RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CCDC9Q9Y3X0 531 aaKnown RBP5.54□□□□□ -1.52
PTPN13-202ENST00000411767 DHX8Q14562 1220 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 CEP112Q8N8E3 955 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 RBM19Q9Y4C8 960 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 RBM28Q9NW13 759 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 CCDC172P0C7W6 258 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 CT47B1P0C2W7 299 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 NAP1L1P55209 391 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 ATP6V1DQ9Y5K8 247 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 SF3A1Q15459 793 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 HSP90AB4PQ58FF6 505 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 FAM107BQ9H098 131 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 KIF5CO60282 957 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 GIGYF2Q6Y7W6 1299 aaKnown RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 FEZ2Q9UHY8 353 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 BECN2A8MW95 431 aa5.53□□□□□ -1.52
PTPN13-202ENST00000411767 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-202ENST00000411767 EPS15P42566 896 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 SMARCE1Q969G3 411 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 NCAPGQ9BPX3 1015 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 PRPF31Q8WWY3 499 aaKnown RBP5.52□□□□□ -1.53
PTPN13-202ENST00000411767 ZFYVE1Q9HBF4 777 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 FERP16591 822 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 PPM1FP49593 454 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-202ENST00000411767 POTEB3A0JP26 581 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-202ENST00000411767 MYZAPP0CAP1 466 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 C6orf163Q5TEZ5 329 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 POTEBQ6S5H4 581 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 MICALCLQ6ZW33 695 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 CHMP5Q9NZZ3 219 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 PABPN1LA6NDY0 278 aaKnown RBP5.52□□□□□ -1.53
PTPN13-202ENST00000411767 NEBLO76041 1014 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 TXLNAP40222 546 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 AMOTL1Q8IY63 956 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 LUC7LQ9NQ29 371 aaKnown RBP5.52□□□□□ -1.53
PTPN13-202ENST00000411767 MKL2Q9ULH7 1088 aa5.52□□□□□ -1.53
PTPN13-202ENST00000411767 TSPY4P0CV99 314 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 TSPY10P0CW01 314 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 MIPOL1Q8TD10 442 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 RBM33Q96EV2 1170 aaKnown RBP5.51□□□□□ -1.53
PTPN13-202ENST00000411767 PLEKHD1A6NEE1 506 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 ZBTB17Q13105 803 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 SYCP1Q15431 976 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 VIMP08670 466 aaKnown RBP5.51□□□□□ -1.53
PTPN13-202ENST00000411767 TIMELESSQ9UNS1 1208 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 ERC2O15083 957 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 GMNNO75496 209 aa5.51□□□□□ -1.53
PTPN13-202ENST00000411767 CC2D1BQ5T0F9 858 aaKnown RBP5.51□□□□□ -1.53
PTPN13-202ENST00000411767 FAM9BQ8IZU0 186 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 KIAA1328Q86T90 577 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 MRS2Q9HD23 443 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 ARHGAP25P42331 645 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 MCM6Q14566 821 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 PDCD2Q16342 344 aaPredicted RBP5.5□□□□□ -1.53
PTPN13-202ENST00000411767 PPFIA2O75334 1257 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 TRIM34Q9BYJ4 488 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 USH1CQ9Y6N9 552 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 NOP2P46087 812 aaKnown RBP5.5□□□□□ -1.53
PTPN13-202ENST00000411767 CCDC50Q8IVM0 306 aa5.5□□□□□ -1.53
PTPN13-202ENST00000411767 MKRN1Q9UHC7 482 aaKnown RBP5.5□□□□□ -1.53
PTPN13-202ENST00000411767 CAVIN1Q6NZI2 390 aaKnown RBP5.5□□□□□ -1.53
PTPN13-202ENST00000411767 SKOR2Q2VWA4 1001 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CENPHQ9H3R5 247 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CALCOCO2Q13137 446 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 WDR63Q8IWG1 891 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 IQCGQ9H095 443 aaKnown RBP5.49□□□□□ -1.53
PTPN13-202ENST00000411767 DEKP35659 375 aaKnown RBP5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CEP135Q66GS9 1140 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CCDC110Q8TBZ0 833 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 SMC2O95347 1197 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 DCAF8L1A6NGE4 600 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CHGAP10645 457 aaKnown RBP5.49□□□□□ -1.53
PTPN13-202ENST00000411767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.49□□□□□ -1.53
PTPN13-202ENST00000411767 PKNOX2Q96KN3 472 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 NUDCQ9Y266 331 aa5.49□□□□□ -1.53
PTPN13-202ENST00000411767 CNGA1P29973 690 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 DYNC1I1O14576 645 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 EIF3DO15371 548 aaKnown RBP eCLIP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 MAP2K1Q02750 393 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 CDCA8Q53HL2 280 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 GBP6Q6ZN66 633 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 DZIP1LQ8IYY4 767 aaKnown RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 PPARGC1BQ86YN6 1023 aaKnown RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 ZNF592Q92610 1267 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 FAM13BQ9NYF5 915 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 PPP1R12BO60237 982 aaPredicted RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 DIAPH1O60610 1272 aaKnown RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 FLIIQ13045 1269 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 STMN2Q93045 179 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 NUCKS1Q9H1E3 243 aaKnown RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 ZNF710Q8N1W2 664 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 DNAAF4Q8WXU2 420 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 TONSLQ96HA7 1378 aa5.48□□□□□ -1.53
PTPN13-202ENST00000411767 LRRFIP1Q32MZ4 808 aaKnown RBP5.48□□□□□ -1.53
PTPN13-202ENST00000411767 RPUSD2Q8IZ73 545 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms