RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 ANKRD50Q9ULJ7 1429 aa33.36■■■□□ 2.93
RHBDD3-204ENST00000414672 HDGFP51858 240 aaKnown RBP33.33■■■□□ 2.93
RHBDD3-204ENST00000414672 MSH6P52701 1360 aa33.31■■■□□ 2.92
RHBDD3-204ENST00000414672 RPRD2Q5VT52 1461 aaKnown RBP33.3■■■□□ 2.92
RHBDD3-204ENST00000414672 CHGAP10645 457 aaKnown RBP33.29■■■□□ 2.92
RHBDD3-204ENST00000414672 NKTRP30414 1462 aaKnown RBP33.29■■■□□ 2.92
RHBDD3-204ENST00000414672 ROBO1Q9Y6N7 1651 aa33.27■■■□□ 2.92
RHBDD3-204ENST00000414672 SLAIN2Q9P270 581 aa33.27■■■□□ 2.92
RHBDD3-204ENST00000414672 RIMS2Q9UQ26 1411 aa33.26■■■□□ 2.91
RHBDD3-204ENST00000414672 PLEKHG1Q9ULL1 1385 aa33.25■■■□□ 2.91
RHBDD3-204ENST00000414672 NWD1Q149M9 1564 aa33.23■■■□□ 2.91
RHBDD3-204ENST00000414672 ZFYVE9O95405 1425 aa33.22■■■□□ 2.91
RHBDD3-204ENST00000414672 POTEAQ6S8J7 498 aa33.21■■■□□ 2.91
RHBDD3-204ENST00000414672 C14orf37Q86TY3 774 aa33.2■■■□□ 2.91
RHBDD3-204ENST00000414672 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.2■■■□□ 2.91
RHBDD3-204ENST00000414672 NUTM2DQ5VT03 806 aaPredicted RBP33.19■■■□□ 2.9
RHBDD3-204ENST00000414672 TBX22Q9Y458 520 aa33.18■■■□□ 2.9
RHBDD3-204ENST00000414672 GCC2Q8IWJ2 1684 aa33.15■■■□□ 2.9
RHBDD3-204ENST00000414672 MYO5BQ9ULV0 1848 aa33.14■■■□□ 2.9
RHBDD3-204ENST00000414672 TMEM131LA2VDJ0 1609 aa33.13■■■□□ 2.89
RHBDD3-204ENST00000414672 JCADQ9P266 1359 aa33.11■■■□□ 2.89
RHBDD3-204ENST00000414672 CHD2O14647 1828 aaKnown RBP33.1■■■□□ 2.89
RHBDD3-204ENST00000414672 PHLPP1O60346 1717 aa33.08■■■□□ 2.89
RHBDD3-204ENST00000414672 UNC13BO14795 1591 aa33.08■■■□□ 2.89
RHBDD3-204ENST00000414672 ITGAEP38570 1179 aa33.07■■■□□ 2.88
RHBDD3-204ENST00000414672 NCOA3Q9Y6Q9 1424 aa33.05■■■□□ 2.88
RHBDD3-204ENST00000414672 ATF3P18847 181 aa33.05■■■□□ 2.88
RHBDD3-204ENST00000414672 ROCK1Q13464 1354 aa33.05■■■□□ 2.88
RHBDD3-204ENST00000414672 CADPS2Q86UW7 1296 aa33.04■■■□□ 2.88
RHBDD3-204ENST00000414672 NUP155O75694 1391 aa33.04■■■□□ 2.88
RHBDD3-204ENST00000414672 ADAMTS13Q76LX8 1427 aa33.03■■■□□ 2.88
RHBDD3-204ENST00000414672 C19orf44Q9H6X5 657 aa33.03■■■□□ 2.88
RHBDD3-204ENST00000414672 E9PCH4 1651 aa33.03■■■□□ 2.88
RHBDD3-204ENST00000414672 MEX3CQ5U5Q3 659 aaKnown RBP33■■■□□ 2.87
RHBDD3-204ENST00000414672 PIK3R4Q99570 1358 aa32.99■■■□□ 2.87
RHBDD3-204ENST00000414672 AMOTL2Q9Y2J4 779 aa32.99■■■□□ 2.87
RHBDD3-204ENST00000414672 DIP2AQ14689 1571 aa32.96■■■□□ 2.87
RHBDD3-204ENST00000414672 IQGAP3Q86VI3 1631 aa32.96■■■□□ 2.87
RHBDD3-204ENST00000414672 SPATA31A6Q5VVP1 1343 aa32.95■■■□□ 2.86
RHBDD3-204ENST00000414672 COL16A1Q07092 1604 aaPredicted RBP32.94■■■□□ 2.86
RHBDD3-204ENST00000414672 TRPM2O94759 1503 aa32.92■■■□□ 2.86
RHBDD3-204ENST00000414672 ZNF326Q5BKZ1 582 aaKnown RBP32.91■■■□□ 2.86
RHBDD3-204ENST00000414672 PPARGC1BQ86YN6 1023 aaKnown RBP32.91■■■□□ 2.86
RHBDD3-204ENST00000414672 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.91■■■□□ 2.86
RHBDD3-204ENST00000414672 PTPRUQ92729 1446 aa32.88■■■□□ 2.85
RHBDD3-204ENST00000414672 ZNF772Q68DY9 489 aaPredicted RBP32.87■■■□□ 2.85
RHBDD3-204ENST00000414672 BRINP3Q76B58 766 aa32.87■■■□□ 2.85
RHBDD3-204ENST00000414672 LRP6O75581 1613 aa32.86■■■□□ 2.85
RHBDD3-204ENST00000414672 AHDC1Q5TGY3 1603 aaPredicted RBP32.84■■■□□ 2.85
RHBDD3-204ENST00000414672 NUTM2BA6NNL0 878 aaPredicted RBP32.83■■■□□ 2.85
RHBDD3-204ENST00000414672 NUTM2EB1AL46 878 aaPredicted RBP32.83■■■□□ 2.85
RHBDD3-204ENST00000414672 NUTM2AQ8IVF1 878 aaPredicted RBP32.83■■■□□ 2.85
RHBDD3-204ENST00000414672 SETD1AO15047 1707 aaKnown RBP32.82■■■□□ 2.84
RHBDD3-204ENST00000414672 TRIM52Q96A61 297 aa32.81■■■□□ 2.84
RHBDD3-204ENST00000414672 DCCP43146 1447 aa32.77■■■□□ 2.84
RHBDD3-204ENST00000414672 METP08581 1390 aa32.75■■■□□ 2.83
RHBDD3-204ENST00000414672 SHPRHQ149N8 1683 aa32.75■■■□□ 2.83
RHBDD3-204ENST00000414672 SETBP1Q9Y6X0 1596 aa32.74■■■□□ 2.83
RHBDD3-204ENST00000414672 RXRBP28702 533 aa32.73■■■□□ 2.83
RHBDD3-204ENST00000414672 SPHKAPQ2M3C7 1700 aa32.72■■■□□ 2.83
RHBDD3-204ENST00000414672 NRXN3Q9Y4C0 1643 aa32.71■■■□□ 2.83
RHBDD3-204ENST00000414672 ASXL1Q8IXJ9 1541 aa32.71■■■□□ 2.83
RHBDD3-204ENST00000414672 XRN1Q8IZH2 1706 aaKnown RBP32.7■■■□□ 2.83
RHBDD3-204ENST00000414672 MST1RQ04912 1400 aa32.69■■■□□ 2.82
RHBDD3-204ENST00000414672 LRRC59Q96AG4 307 aaKnown RBP32.69■■■□□ 2.82
RHBDD3-204ENST00000414672 UPF1Q92900 1129 aaKnown RBP eCLIP32.67■■■□□ 2.82
RHBDD3-204ENST00000414672 DDX17Q92841 729 aaKnown RBP32.65■■■□□ 2.82
RHBDD3-204ENST00000414672 AFF2P51816 1311 aa32.65■■■□□ 2.82
RHBDD3-204ENST00000414672 SETD5Q9C0A6 1442 aa32.65■■■□□ 2.82
RHBDD3-204ENST00000414672 ADGRL3Q9HAR2 1447 aa32.63■■■□□ 2.81
RHBDD3-204ENST00000414672 CLTCL1P53675 1640 aa32.6■■■□□ 2.81
RHBDD3-204ENST00000414672 C8orf37Q96NL8 207 aa32.6■■■□□ 2.81
RHBDD3-204ENST00000414672 NEXMIFQ5QGS0 1516 aa32.59■■■□□ 2.81
RHBDD3-204ENST00000414672 VGFO15240 615 aaPredicted RBP32.57■■■□□ 2.8
RHBDD3-204ENST00000414672 NHSL1Q5SYE7 1610 aa32.56■■■□□ 2.8
RHBDD3-204ENST00000414672 PNPLA6Q8IY17 1366 aa32.54■■■□□ 2.8
RHBDD3-204ENST00000414672 QTRT2Q9H974 415 aaKnown RBP32.53■■■□□ 2.8
RHBDD3-204ENST00000414672 NAIPQ13075 1403 aa32.52■■■□□ 2.8
RHBDD3-204ENST00000414672 CDK12Q9NYV4 1490 aaPredicted RBP32.52■■■□□ 2.8
RHBDD3-204ENST00000414672 C1orf167Q5SNV9 1468 aa32.51■■■□□ 2.79
RHBDD3-204ENST00000414672 ADAMTS2O95450 1211 aa32.51■■■□□ 2.79
RHBDD3-204ENST00000414672 KIF1BO60333 1816 aa32.5■■■□□ 2.79
RHBDD3-204ENST00000414672 NGLY1Q96IV0 654 aa32.5■■■□□ 2.79
RHBDD3-204ENST00000414672 NALCNQ8IZF0 1738 aa32.5■■■□□ 2.79
RHBDD3-204ENST00000414672 RBM6P78332 1123 aaKnown RBP32.48■■■□□ 2.79
RHBDD3-204ENST00000414672 ORAI2Q96SN7 254 aa32.48■■■□□ 2.79
RHBDD3-204ENST00000414672 RRBP1Q9P2E9 1410 aaKnown RBP32.48■■■□□ 2.79
RHBDD3-204ENST00000414672 ROBO2Q9HCK4 1378 aa32.47■■■□□ 2.79
RHBDD3-204ENST00000414672 SLC4A1APQ9BWU0 796 aaKnown RBP32.47■■■□□ 2.79
RHBDD3-204ENST00000414672 RPGRIP1LQ68CZ1 1315 aa32.46■■■□□ 2.79
RHBDD3-204ENST00000414672 PTCH1Q13635 1447 aa32.45■■■□□ 2.79
RHBDD3-204ENST00000414672 SOS2Q07890 1332 aaPredicted RBP32.4■■■□□ 2.78
RHBDD3-204ENST00000414672 RGS12O14924 1447 aa32.4■■■□□ 2.78
RHBDD3-204ENST00000414672 USP21Q9UK80 565 aa32.36■■■□□ 2.77
RHBDD3-204ENST00000414672 HFM1A2PYH4 1435 aa32.35■■■□□ 2.77
RHBDD3-204ENST00000414672 ESCO1Q5FWF5 840 aa32.34■■■□□ 2.77
RHBDD3-204ENST00000414672 FOXD1Q16676 465 aa32.33■■■□□ 2.77
RHBDD3-204ENST00000414672 TRPC5Q9UL62 973 aaPredicted RBP32.31■■■□□ 2.76
RHBDD3-204ENST00000414672 PRAG1Q86YV5 1406 aa32.3■■■□□ 2.76
RHBDD3-204ENST00000414672 LAMC1P11047 1609 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms