RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
COL6A2-205ENST00000413758 HSPA1LP34931 641 aa25.43■■□□□ 1.66
COL6A2-205ENST00000413758 RIMS2Q9UQ26 1411 aa25.43■■□□□ 1.66
COL6A2-205ENST00000413758 TMEM131LA2VDJ0 1609 aa25.41■■□□□ 1.66
COL6A2-205ENST00000413758 KCNA6P17658 529 aa25.4■■□□□ 1.66
COL6A2-205ENST00000413758 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.39■■□□□ 1.66
COL6A2-205ENST00000413758 NUTM2DQ5VT03 806 aaPredicted RBP25.38■■□□□ 1.65
COL6A2-205ENST00000413758 PROSER2Q86WR7 435 aaPredicted RBP25.38■■□□□ 1.65
COL6A2-205ENST00000413758 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
COL6A2-205ENST00000413758 PLEKHG1Q9ULL1 1385 aa25.36■■□□□ 1.65
COL6A2-205ENST00000413758 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
COL6A2-205ENST00000413758 NAIPQ13075 1403 aa25.35■■□□□ 1.65
COL6A2-205ENST00000413758 ALKQ9UM73 1620 aa25.34■■□□□ 1.65
COL6A2-205ENST00000413758 TMEM94Q12767 1356 aa25.33■■□□□ 1.65
COL6A2-205ENST00000413758 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
COL6A2-205ENST00000413758 XIRP1Q702N8 1843 aaKnown RBP25.3■■□□□ 1.64
COL6A2-205ENST00000413758 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
COL6A2-205ENST00000413758 ZNF326Q5BKZ1 582 aaKnown RBP25.3■■□□□ 1.64
COL6A2-205ENST00000413758 ILDR2Q71H61 639 aa25.27■■□□□ 1.64
COL6A2-205ENST00000413758 TBX22Q9Y458 520 aa25.27■■□□□ 1.64
COL6A2-205ENST00000413758 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
COL6A2-205ENST00000413758 NKTRP30414 1462 aaKnown RBP25.27■■□□□ 1.64
COL6A2-205ENST00000413758 NWD1Q149M9 1564 aa25.26■■□□□ 1.63
COL6A2-205ENST00000413758 C14orf37Q86TY3 774 aa25.22■■□□□ 1.63
COL6A2-205ENST00000413758 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
COL6A2-205ENST00000413758 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
COL6A2-205ENST00000413758 MSH6P52701 1360 aa25.21■■□□□ 1.63
COL6A2-205ENST00000413758 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
COL6A2-205ENST00000413758 DIP2AQ14689 1571 aa25.19■■□□□ 1.62
COL6A2-205ENST00000413758 CLTCL1P53675 1640 aa25.19■■□□□ 1.62
COL6A2-205ENST00000413758 TRPM2O94759 1503 aa25.17■■□□□ 1.62
COL6A2-205ENST00000413758 MED1Q15648 1581 aaPredicted RBP25.17■■□□□ 1.62
COL6A2-205ENST00000413758 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
COL6A2-205ENST00000413758 PIK3R4Q99570 1358 aa25.15■■□□□ 1.62
COL6A2-205ENST00000413758 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.62
COL6A2-205ENST00000413758 KIF1BO60333 1816 aa25.14■■□□□ 1.61
COL6A2-205ENST00000413758 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
COL6A2-205ENST00000413758 SLAIN2Q9P270 581 aa25.11■■□□□ 1.61
COL6A2-205ENST00000413758 ROBO1Q9Y6N7 1651 aa25.1■■□□□ 1.61
COL6A2-205ENST00000413758 FOXD1Q16676 465 aa25.09■■□□□ 1.61
COL6A2-205ENST00000413758 NCOA3Q9Y6Q9 1424 aa25.08■■□□□ 1.61
COL6A2-205ENST00000413758 SETBP1Q9Y6X0 1596 aa25.07■■□□□ 1.6
COL6A2-205ENST00000413758 PTPRUQ92729 1446 aa25.07■■□□□ 1.6
COL6A2-205ENST00000413758 SOCS7O14512 581 aa25.07■■□□□ 1.6
COL6A2-205ENST00000413758 ATF3P18847 181 aa25.07■■□□□ 1.6
COL6A2-205ENST00000413758 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
COL6A2-205ENST00000413758 NRXN3Q9Y4C0 1643 aa25.06■■□□□ 1.6
COL6A2-205ENST00000413758 C19orf44Q9H6X5 657 aa25.05■■□□□ 1.6
COL6A2-205ENST00000413758 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
COL6A2-205ENST00000413758 CADPS2Q86UW7 1296 aa25.03■■□□□ 1.6
COL6A2-205ENST00000413758 METP08581 1390 aa25.03■■□□□ 1.6
COL6A2-205ENST00000413758 MPHOSPH9Q99550 1183 aa25.02■■□□□ 1.6
COL6A2-205ENST00000413758 SIPA1L2Q9P2F8 1722 aaPredicted RBP25■■□□□ 1.59
COL6A2-205ENST00000413758 RPGRIP1LQ68CZ1 1315 aa25■■□□□ 1.59
COL6A2-205ENST00000413758 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
COL6A2-205ENST00000413758 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
COL6A2-205ENST00000413758 PHLPP1O60346 1717 aa24.98■■□□□ 1.59
COL6A2-205ENST00000413758 SETD5Q9C0A6 1442 aa24.96■■□□□ 1.59
COL6A2-205ENST00000413758 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
COL6A2-205ENST00000413758 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
COL6A2-205ENST00000413758 PPLO60437 1756 aa24.92■■□□□ 1.58
COL6A2-205ENST00000413758 JCADQ9P266 1359 aa24.9■■□□□ 1.58
COL6A2-205ENST00000413758 DCCP43146 1447 aa24.89■■□□□ 1.58
COL6A2-205ENST00000413758 BRINP3Q76B58 766 aa24.87■■□□□ 1.57
COL6A2-205ENST00000413758 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
COL6A2-205ENST00000413758 RAB3GAP2Q9H2M9 1393 aa24.86■■□□□ 1.57
COL6A2-205ENST00000413758 ADGRF5Q8IZF2 1346 aa24.85■■□□□ 1.57
COL6A2-205ENST00000413758 COL16A1Q07092 1604 aaPredicted RBP24.84■■□□□ 1.57
COL6A2-205ENST00000413758 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
COL6A2-205ENST00000413758 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
COL6A2-205ENST00000413758 MST1RQ04912 1400 aa24.83■■□□□ 1.57
COL6A2-205ENST00000413758 SPATA31E1Q6ZUB1 1445 aa24.83■■□□□ 1.57
COL6A2-205ENST00000413758 ROBO2Q9HCK4 1378 aa24.82■■□□□ 1.56
COL6A2-205ENST00000413758 PTCH1Q13635 1447 aa24.82■■□□□ 1.56
COL6A2-205ENST00000413758 NALCNQ8IZF0 1738 aa24.82■■□□□ 1.56
COL6A2-205ENST00000413758 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
COL6A2-205ENST00000413758 RGS17Q9UGC6 210 aaPredicted RBP24.81■■□□□ 1.56
COL6A2-205ENST00000413758 MEX3CQ5U5Q3 659 aaKnown RBP24.8■■□□□ 1.56
COL6A2-205ENST00000413758 STK26Q9P289 416 aa24.8■■□□□ 1.56
COL6A2-205ENST00000413758 ASXL1Q8IXJ9 1541 aa24.8■■□□□ 1.56
COL6A2-205ENST00000413758 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
COL6A2-205ENST00000413758 IFT172Q9UG01 1749 aa24.75■■□□□ 1.55
COL6A2-205ENST00000413758 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
COL6A2-205ENST00000413758 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
COL6A2-205ENST00000413758 TMEM132EQ6IEE7 984 aa24.74■■□□□ 1.55
COL6A2-205ENST00000413758 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
COL6A2-205ENST00000413758 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
COL6A2-205ENST00000413758 POTEAQ6S8J7 498 aa24.73■■□□□ 1.55
COL6A2-205ENST00000413758 C1orf167Q5SNV9 1468 aa24.72■■□□□ 1.55
COL6A2-205ENST00000413758 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
COL6A2-205ENST00000413758 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
COL6A2-205ENST00000413758 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
COL6A2-205ENST00000413758 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
COL6A2-205ENST00000413758 NHSL1Q5SYE7 1610 aa24.7■■□□□ 1.54
COL6A2-205ENST00000413758 LRPPRCP42704 1394 aaKnown RBP24.69■■□□□ 1.54
COL6A2-205ENST00000413758 LRP6O75581 1613 aa24.69■■□□□ 1.54
COL6A2-205ENST00000413758 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
COL6A2-205ENST00000413758 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
COL6A2-205ENST00000413758 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
COL6A2-205ENST00000413758 YTHDC2Q9H6S0 1430 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms