RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 PDE4AP27815 886 aa17.69■□□□□ 0.42
LINC00887-202ENST00000414120 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
LINC00887-202ENST00000414120 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
LINC00887-202ENST00000414120 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
LINC00887-202ENST00000414120 ARHGAP5Q13017 1502 aa17.69■□□□□ 0.42
LINC00887-202ENST00000414120 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
LINC00887-202ENST00000414120 OFD1O75665 1012 aa17.68■□□□□ 0.42
LINC00887-202ENST00000414120 GPATCH8Q9UKJ3 1502 aaKnown RBP17.66■□□□□ 0.42
LINC00887-202ENST00000414120 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC00887-202ENST00000414120 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
LINC00887-202ENST00000414120 RALBP1Q15311 655 aa17.66■□□□□ 0.42
LINC00887-202ENST00000414120 DYNC1I1O14576 645 aa17.65■□□□□ 0.42
LINC00887-202ENST00000414120 FRAT2O75474 233 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-202ENST00000414120 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00887-202ENST00000414120 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
LINC00887-202ENST00000414120 PATL2C9JE40 543 aaKnown RBP17.65■□□□□ 0.42
LINC00887-202ENST00000414120 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00887-202ENST00000414120 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-202ENST00000414120 FANCAO15360 1455 aa17.64■□□□□ 0.41
LINC00887-202ENST00000414120 PLCH2O75038 1416 aa17.64■□□□□ 0.41
LINC00887-202ENST00000414120 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
LINC00887-202ENST00000414120 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
LINC00887-202ENST00000414120 TSPYL1Q9H0U9 437 aa17.62■□□□□ 0.41
LINC00887-202ENST00000414120 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 MRE11P49959 708 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 TMEM132AQ24JP5 1023 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 NBPF20Q3BBV1 942 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 PUS7Q96PZ0 661 aaKnown RBP17.61■□□□□ 0.41
LINC00887-202ENST00000414120 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
LINC00887-202ENST00000414120 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
LINC00887-202ENST00000414120 SOX12O15370 315 aa17.59■□□□□ 0.41
LINC00887-202ENST00000414120 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
LINC00887-202ENST00000414120 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
LINC00887-202ENST00000414120 GLI2P10070 1586 aa17.58■□□□□ 0.4
LINC00887-202ENST00000414120 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.4
LINC00887-202ENST00000414120 TMED8Q6PL24 325 aaPredicted RBP17.57■□□□□ 0.4
LINC00887-202ENST00000414120 ZNF592Q92610 1267 aa17.57■□□□□ 0.4
LINC00887-202ENST00000414120 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
LINC00887-202ENST00000414120 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
LINC00887-202ENST00000414120 CDC42BPAQ5VT25 1732 aa17.56■□□□□ 0.4
LINC00887-202ENST00000414120 FAM13BQ9NYF5 915 aa17.56■□□□□ 0.4
LINC00887-202ENST00000414120 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
LINC00887-202ENST00000414120 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
LINC00887-202ENST00000414120 IRX5P78411 483 aaPredicted RBP17.55■□□□□ 0.4
LINC00887-202ENST00000414120 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
LINC00887-202ENST00000414120 FAM43BQ6ZT52 329 aaPredicted RBP17.54■□□□□ 0.4
LINC00887-202ENST00000414120 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
LINC00887-202ENST00000414120 POGKQ9P215 609 aa17.54■□□□□ 0.4
LINC00887-202ENST00000414120 SMG6Q86US8 1419 aaKnown RBP17.53■□□□□ 0.4
LINC00887-202ENST00000414120 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
LINC00887-202ENST00000414120 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
LINC00887-202ENST00000414120 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
LINC00887-202ENST00000414120 TSPY4P0CV99 314 aa17.53■□□□□ 0.4
LINC00887-202ENST00000414120 TSPY10P0CW01 314 aa17.53■□□□□ 0.4
LINC00887-202ENST00000414120 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
LINC00887-202ENST00000414120 MIA2Q96PC5 1412 aa17.52■□□□□ 0.39
LINC00887-202ENST00000414120 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
LINC00887-202ENST00000414120 SYCP2Q9BX26 1530 aa17.52■□□□□ 0.39
LINC00887-202ENST00000414120 EGFL6Q8IUX8 553 aa17.51■□□□□ 0.39
LINC00887-202ENST00000414120 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
LINC00887-202ENST00000414120 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
LINC00887-202ENST00000414120 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
LINC00887-202ENST00000414120 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
LINC00887-202ENST00000414120 IGSF3O75054 1194 aa17.49■□□□□ 0.39
LINC00887-202ENST00000414120 PSMD1Q99460 953 aa17.49■□□□□ 0.39
LINC00887-202ENST00000414120 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
LINC00887-202ENST00000414120 SPAG9O60271 1321 aaKnown RBP17.48■□□□□ 0.39
LINC00887-202ENST00000414120 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
LINC00887-202ENST00000414120 NEO1Q92859 1461 aa17.48■□□□□ 0.39
LINC00887-202ENST00000414120 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
LINC00887-202ENST00000414120 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
LINC00887-202ENST00000414120 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
LINC00887-202ENST00000414120 PPRC1Q5VV67 1664 aaKnown RBP17.46■□□□□ 0.39
LINC00887-202ENST00000414120 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
LINC00887-202ENST00000414120 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.38
LINC00887-202ENST00000414120 E9PSI1 815 aa17.45■□□□□ 0.38
LINC00887-202ENST00000414120 ZSCAN30Q86W11 494 aa17.44■□□□□ 0.38
LINC00887-202ENST00000414120 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
LINC00887-202ENST00000414120 PLEKHH2Q8IVE3 1493 aa17.43■□□□□ 0.38
LINC00887-202ENST00000414120 ARAP3Q8WWN8 1544 aa17.43■□□□□ 0.38
LINC00887-202ENST00000414120 ABCC1P33527 1531 aa17.43■□□□□ 0.38
LINC00887-202ENST00000414120 CCDC66A2RUB6 948 aa17.43■□□□□ 0.38
LINC00887-202ENST00000414120 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
LINC00887-202ENST00000414120 KCNA4P22459 653 aa17.42■□□□□ 0.38
LINC00887-202ENST00000414120 TULP2O00295 520 aa17.42■□□□□ 0.38
LINC00887-202ENST00000414120 MBD5Q9P267 1494 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 ABCC5O15440 1437 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 DAPK1P53355 1430 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 POGZQ7Z3K3 1410 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 UQCRHLA0A096LP55 91 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 UQCRHP07919 91 aa17.41■□□□□ 0.38
LINC00887-202ENST00000414120 KDM6BO15054 1643 aa17.4■□□□□ 0.38
LINC00887-202ENST00000414120 CFAP74Q9C0B2 1584 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms