RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ZFYVE9O95405 1425 aa23.97■■□□□ 1.43
DDX56-202ENST00000415758 RBM33Q96EV2 1170 aaKnown RBP23.97■■□□□ 1.43
DDX56-202ENST00000415758 ANKRD50Q9ULJ7 1429 aa23.97■■□□□ 1.43
DDX56-202ENST00000415758 MSH6P52701 1360 aa23.94■■□□□ 1.42
DDX56-202ENST00000415758 PLEKHG1Q9ULL1 1385 aa23.94■■□□□ 1.42
DDX56-202ENST00000415758 HDGFP51858 240 aaKnown RBP23.94■■□□□ 1.42
DDX56-202ENST00000415758 CHD2O14647 1828 aaKnown RBP23.94■■□□□ 1.42
DDX56-202ENST00000415758 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
DDX56-202ENST00000415758 BCANQ96GW7 911 aa23.92■■□□□ 1.42
DDX56-202ENST00000415758 MYO5BQ9ULV0 1848 aa23.91■■□□□ 1.42
DDX56-202ENST00000415758 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
DDX56-202ENST00000415758 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
DDX56-202ENST00000415758 TMEM131LA2VDJ0 1609 aa23.91■■□□□ 1.42
DDX56-202ENST00000415758 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
DDX56-202ENST00000415758 RIMS2Q9UQ26 1411 aa23.9■■□□□ 1.42
DDX56-202ENST00000415758 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.41
DDX56-202ENST00000415758 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.41
DDX56-202ENST00000415758 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
DDX56-202ENST00000415758 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.86■■□□□ 1.41
DDX56-202ENST00000415758 UNC13BO14795 1591 aa23.85■■□□□ 1.41
DDX56-202ENST00000415758 PHLPP1O60346 1717 aa23.84■■□□□ 1.41
DDX56-202ENST00000415758 JCADQ9P266 1359 aa23.84■■□□□ 1.41
DDX56-202ENST00000415758 PIK3R4Q99570 1358 aa23.81■■□□□ 1.4
DDX56-202ENST00000415758 ADAMTS13Q76LX8 1427 aa23.81■■□□□ 1.4
DDX56-202ENST00000415758 E9PCH4 1651 aa23.8■■□□□ 1.4
DDX56-202ENST00000415758 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
DDX56-202ENST00000415758 DIP2AQ14689 1571 aa23.79■■□□□ 1.4
DDX56-202ENST00000415758 COL16A1Q07092 1604 aaPredicted RBP23.79■■□□□ 1.4
DDX56-202ENST00000415758 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
DDX56-202ENST00000415758 CHGAP10645 457 aaKnown RBP23.77■■□□□ 1.4
DDX56-202ENST00000415758 IQGAP3Q86VI3 1631 aa23.77■■□□□ 1.4
DDX56-202ENST00000415758 CADPS2Q86UW7 1296 aa23.76■■□□□ 1.39
DDX56-202ENST00000415758 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
DDX56-202ENST00000415758 SPATA31A6Q5VVP1 1343 aa23.74■■□□□ 1.39
DDX56-202ENST00000415758 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
DDX56-202ENST00000415758 C14orf37Q86TY3 774 aa23.72■■□□□ 1.39
DDX56-202ENST00000415758 AHDC1Q5TGY3 1603 aaPredicted RBP23.72■■□□□ 1.39
DDX56-202ENST00000415758 ATF3P18847 181 aa23.71■■□□□ 1.39
DDX56-202ENST00000415758 TRPM2O94759 1503 aa23.7■■□□□ 1.38
DDX56-202ENST00000415758 NUP155O75694 1391 aa23.7■■□□□ 1.38
DDX56-202ENST00000415758 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
DDX56-202ENST00000415758 LRP6O75581 1613 aa23.68■■□□□ 1.38
DDX56-202ENST00000415758 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
DDX56-202ENST00000415758 SHPRHQ149N8 1683 aa23.67■■□□□ 1.38
DDX56-202ENST00000415758 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
DDX56-202ENST00000415758 DCCP43146 1447 aa23.65■■□□□ 1.38
DDX56-202ENST00000415758 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.38
DDX56-202ENST00000415758 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
DDX56-202ENST00000415758 SETBP1Q9Y6X0 1596 aa23.62■■□□□ 1.37
DDX56-202ENST00000415758 NRXN3Q9Y4C0 1643 aa23.62■■□□□ 1.37
DDX56-202ENST00000415758 MEX3CQ5U5Q3 659 aaKnown RBP23.61■■□□□ 1.37
DDX56-202ENST00000415758 XRN1Q8IZH2 1706 aaKnown RBP23.61■■□□□ 1.37
DDX56-202ENST00000415758 SPHKAPQ2M3C7 1700 aa23.58■■□□□ 1.37
DDX56-202ENST00000415758 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
DDX56-202ENST00000415758 ASXL1Q8IXJ9 1541 aa23.56■■□□□ 1.36
DDX56-202ENST00000415758 ITGAEP38570 1179 aa23.56■■□□□ 1.36
DDX56-202ENST00000415758 MST1RQ04912 1400 aa23.56■■□□□ 1.36
DDX56-202ENST00000415758 METP08581 1390 aa23.55■■□□□ 1.36
DDX56-202ENST00000415758 UPF1Q92900 1129 aaKnown RBP eCLIP23.54■■□□□ 1.36
DDX56-202ENST00000415758 RXRBP28702 533 aa23.53■■□□□ 1.36
DDX56-202ENST00000415758 ZNF326Q5BKZ1 582 aaKnown RBP23.53■■□□□ 1.36
DDX56-202ENST00000415758 NHSL1Q5SYE7 1610 aa23.52■■□□□ 1.36
DDX56-202ENST00000415758 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
DDX56-202ENST00000415758 CDK12Q9NYV4 1490 aaPredicted RBP23.51■■□□□ 1.35
DDX56-202ENST00000415758 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
DDX56-202ENST00000415758 NUTM2BA6NNL0 878 aaPredicted RBP23.5■■□□□ 1.35
DDX56-202ENST00000415758 NUTM2EB1AL46 878 aaPredicted RBP23.5■■□□□ 1.35
DDX56-202ENST00000415758 NUTM2AQ8IVF1 878 aaPredicted RBP23.5■■□□□ 1.35
DDX56-202ENST00000415758 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
DDX56-202ENST00000415758 NEXMIFQ5QGS0 1516 aa23.49■■□□□ 1.35
DDX56-202ENST00000415758 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
DDX56-202ENST00000415758 AFF2P51816 1311 aa23.46■■□□□ 1.35
DDX56-202ENST00000415758 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
DDX56-202ENST00000415758 PNPLA6Q8IY17 1366 aa23.43■■□□□ 1.34
DDX56-202ENST00000415758 KIF1BO60333 1816 aa23.43■■□□□ 1.34
DDX56-202ENST00000415758 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
DDX56-202ENST00000415758 LAMC1P11047 1609 aa23.41■■□□□ 1.34
DDX56-202ENST00000415758 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
DDX56-202ENST00000415758 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
DDX56-202ENST00000415758 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
DDX56-202ENST00000415758 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
DDX56-202ENST00000415758 RBM6P78332 1123 aaKnown RBP23.38■■□□□ 1.33
DDX56-202ENST00000415758 C8orf37Q96NL8 207 aa23.38■■□□□ 1.33
DDX56-202ENST00000415758 QTRT2Q9H974 415 aaKnown RBP23.38■■□□□ 1.33
DDX56-202ENST00000415758 NAIPQ13075 1403 aa23.38■■□□□ 1.33
DDX56-202ENST00000415758 PRAG1Q86YV5 1406 aa23.38■■□□□ 1.33
DDX56-202ENST00000415758 RRBP1Q9P2E9 1410 aaKnown RBP23.37■■□□□ 1.33
DDX56-202ENST00000415758 SOS2Q07890 1332 aaPredicted RBP23.35■■□□□ 1.33
DDX56-202ENST00000415758 RPGRIP1LQ68CZ1 1315 aa23.35■■□□□ 1.33
DDX56-202ENST00000415758 ROBO2Q9HCK4 1378 aa23.35■■□□□ 1.33
DDX56-202ENST00000415758 RGS12O14924 1447 aa23.33■■□□□ 1.33
DDX56-202ENST00000415758 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
DDX56-202ENST00000415758 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
DDX56-202ENST00000415758 HFM1A2PYH4 1435 aa23.29■■□□□ 1.32
DDX56-202ENST00000415758 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
DDX56-202ENST00000415758 PPLO60437 1756 aa23.27■■□□□ 1.32
DDX56-202ENST00000415758 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
DDX56-202ENST00000415758 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
DDX56-202ENST00000415758 COL22A1Q8NFW1 1626 aaPredicted RBP23.25■■□□□ 1.31
DDX56-202ENST00000415758 USP21Q9UK80 565 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms