RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
HERPUD2-203ENST00000413517 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
HERPUD2-203ENST00000413517 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
HERPUD2-203ENST00000413517 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
HERPUD2-203ENST00000413517 SPHKAPQ2M3C7 1700 aa13□□□□□ -0.33
HERPUD2-203ENST00000413517 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
HERPUD2-203ENST00000413517 IDI1Q13907 227 aa13□□□□□ -0.33
HERPUD2-203ENST00000413517 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
HERPUD2-203ENST00000413517 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
HERPUD2-203ENST00000413517 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
HERPUD2-203ENST00000413517 NUP155O75694 1391 aa12.99□□□□□ -0.33
HERPUD2-203ENST00000413517 LTKP29376 864 aa12.98□□□□□ -0.33
HERPUD2-203ENST00000413517 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
HERPUD2-203ENST00000413517 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
HERPUD2-203ENST00000413517 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
HERPUD2-203ENST00000413517 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
HERPUD2-203ENST00000413517 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
HERPUD2-203ENST00000413517 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
HERPUD2-203ENST00000413517 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
HERPUD2-203ENST00000413517 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
HERPUD2-203ENST00000413517 CPS1P31327 1500 aa12.91□□□□□ -0.34
HERPUD2-203ENST00000413517 TRPM2O94759 1503 aa12.9□□□□□ -0.34
HERPUD2-203ENST00000413517 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
HERPUD2-203ENST00000413517 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
HERPUD2-203ENST00000413517 KIF1BO60333 1816 aa12.9□□□□□ -0.34
HERPUD2-203ENST00000413517 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
HERPUD2-203ENST00000413517 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
HERPUD2-203ENST00000413517 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
HERPUD2-203ENST00000413517 EID1Q9Y6B2 187 aa12.87□□□□□ -0.35
HERPUD2-203ENST00000413517 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
HERPUD2-203ENST00000413517 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
HERPUD2-203ENST00000413517 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
HERPUD2-203ENST00000413517 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
HERPUD2-203ENST00000413517 BCANQ96GW7 911 aa12.85□□□□□ -0.35
HERPUD2-203ENST00000413517 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
HERPUD2-203ENST00000413517 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
HERPUD2-203ENST00000413517 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
HERPUD2-203ENST00000413517 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
HERPUD2-203ENST00000413517 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.35
HERPUD2-203ENST00000413517 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
HERPUD2-203ENST00000413517 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
HERPUD2-203ENST00000413517 PPLO60437 1756 aa12.81□□□□□ -0.36
HERPUD2-203ENST00000413517 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
HERPUD2-203ENST00000413517 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
HERPUD2-203ENST00000413517 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
HERPUD2-203ENST00000413517 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
HERPUD2-203ENST00000413517 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
HERPUD2-203ENST00000413517 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
HERPUD2-203ENST00000413517 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 KCNA6P17658 529 aa12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 XRN1Q8IZH2 1706 aaKnown RBP12.78□□□□□ -0.36
HERPUD2-203ENST00000413517 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
HERPUD2-203ENST00000413517 MPHOSPH9Q99550 1183 aa12.77□□□□□ -0.37
HERPUD2-203ENST00000413517 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
HERPUD2-203ENST00000413517 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
HERPUD2-203ENST00000413517 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
HERPUD2-203ENST00000413517 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
HERPUD2-203ENST00000413517 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
HERPUD2-203ENST00000413517 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
HERPUD2-203ENST00000413517 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
HERPUD2-203ENST00000413517 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
HERPUD2-203ENST00000413517 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
HERPUD2-203ENST00000413517 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
HERPUD2-203ENST00000413517 METP08581 1390 aa12.72□□□□□ -0.37
HERPUD2-203ENST00000413517 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
HERPUD2-203ENST00000413517 TOM1O60784 492 aa12.72□□□□□ -0.37
HERPUD2-203ENST00000413517 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
HERPUD2-203ENST00000413517 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
HERPUD2-203ENST00000413517 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.37
HERPUD2-203ENST00000413517 HSPA1LP34931 641 aa12.7□□□□□ -0.38
HERPUD2-203ENST00000413517 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
HERPUD2-203ENST00000413517 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
HERPUD2-203ENST00000413517 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
HERPUD2-203ENST00000413517 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
HERPUD2-203ENST00000413517 AMOTL2Q9Y2J4 779 aa12.67□□□□□ -0.38
HERPUD2-203ENST00000413517 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
HERPUD2-203ENST00000413517 RPGRIP1LQ68CZ1 1315 aa12.66□□□□□ -0.38
HERPUD2-203ENST00000413517 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
HERPUD2-203ENST00000413517 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
HERPUD2-203ENST00000413517 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
HERPUD2-203ENST00000413517 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
HERPUD2-203ENST00000413517 MSH6P52701 1360 aa12.65□□□□□ -0.38
HERPUD2-203ENST00000413517 NCOA3Q9Y6Q9 1424 aa12.64□□□□□ -0.39
HERPUD2-203ENST00000413517 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
HERPUD2-203ENST00000413517 HRCP23327 699 aa12.64□□□□□ -0.39
HERPUD2-203ENST00000413517 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
HERPUD2-203ENST00000413517 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
HERPUD2-203ENST00000413517 PRAG1Q86YV5 1406 aa12.63□□□□□ -0.39
HERPUD2-203ENST00000413517 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
HERPUD2-203ENST00000413517 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
HERPUD2-203ENST00000413517 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
HERPUD2-203ENST00000413517 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
HERPUD2-203ENST00000413517 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
HERPUD2-203ENST00000413517 MYOM2P54296 1465 aa12.61□□□□□ -0.39
HERPUD2-203ENST00000413517 ROBO2Q9HCK4 1378 aa12.61□□□□□ -0.39
HERPUD2-203ENST00000413517 ADGRL3Q9HAR2 1447 aa12.61□□□□□ -0.39
HERPUD2-203ENST00000413517 LAMC1P11047 1609 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms