RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 TXNDC2Q86VQ3 553 aa20.54■□□□□ 0.88
CPNE1-206ENST00000412056 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
CPNE1-206ENST00000412056 PPLO60437 1756 aa20.53■□□□□ 0.88
CPNE1-206ENST00000412056 NEXMIFQ5QGS0 1516 aa20.53■□□□□ 0.88
CPNE1-206ENST00000412056 EID1Q9Y6B2 187 aa20.52■□□□□ 0.88
CPNE1-206ENST00000412056 IFT172Q9UG01 1749 aa20.5■□□□□ 0.87
CPNE1-206ENST00000412056 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
CPNE1-206ENST00000412056 DHX57Q6P158 1386 aaKnown RBP20.49■□□□□ 0.87
CPNE1-206ENST00000412056 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
CPNE1-206ENST00000412056 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
CPNE1-206ENST00000412056 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-206ENST00000412056 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
CPNE1-206ENST00000412056 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
CPNE1-206ENST00000412056 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
CPNE1-206ENST00000412056 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
CPNE1-206ENST00000412056 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-206ENST00000412056 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
CPNE1-206ENST00000412056 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
CPNE1-206ENST00000412056 ZNF335Q9H4Z2 1342 aaPredicted RBP20.41■□□□□ 0.86
CPNE1-206ENST00000412056 LTBP4Q8N2S1 1624 aa20.41■□□□□ 0.86
CPNE1-206ENST00000412056 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
CPNE1-206ENST00000412056 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
CPNE1-206ENST00000412056 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
CPNE1-206ENST00000412056 BCANQ96GW7 911 aa20.39■□□□□ 0.85
CPNE1-206ENST00000412056 SLC26A8Q96RN1 970 aa20.39■□□□□ 0.85
CPNE1-206ENST00000412056 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
CPNE1-206ENST00000412056 SETD1AO15047 1707 aaKnown RBP20.38■□□□□ 0.85
CPNE1-206ENST00000412056 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
CPNE1-206ENST00000412056 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-206ENST00000412056 MYOM2P54296 1465 aa20.34■□□□□ 0.85
CPNE1-206ENST00000412056 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
CPNE1-206ENST00000412056 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
CPNE1-206ENST00000412056 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
CPNE1-206ENST00000412056 ALKQ9UM73 1620 aa20.32■□□□□ 0.84
CPNE1-206ENST00000412056 CPS1P31327 1500 aa20.32■□□□□ 0.84
CPNE1-206ENST00000412056 TBX22Q9Y458 520 aa20.31■□□□□ 0.84
CPNE1-206ENST00000412056 NRXN1Q9ULB1 1477 aa20.3■□□□□ 0.84
CPNE1-206ENST00000412056 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
CPNE1-206ENST00000412056 PIK3C2GO75747 1445 aa20.28■□□□□ 0.84
CPNE1-206ENST00000412056 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
CPNE1-206ENST00000412056 NEUROD1Q13562 356 aa20.27■□□□□ 0.84
CPNE1-206ENST00000412056 LAMC1P11047 1609 aa20.27■□□□□ 0.83
CPNE1-206ENST00000412056 PTPRUQ92729 1446 aa20.27■□□□□ 0.83
CPNE1-206ENST00000412056 METP08581 1390 aa20.26■□□□□ 0.83
CPNE1-206ENST00000412056 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
CPNE1-206ENST00000412056 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
CPNE1-206ENST00000412056 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
CPNE1-206ENST00000412056 KCNA6P17658 529 aa20.25■□□□□ 0.83
CPNE1-206ENST00000412056 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
CPNE1-206ENST00000412056 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
CPNE1-206ENST00000412056 LRRC7Q96NW7 1537 aa20.25■□□□□ 0.83
CPNE1-206ENST00000412056 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
CPNE1-206ENST00000412056 IQSEC2Q5JU85 1478 aa20.21■□□□□ 0.83
CPNE1-206ENST00000412056 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
CPNE1-206ENST00000412056 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
CPNE1-206ENST00000412056 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
CPNE1-206ENST00000412056 AMOTL2Q9Y2J4 779 aa20.18■□□□□ 0.82
CPNE1-206ENST00000412056 KIAA1210Q9ULL0 1709 aa20.17■□□□□ 0.82
CPNE1-206ENST00000412056 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
CPNE1-206ENST00000412056 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
CPNE1-206ENST00000412056 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-206ENST00000412056 TMEM94Q12767 1356 aa20.16■□□□□ 0.82
CPNE1-206ENST00000412056 PRAG1Q86YV5 1406 aa20.16■□□□□ 0.82
CPNE1-206ENST00000412056 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
CPNE1-206ENST00000412056 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
CPNE1-206ENST00000412056 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
CPNE1-206ENST00000412056 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
CPNE1-206ENST00000412056 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
CPNE1-206ENST00000412056 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-206ENST00000412056 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
CPNE1-206ENST00000412056 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
CPNE1-206ENST00000412056 TRPM1Q7Z4N2 1603 aa20.12■□□□□ 0.81
CPNE1-206ENST00000412056 YTHDC2Q9H6S0 1430 aaKnown RBP20.11■□□□□ 0.81
CPNE1-206ENST00000412056 LRPPRCP42704 1394 aaKnown RBP20.11■□□□□ 0.81
CPNE1-206ENST00000412056 TECPR2O15040 1411 aa20.1■□□□□ 0.81
CPNE1-206ENST00000412056 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-206ENST00000412056 ROBO2Q9HCK4 1378 aa20.09■□□□□ 0.81
CPNE1-206ENST00000412056 STK26Q9P289 416 aa20.09■□□□□ 0.81
CPNE1-206ENST00000412056 ABCC11Q96J66 1382 aa20.08■□□□□ 0.8
CPNE1-206ENST00000412056 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
CPNE1-206ENST00000412056 NCOA3Q9Y6Q9 1424 aa20.07■□□□□ 0.8
CPNE1-206ENST00000412056 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
CPNE1-206ENST00000412056 MSH6P52701 1360 aa20.05■□□□□ 0.8
CPNE1-206ENST00000412056 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
CPNE1-206ENST00000412056 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
CPNE1-206ENST00000412056 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
CPNE1-206ENST00000412056 FBXO41Q8TF61 875 aa20.04■□□□□ 0.8
CPNE1-206ENST00000412056 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
CPNE1-206ENST00000412056 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
CPNE1-206ENST00000412056 PLEKHH1Q9ULM0 1364 aa20.03■□□□□ 0.8
CPNE1-206ENST00000412056 WAPLQ7Z5K2 1190 aa20.01■□□□□ 0.79
CPNE1-206ENST00000412056 FAM135BQ49AJ0 1406 aa20.01■□□□□ 0.79
CPNE1-206ENST00000412056 TRAK1Q9UPV9 953 aa20■□□□□ 0.79
CPNE1-206ENST00000412056 TOM1O60784 492 aa19.99■□□□□ 0.79
CPNE1-206ENST00000412056 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
CPNE1-206ENST00000412056 C19orf44Q9H6X5 657 aa19.98■□□□□ 0.79
CPNE1-206ENST00000412056 DCCP43146 1447 aa19.98■□□□□ 0.79
CPNE1-206ENST00000412056 CDC42BPGQ6DT37 1551 aa19.97■□□□□ 0.79
CPNE1-206ENST00000412056 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
CPNE1-206ENST00000412056 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms