RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
LIMS2-209ENST00000410038 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
LIMS2-209ENST00000410038 PPLO60437 1756 aa20.86■□□□□ 0.93
LIMS2-209ENST00000410038 POLR1AO95602 1720 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-209ENST00000410038 IFT172Q9UG01 1749 aa20.86■□□□□ 0.93
LIMS2-209ENST00000410038 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
LIMS2-209ENST00000410038 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
LIMS2-209ENST00000410038 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
LIMS2-209ENST00000410038 IQSEC2Q5JU85 1478 aa20.85■□□□□ 0.93
LIMS2-209ENST00000410038 RPGRIP1LQ68CZ1 1315 aa20.82■□□□□ 0.92
LIMS2-209ENST00000410038 LTKP29376 864 aa20.82■□□□□ 0.92
LIMS2-209ENST00000410038 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
LIMS2-209ENST00000410038 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
LIMS2-209ENST00000410038 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
LIMS2-209ENST00000410038 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
LIMS2-209ENST00000410038 EID1Q9Y6B2 187 aa20.8■□□□□ 0.92
LIMS2-209ENST00000410038 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
LIMS2-209ENST00000410038 NCKAP5LQ9HCH0 1330 aa20.79■□□□□ 0.92
LIMS2-209ENST00000410038 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
LIMS2-209ENST00000410038 HDGFP51858 240 aaKnown RBP20.79■□□□□ 0.92
LIMS2-209ENST00000410038 MED14O60244 1454 aa20.77■□□□□ 0.91
LIMS2-209ENST00000410038 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.91
LIMS2-209ENST00000410038 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.91
LIMS2-209ENST00000410038 DCAF11Q8TEB1 546 aa20.76■□□□□ 0.91
LIMS2-209ENST00000410038 VGFO15240 615 aaPredicted RBP20.75■□□□□ 0.91
LIMS2-209ENST00000410038 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
LIMS2-209ENST00000410038 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
LIMS2-209ENST00000410038 MYOM2P54296 1465 aa20.74■□□□□ 0.91
LIMS2-209ENST00000410038 PLEKHG1Q9ULL1 1385 aa20.74■□□□□ 0.91
LIMS2-209ENST00000410038 NPHP4O75161 1426 aaPredicted RBP20.73■□□□□ 0.91
LIMS2-209ENST00000410038 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
LIMS2-209ENST00000410038 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
LIMS2-209ENST00000410038 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-209ENST00000410038 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
LIMS2-209ENST00000410038 STAC3Q96MF2 364 aa20.71■□□□□ 0.91
LIMS2-209ENST00000410038 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
LIMS2-209ENST00000410038 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
LIMS2-209ENST00000410038 BCANQ96GW7 911 aa20.68■□□□□ 0.9
LIMS2-209ENST00000410038 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
LIMS2-209ENST00000410038 PIK3C2GO75747 1445 aa20.68■□□□□ 0.9
LIMS2-209ENST00000410038 ADAMTS13Q76LX8 1427 aa20.67■□□□□ 0.9
LIMS2-209ENST00000410038 SETD1AO15047 1707 aaKnown RBP20.66■□□□□ 0.9
LIMS2-209ENST00000410038 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
LIMS2-209ENST00000410038 ALKQ9UM73 1620 aa20.65■□□□□ 0.9
LIMS2-209ENST00000410038 PRAG1Q86YV5 1406 aa20.64■□□□□ 0.9
LIMS2-209ENST00000410038 DIP2AQ14689 1571 aa20.64■□□□□ 0.9
LIMS2-209ENST00000410038 LAMC1P11047 1609 aa20.63■□□□□ 0.89
LIMS2-209ENST00000410038 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-209ENST00000410038 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
LIMS2-209ENST00000410038 DISP3Q9P2K9 1392 aa20.6■□□□□ 0.89
LIMS2-209ENST00000410038 KIAA1210Q9ULL0 1709 aa20.6■□□□□ 0.89
LIMS2-209ENST00000410038 CFAP70Q5T0N1 1121 aa20.6■□□□□ 0.89
LIMS2-209ENST00000410038 C14orf93Q9H972 538 aaKnown RBP20.6■□□□□ 0.89
LIMS2-209ENST00000410038 NBPF8Q3BBV2 869 aa20.59■□□□□ 0.89
LIMS2-209ENST00000410038 TRPM1Q7Z4N2 1603 aa20.59■□□□□ 0.89
LIMS2-209ENST00000410038 CHD2O14647 1828 aaKnown RBP20.59■□□□□ 0.89
LIMS2-209ENST00000410038 METP08581 1390 aa20.58■□□□□ 0.88
LIMS2-209ENST00000410038 CPS1P31327 1500 aa20.57■□□□□ 0.88
LIMS2-209ENST00000410038 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
LIMS2-209ENST00000410038 STRCP1A6NGW2 1772 aa20.55■□□□□ 0.88
LIMS2-209ENST00000410038 UBAP1LF5GYI3 381 aa20.55■□□□□ 0.88
LIMS2-209ENST00000410038 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
LIMS2-209ENST00000410038 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
LIMS2-209ENST00000410038 TMEM132EQ6IEE7 984 aa20.53■□□□□ 0.88
LIMS2-209ENST00000410038 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
LIMS2-209ENST00000410038 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
LIMS2-209ENST00000410038 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
LIMS2-209ENST00000410038 XRN1Q8IZH2 1706 aaKnown RBP20.51■□□□□ 0.87
LIMS2-209ENST00000410038 RALGAPBQ86X10 1494 aa20.5■□□□□ 0.87
LIMS2-209ENST00000410038 KCNA6P17658 529 aa20.5■□□□□ 0.87
LIMS2-209ENST00000410038 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
LIMS2-209ENST00000410038 YTHDC2Q9H6S0 1430 aaKnown RBP20.49■□□□□ 0.87
LIMS2-209ENST00000410038 KNDC1Q76NI1 1749 aa20.48■□□□□ 0.87
LIMS2-209ENST00000410038 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
LIMS2-209ENST00000410038 LRPPRCP42704 1394 aaKnown RBP20.47■□□□□ 0.87
LIMS2-209ENST00000410038 TOM1O60784 492 aa20.46■□□□□ 0.87
LIMS2-209ENST00000410038 STK26Q9P289 416 aa20.46■□□□□ 0.87
LIMS2-209ENST00000410038 GPRASP1Q5JY77 1395 aa20.46■□□□□ 0.87
LIMS2-209ENST00000410038 ABCC11Q96J66 1382 aa20.45■□□□□ 0.86
LIMS2-209ENST00000410038 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
LIMS2-209ENST00000410038 TECPR2O15040 1411 aa20.44■□□□□ 0.86
LIMS2-209ENST00000410038 SOCS7O14512 581 aa20.43■□□□□ 0.86
LIMS2-209ENST00000410038 ARHGEF28Q8N1W1 1705 aaKnown RBP20.42■□□□□ 0.86
LIMS2-209ENST00000410038 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
LIMS2-209ENST00000410038 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
LIMS2-209ENST00000410038 TRAK1Q9UPV9 953 aa20.42■□□□□ 0.86
LIMS2-209ENST00000410038 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
LIMS2-209ENST00000410038 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
LIMS2-209ENST00000410038 ILDR2Q71H61 639 aa20.41■□□□□ 0.86
LIMS2-209ENST00000410038 DLC1Q96QB1 1528 aa20.4■□□□□ 0.86
LIMS2-209ENST00000410038 ZEB1P37275 1124 aaPredicted RBP20.39■□□□□ 0.86
LIMS2-209ENST00000410038 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.85
LIMS2-209ENST00000410038 PROSER2Q86WR7 435 aaPredicted RBP20.38■□□□□ 0.85
LIMS2-209ENST00000410038 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
LIMS2-209ENST00000410038 SIRT1Q96EB6 747 aa20.37■□□□□ 0.85
LIMS2-209ENST00000410038 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
LIMS2-209ENST00000410038 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
LIMS2-209ENST00000410038 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
LIMS2-209ENST00000410038 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
LIMS2-209ENST00000410038 PLEKHH1Q9ULM0 1364 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms