RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 LRP5O75197 1615 aa0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 THSD7BQ9C0I4 1608 aa0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 PRRC2CQ9Y520 2896 aaKnown RBP0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 ERBB4Q15303 1308 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 FAM186AA6NE01 2351 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 LOC101059948A0A1B0GTJ6 334 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 ENO4A6NNW6 628 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 PPP1R37O75864 691 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 LORP23490 312 aaPredicted RBP0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 ITGB8P26012 769 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 FEZF2Q8TBJ5 459 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 RUNDC1Q96C34 613 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 DDX50Q9BQ39 737 aaKnown RBP0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 REPIN1Q9BWE0 567 aaKnown RBP0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRTAP4-3Q9BYR4 195 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 SPTBN5Q9NRC6 3674 aaKnown RBP0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 MUC6Q6W4X9 2439 aa0.45□□□□□ -2.34
SNX3P1X-201ENST00000414887 ZFHX3Q15911 3703 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 DCAF8L1A6NGE4 600 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 EGFRP00533 1210 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRTAP5-1Q6L8H4 278 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 ERMP1Q7Z2K6 904 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 LSM14AQ8ND56 463 aaKnown RBP0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 CRELD1Q96HD1 420 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 ABHD8Q96I13 439 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 CNTNAP3BQ96NU0 1288 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 CNTNAP3Q9BZ76 1288 aa0.44□□□□□ -2.34
SNX3P1X-201ENST00000414887 CUX2O14529 1486 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 PIEZO2Q9H5I5 2752 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 DSPP15924 2871 aaKnown RBP0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 LCHNA4D1U4 455 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 POU3F2P20265 443 aaPredicted RBP0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 SRSF11Q05519 484 aaKnown RBP0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 PRR23BQ6ZRT6 265 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRTAP1-3Q8IUG1 177 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 SH2B1Q9NRF2 756 aaPredicted RBP0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 CEP290O15078 2479 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 MUC12Q9UKN1 5478 aa0.43□□□□□ -2.34
SNX3P1X-201ENST00000414887 C5orf42Q9H799 3197 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 NEURL4Q96JN8 1562 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 MST1RQ04912 1400 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRT1P04264 644 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 PABPN1Q86U42 306 aaKnown RBP eCLIP0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 PROM2Q8N271 834 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 MUC3AQ02505 3323 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 DCHS1Q96JQ0 3298 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 SPTA1P02549 2419 aa0.42□□□□□ -2.34
SNX3P1X-201ENST00000414887 ERBB3P21860 1342 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 CNTNAP4Q9C0A0 1308 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 ADAMTS7Q9UKP4 1686 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 TMEM265A0A087WTH1 108 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 NTRK1P04629 796 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 PTPN5P54829 565 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 SRSF1Q07955 248 aaKnown RBP eCLIP0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 POTEAQ6S8J7 498 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRTAP5-2Q701N4 177 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 POM121Q96HA1 1249 aa0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 COL17A1Q9UMD9 1497 aaPredicted RBP0.41□□□□□ -2.34
SNX3P1X-201ENST00000414887 ASPMQ8IZT6 3477 aa0.4□□□□□ -2.34
SNX3P1X-201ENST00000414887 PTCH1Q13635 1447 aa0.4□□□□□ -2.34
SNX3P1X-201ENST00000414887 ITPR2Q14571 2701 aa0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 NBEAQ8NFP9 2946 aa0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 PPP1R11O60927 126 aaPredicted RBP0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 LCE2CQ5TA81 110 aa0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 SORCS1Q8WY21 1168 aa0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 AVENQ9NQS1 362 aaPredicted RBP0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 NF1P21359 2839 aa0.4□□□□□ -2.35
SNX3P1X-201ENST00000414887 BRCA2P51587 3418 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 KIF7Q2M1P5 1343 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 FAT3Q8TDW7 4589 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 LOC100996750A0A140TA64 210 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 DGKQP52824 942 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 BICRAQ9NZM4 1560 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 USP34Q70CQ2 3546 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 WNK1Q9H4A3 2382 aa0.39□□□□□ -2.35
SNX3P1X-201ENST00000414887 FHOD3Q2V2M9 1422 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 KDM5CP41229 1560 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 CCDC85CA6NKD9 419 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 MAP3K13O43283 966 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 NCLP19338 710 aaKnown RBP0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 APLP1P51693 650 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 ST3GAL2Q16842 350 aa0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 CDCA7Q9BWT1 371 aaPredicted RBP0.38□□□□□ -2.35
SNX3P1X-201ENST00000414887 CEP164Q9UPV0 1460 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 HSPA1AP0DMV8 641 aaKnown RBP0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 HSPA1BP0DMV9 641 aaKnown RBP0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 HOXA10P31260 410 aaPredicted RBP0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 SREBF2Q12772 1141 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 KLRG1Q96E93 195 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 FBXL18Q96ME1 805 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 LSM14BQ9BX40 385 aaKnown RBP0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 KRTAP4-8Q9BYQ9 185 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 TNMDQ9H2S6 317 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 HCN4Q9Y3Q4 1203 aa0.37□□□□□ -2.35
SNX3P1X-201ENST00000414887 COL3A1P02461 1466 aaPredicted RBP0.36□□□□□ -2.35
SNX3P1X-201ENST00000414887 POTEB3A0JP26 581 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms