RNA–Protein interactions for RNA: ENST00000415082.1

SMIM2-IT1-201, SMIM2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMIM2-IT1, Length 478 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM2-IT1-201ENST00000415082 CCDC180Q9P1Z9 1646 aa11.15□□□□□ -0.62
SMIM2-IT1-201ENST00000415082 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 NBPF3Q9H094 633 aa11.13□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 SLC10A3P09131 477 aa11.12□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 CLCN1P35523 988 aa11.12□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 FAM117AQ9C073 453 aa11.12□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 SPNS2Q8IVW8 549 aa11.1□□□□□ -0.63
SMIM2-IT1-201ENST00000415082 BCAMP50895 628 aa11.08□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 CD46P15529 392 aa11.06□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 WNT2BQ93097 391 aa11.05□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
SMIM2-IT1-201ENST00000415082 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 THSD4Q6ZMP0 1018 aa11.01□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 ANKK1Q8NFD2 765 aa11.01□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 LRCH3Q96II8 777 aa11.01□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 MYT1LQ9UL68 1186 aa11□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 GCGRP47871 477 aa10.99□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 SLF2Q8IX21 1173 aa10.98□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 RNF40O75150 1001 aa10.97□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 APLP1P51693 650 aa10.96□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
SMIM2-IT1-201ENST00000415082 HLA-CQ95604 372 aa10.95□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 CFHP08603 1231 aa10.94□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 TBC1D2Q9BYX2 928 aa10.94□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 PTPN5P54829 565 aa10.93□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 PPP4CP60510 307 aa10.93□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 NDUFV2P19404 249 aa10.91□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 FUT2Q10981 343 aa10.91□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 MYSM1Q5VVJ2 828 aa10.91□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 KDM4AO75164 1064 aa10.9□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 RNF166Q96A37 237 aaPredicted RBP10.9□□□□□ -0.66
SMIM2-IT1-201ENST00000415082 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 GUCA2AQ02747 115 aa10.89□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 ACTN4O43707 911 aaKnown RBP10.88□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 PUS10Q3MIT2 529 aaKnown RBP10.88□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 LIMD1Q9UGP4 676 aa10.88□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 HOXA2O43364 376 aa10.87□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 MORN1Q5T089 497 aa10.85□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
SMIM2-IT1-201ENST00000415082 SPTLC1O15269 473 aa10.83□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 RIC3Q7Z5B4 369 aa10.83□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 KMT5BQ4FZB7 885 aa10.82□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 BLOC1S3Q6QNY0 202 aa10.82□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 SLC27A5Q9Y2P5 690 aa10.82□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 USP46P62068 366 aa10.81□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 QPCTQ16769 361 aa10.8□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 TJAP1Q5JTD0 557 aa10.8□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 CLK2P49760 499 aaKnown RBP10.79□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 RSPH6AQ9H0K4 717 aa10.79□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 FDX1P10109 184 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 COPS2P61201 443 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 SCUBE3Q8IX30 993 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 THAP11Q96EK4 314 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 PCDHB3Q9Y5E6 796 aa10.78□□□□□ -0.68
SMIM2-IT1-201ENST00000415082 CABLES1Q8TDN4 633 aa10.77□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 MTRQ99707 1265 aa10.77□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 GJA5P36382 358 aa10.76□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 CSPP1Q1MSJ5 1256 aa10.76□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 RTL5Q5HYW3 569 aaPredicted RBP10.76□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
SMIM2-IT1-201ENST00000415082 LILRB3O75022 631 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms