RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 ZNF335Q9H4Z2 1342 aaPredicted RBP28.44■■■□□ 2.14
KLF4-202ENST00000411706 ZFYVE9O95405 1425 aa28.44■■■□□ 2.14
KLF4-202ENST00000411706 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
KLF4-202ENST00000411706 PPP1R15AO75807 674 aaPredicted RBP28.41■■■□□ 2.14
KLF4-202ENST00000411706 FOXD1Q16676 465 aa28.39■■■□□ 2.14
KLF4-202ENST00000411706 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
KLF4-202ENST00000411706 IQSEC2Q5JU85 1478 aa28.38■■■□□ 2.13
KLF4-202ENST00000411706 CPS1P31327 1500 aa28.38■■■□□ 2.13
KLF4-202ENST00000411706 PLEKHG1Q9ULL1 1385 aa28.37■■■□□ 2.13
KLF4-202ENST00000411706 BCANQ96GW7 911 aa28.36■■■□□ 2.13
KLF4-202ENST00000411706 CCDC144AA2RUR9 1427 aa28.35■■■□□ 2.13
KLF4-202ENST00000411706 FBXO41Q8TF61 875 aa28.34■■■□□ 2.13
KLF4-202ENST00000411706 SLC26A8Q96RN1 970 aa28.29■■■□□ 2.12
KLF4-202ENST00000411706 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
KLF4-202ENST00000411706 RPGRIP1LQ68CZ1 1315 aa28.28■■■□□ 2.12
KLF4-202ENST00000411706 NUTM2DQ5VT03 806 aaPredicted RBP28.28■■■□□ 2.12
KLF4-202ENST00000411706 NEXMIFQ5QGS0 1516 aa28.27■■■□□ 2.12
KLF4-202ENST00000411706 DIP2AQ14689 1571 aa28.26■■■□□ 2.11
KLF4-202ENST00000411706 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
KLF4-202ENST00000411706 ILDR1Q86SU0 546 aaPredicted RBP28.26■■■□□ 2.11
KLF4-202ENST00000411706 TBX22Q9Y458 520 aa28.26■■■□□ 2.11
KLF4-202ENST00000411706 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
KLF4-202ENST00000411706 KCNA6P17658 529 aa28.23■■■□□ 2.11
KLF4-202ENST00000411706 PPLO60437 1756 aa28.22■■■□□ 2.11
KLF4-202ENST00000411706 CHD2O14647 1828 aaKnown RBP28.22■■■□□ 2.11
KLF4-202ENST00000411706 SETBP1Q9Y6X0 1596 aa28.2■■■□□ 2.11
KLF4-202ENST00000411706 ADAMTS13Q76LX8 1427 aa28.2■■■□□ 2.11
KLF4-202ENST00000411706 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
KLF4-202ENST00000411706 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
KLF4-202ENST00000411706 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
KLF4-202ENST00000411706 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
KLF4-202ENST00000411706 LRRC7Q96NW7 1537 aa28.18■■■□□ 2.1
KLF4-202ENST00000411706 NWD1Q149M9 1564 aa28.17■■■□□ 2.1
KLF4-202ENST00000411706 NRXN3Q9Y4C0 1643 aa28.16■■■□□ 2.1
KLF4-202ENST00000411706 RGL3Q3MIN7 710 aa28.15■■■□□ 2.1
KLF4-202ENST00000411706 IFT172Q9UG01 1749 aa28.14■■■□□ 2.1
KLF4-202ENST00000411706 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.09
KLF4-202ENST00000411706 XIRP1Q702N8 1843 aaKnown RBP28.11■■■□□ 2.09
KLF4-202ENST00000411706 UBAP1LF5GYI3 381 aa28.1■■■□□ 2.09
KLF4-202ENST00000411706 TOM1O60784 492 aa28.09■■■□□ 2.09
KLF4-202ENST00000411706 PROSER2Q86WR7 435 aaPredicted RBP28.09■■■□□ 2.09
KLF4-202ENST00000411706 TMEM94Q12767 1356 aa28.04■■■□□ 2.08
KLF4-202ENST00000411706 AMOTL2Q9Y2J4 779 aa28.04■■■□□ 2.08
KLF4-202ENST00000411706 ALKQ9UM73 1620 aa28.03■■■□□ 2.08
KLF4-202ENST00000411706 SETD1AO15047 1707 aaKnown RBP28.02■■■□□ 2.08
KLF4-202ENST00000411706 ADGRF5Q8IZF2 1346 aa28.01■■■□□ 2.07
KLF4-202ENST00000411706 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.07
KLF4-202ENST00000411706 METP08581 1390 aa28■■■□□ 2.07
KLF4-202ENST00000411706 XRN1Q8IZH2 1706 aaKnown RBP28■■■□□ 2.07
KLF4-202ENST00000411706 PTPRUQ92729 1446 aa28■■■□□ 2.07
KLF4-202ENST00000411706 STAC3Q96MF2 364 aa27.99■■■□□ 2.07
KLF4-202ENST00000411706 MYOM2P54296 1465 aa27.98■■■□□ 2.07
KLF4-202ENST00000411706 PIK3C2GO75747 1445 aa27.95■■■□□ 2.07
KLF4-202ENST00000411706 MSH6P52701 1360 aa27.95■■■□□ 2.06
KLF4-202ENST00000411706 RBM33Q96EV2 1170 aaKnown RBP27.93■■■□□ 2.06
KLF4-202ENST00000411706 NRXN1Q9ULB1 1477 aa27.93■■■□□ 2.06
KLF4-202ENST00000411706 LAMC1P11047 1609 aa27.92■■■□□ 2.06
KLF4-202ENST00000411706 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
KLF4-202ENST00000411706 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
KLF4-202ENST00000411706 PIP4K2BP78356 416 aa27.9■■■□□ 2.06
KLF4-202ENST00000411706 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
KLF4-202ENST00000411706 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.06
KLF4-202ENST00000411706 C14orf93Q9H972 538 aaKnown RBP27.88■■■□□ 2.05
KLF4-202ENST00000411706 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
KLF4-202ENST00000411706 C19orf44Q9H6X5 657 aa27.87■■■□□ 2.05
KLF4-202ENST00000411706 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
KLF4-202ENST00000411706 KDM2AQ9Y2K7 1162 aa27.86■■■□□ 2.05
KLF4-202ENST00000411706 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.85■■■□□ 2.05
KLF4-202ENST00000411706 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
KLF4-202ENST00000411706 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
KLF4-202ENST00000411706 ATF3P18847 181 aa27.81■■■□□ 2.04
KLF4-202ENST00000411706 CFAP70Q5T0N1 1121 aa27.81■■■□□ 2.04
KLF4-202ENST00000411706 LRPPRCP42704 1394 aaKnown RBP27.81■■■□□ 2.04
KLF4-202ENST00000411706 DCCP43146 1447 aa27.8■■■□□ 2.04
KLF4-202ENST00000411706 ABCC11Q96J66 1382 aa27.79■■■□□ 2.04
KLF4-202ENST00000411706 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
KLF4-202ENST00000411706 ASXL1Q8IXJ9 1541 aa27.78■■■□□ 2.04
KLF4-202ENST00000411706 TECPR2O15040 1411 aa27.78■■■□□ 2.04
KLF4-202ENST00000411706 FAM135BQ49AJ0 1406 aa27.78■■■□□ 2.04
KLF4-202ENST00000411706 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
KLF4-202ENST00000411706 SLAIN2Q9P270 581 aa27.78■■■□□ 2.04
KLF4-202ENST00000411706 YTHDC2Q9H6S0 1430 aaKnown RBP27.77■■■□□ 2.04
KLF4-202ENST00000411706 ADGRL3Q9HAR2 1447 aa27.77■■■□□ 2.04
KLF4-202ENST00000411706 SIN3AQ96ST3 1273 aa27.77■■■□□ 2.04
KLF4-202ENST00000411706 STK26Q9P289 416 aa27.76■■■□□ 2.03
KLF4-202ENST00000411706 NALCNQ8IZF0 1738 aa27.75■■■□□ 2.03
KLF4-202ENST00000411706 PCGF6Q9BYE7 350 aa27.75■■■□□ 2.03
KLF4-202ENST00000411706 NEUROD1Q13562 356 aa27.74■■■□□ 2.03
KLF4-202ENST00000411706 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
KLF4-202ENST00000411706 ROBO1Q9Y6N7 1651 aa27.73■■■□□ 2.03
KLF4-202ENST00000411706 KIAA1210Q9ULL0 1709 aa27.72■■■□□ 2.03
KLF4-202ENST00000411706 HSPA1LP34931 641 aa27.71■■■□□ 2.03
KLF4-202ENST00000411706 L3MBTL2Q969R5 705 aa27.69■■■□□ 2.02
KLF4-202ENST00000411706 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
KLF4-202ENST00000411706 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
KLF4-202ENST00000411706 WAPLQ7Z5K2 1190 aa27.65■■■□□ 2.02
KLF4-202ENST00000411706 MST1RQ04912 1400 aa27.63■■■□□ 2.01
KLF4-202ENST00000411706 CDC42BPGQ6DT37 1551 aa27.61■■■□□ 2.01
KLF4-202ENST00000411706 POGKQ9P215 609 aa27.6■■■□□ 2.01
KLF4-202ENST00000411706 PLEKHH1Q9ULM0 1364 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms