000415950 EIF3AQ14152 1382 aaKnown RBP15.86■□□□□ 0.13
SCN1B-202ENST00000415950 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
SCN1B-202ENST00000415950 NASPP49321 788 aaPredicted RBP15.86■□□□□ 0.13
SCN1B-202ENST00000415950 MAPKBP1O60336 1514 aa15.84■□□□□ 0.13
SCN1B-202ENST00000415950 MCM4P33991 863 aa15.84■□□□□ 0.13
SCN1B-202ENST00000415950 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
SCN1B-202ENST00000415950 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
SCN1B-202ENST00000415950 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
SCN1B-202ENST00000415950 NOC3LQ8WTT2 800 aaKnown RBP15.84■□□□□ 0.13
SCN1B-202ENST00000415950 WASHC2CQ9Y4E1 1318 aa15.84■□□□□ 0.13
SCN1B-202ENST00000415950 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
SCN1B-202ENST00000415950 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
SCN1B-202ENST00000415950 SKOR2Q2VWA4 1001 aaPredicted RBP15.84■□□□□ 0.13
SCN1B-202ENST00000415950 ZNF592Q92610 1267 aa15.83■□□□□ 0.13
SCN1B-202ENST00000415950 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
SCN1B-202ENST00000415950 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCN1B-202ENST00000415950 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
SCN1B-202ENST00000415950 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
SCN1B-202ENST00000415950 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
SCN1B-202ENST00000415950 CSB-PGBD3P0DP91 1061 aa15.81■□□□□ 0.12
SCN1B-202ENST00000415950 CUX1P39880 1505 aa15.81■□□□□ 0.12
SCN1B-202ENST00000415950 TPM4P67936 248 aa15.81■□□□□ 0.12
SCN1B-202ENST00000415950 TOMM22Q9NS69 142 aa15.81■□□□□ 0.12
SCN1B-202ENST00000415950 PRPF40AO75400 957 aaKnown RBP15.8■□□□□ 0.12
SCN1B-202ENST00000415950 IGHDP01880 384 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 PHF14O94880 888 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 PDE3AQ14432 1141 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 RASSF8Q8NHQ8 419 aa15.8■□□□□ 0.12
SCN1B-202ENST00000415950 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
SCN1B-202ENST00000415950 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 ESPNB1AK53 854 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 PKNOX2Q96KN3 472 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 NOB1Q9ULX3 412 aaKnown RBP15.79■□□□□ 0.12
SCN1B-202ENST00000415950 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
SCN1B-202ENST00000415950 BECN2A8MW95 431 aa15.78■□□□□ 0.12
SCN1B-202ENST00000415950 NCOA1Q15788 1441 aa15.78■□□□□ 0.12
SCN1B-202ENST00000415950 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
SCN1B-202ENST00000415950 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
SCN1B-202ENST00000415950 CSPP1Q1MSJ5 1256 aa15.77■□□□□ 0.12
SCN1B-202ENST00000415950 GOLGA6L1Q8N7Z2 621 aa15.77■□□□□ 0.12
SCN1B-202ENST00000415950 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
SCN1B-202ENST00000415950 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.12
SCN1B-202ENST00000415950 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
SCN1B-202ENST00000415950 GPATCH3Q96I76 525 aa15.77■□□□□ 0.12
SCN1B-202ENST00000415950 PANK2Q9BZ23 570 aa15.77■□□□□ 0.12
SCN1B-202ENST00000415950 TAF7LQ5H9L4 462 aa15.77■□□□□ 0.11
SCN1B-202ENST00000415950 DUSP27Q5VZP5 1158 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 GOLGA6L19H0YKK7 550 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 HDGFP51858 240 aaKnown RBP15.76■□□□□ 0.11
SCN1B-202ENST00000415950 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 KIAA1107Q9UPP5 1409 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 WWC1Q8IX03 1113 aa15.76■□□□□ 0.11
SCN1B-202ENST00000415950 H3BQV1 296 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms