RNA–Protein interactions for RNA: ENST00000409767.5

PBRM1-207, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-207ENST00000409767 FTSJ3Q8IY81 847 aaKnown RBP8.2□□□□□ -1.1
PBRM1-207ENST00000409767 DAPK1P53355 1430 aa8.2□□□□□ -1.1
PBRM1-207ENST00000409767 ADAMTS2O95450 1211 aa8.2□□□□□ -1.1
PBRM1-207ENST00000409767 L3MBTL2Q969R5 705 aa8.2□□□□□ -1.1
PBRM1-207ENST00000409767 KDM4FA0A1W2PPD8 638 aa8.2□□□□□ -1.1
PBRM1-207ENST00000409767 TNNT2P45379 298 aaPredicted RBP8.2□□□□□ -1.1
PBRM1-207ENST00000409767 SYCP2Q9BX26 1530 aa8.2□□□□□ -1.1
PBRM1-207ENST00000409767 RRBP1Q9P2E9 1410 aaKnown RBP8.19□□□□□ -1.1
PBRM1-207ENST00000409767 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
PBRM1-207ENST00000409767 MIER1Q8N108 512 aa8.19□□□□□ -1.1
PBRM1-207ENST00000409767 CCER2I3L3R5 266 aa8.19□□□□□ -1.1
PBRM1-207ENST00000409767 KCNA6P17658 529 aa8.19□□□□□ -1.1
PBRM1-207ENST00000409767 EVC2Q86UK5 1308 aa8.19□□□□□ -1.1
PBRM1-207ENST00000409767 GLI2P10070 1586 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 TIAM1Q13009 1591 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 LRRC59Q96AG4 307 aaKnown RBP8.18□□□□□ -1.1
PBRM1-207ENST00000409767 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 AMPHP49418 695 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 LAS1LQ9Y4W2 734 aaKnown RBP8.18□□□□□ -1.1
PBRM1-207ENST00000409767 ARAP3Q8WWN8 1544 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 CFAP43Q8NDM7 1665 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 DIP2BQ9P265 1576 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 MSH5O43196 834 aa8.18□□□□□ -1.1
PBRM1-207ENST00000409767 HFM1A2PYH4 1435 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 NEUROD2Q15784 382 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 PRDM11Q9NQV5 511 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 ITSN2Q9NZM3 1697 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 ANKRD30BQ9BXX2 1392 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 HDAC5Q9UQL6 1122 aa8.17□□□□□ -1.1
PBRM1-207ENST00000409767 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
PBRM1-207ENST00000409767 LMOD3Q0VAK6 560 aa8.16□□□□□ -1.1
PBRM1-207ENST00000409767 MLH3Q9UHC1 1453 aa8.16□□□□□ -1.1
PBRM1-207ENST00000409767 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
PBRM1-207ENST00000409767 DUOX2Q9NRD8 1548 aa8.16□□□□□ -1.1
PBRM1-207ENST00000409767 TBX22Q9Y458 520 aa8.15□□□□□ -1.1
PBRM1-207ENST00000409767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.15□□□□□ -1.1
PBRM1-207ENST00000409767 NLRP13Q86W25 1043 aa8.15□□□□□ -1.11
PBRM1-207ENST00000409767 RBM33Q96EV2 1170 aaKnown RBP8.15□□□□□ -1.11
PBRM1-207ENST00000409767 STRN4Q9NRL3 753 aa8.15□□□□□ -1.11
PBRM1-207ENST00000409767 PTPRMP28827 1452 aa8.15□□□□□ -1.11
PBRM1-207ENST00000409767 ERBINQ96RT1 1412 aa8.15□□□□□ -1.11
PBRM1-207ENST00000409767 NPHP3Q7Z494 1330 aa8.14□□□□□ -1.11
PBRM1-207ENST00000409767 C8orf37Q96NL8 207 aa8.14□□□□□ -1.11
PBRM1-207ENST00000409767 SAMD9Q5K651 1589 aa8.14□□□□□ -1.11
PBRM1-207ENST00000409767 ROCK1Q13464 1354 aa8.14□□□□□ -1.11
PBRM1-207ENST00000409767 IPO8O15397 1037 aaKnown RBP8.14□□□□□ -1.11
PBRM1-207ENST00000409767 ZNF772Q68DY9 489 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-207ENST00000409767 TMEM132EQ6IEE7 984 aa8.14□□□□□ -1.11
PBRM1-207ENST00000409767 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 ABTB2Q8N961 1025 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 PTPRKQ15262 1439 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 RIMS2Q9UQ26 1411 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 ABCC5O15440 1437 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 NLRP6P59044 892 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 LTV1Q96GA3 475 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 COG3Q96JB2 828 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 TMX4Q9H1E5 349 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 SLAIN2Q9P270 581 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-207ENST00000409767 MYO5CQ9NQX4 1742 aa8.13□□□□□ -1.11
PBRM1-207ENST00000409767 PMFBP1Q8TBY8 1022 aa8.12□□□□□ -1.11
PBRM1-207ENST00000409767 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
PBRM1-207ENST00000409767 ZNF335Q9H4Z2 1342 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-207ENST00000409767 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
PBRM1-207ENST00000409767 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
PBRM1-207ENST00000409767 CGNL1Q0VF96 1302 aa8.12□□□□□ -1.11
PBRM1-207ENST00000409767 CENPJQ9HC77 1338 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-207ENST00000409767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.12□□□□□ -1.11
PBRM1-207ENST00000409767 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
PBRM1-207ENST00000409767 FOXO3O43524 673 aa8.11□□□□□ -1.11
PBRM1-207ENST00000409767 OS9Q13438 667 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-207ENST00000409767 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
PBRM1-207ENST00000409767 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 HECW2Q9P2P5 1572 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 XPCQ01831 940 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-207ENST00000409767 KRT28Q7Z3Y7 464 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 NLRP1Q9C000 1473 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 NCOA1Q15788 1441 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 CFAP70Q5T0N1 1121 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 TOM1L2Q6ZVM7 507 aa8.1□□□□□ -1.11
PBRM1-207ENST00000409767 SYTL4Q96C24 671 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-207ENST00000409767 NPATQ14207 1427 aa8.09□□□□□ -1.11
PBRM1-207ENST00000409767 NGEFQ8N5V2 710 aa8.09□□□□□ -1.11
PBRM1-207ENST00000409767 RAPGEF4Q8WZA2 1011 aa8.09□□□□□ -1.11
PBRM1-207ENST00000409767 ZNF692Q9BU19 519 aaPredicted RBP8.09□□□□□ -1.11
PBRM1-207ENST00000409767 STK31Q9BXU1 1019 aa8.09□□□□□ -1.11
PBRM1-207ENST00000409767 BECN1Q14457 450 aa8.09□□□□□ -1.12
PBRM1-207ENST00000409767 FRAT1Q92837 279 aaPredicted RBP8.09□□□□□ -1.12
PBRM1-207ENST00000409767 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
PBRM1-207ENST00000409767 NBPF8Q3BBV2 869 aa8.08□□□□□ -1.12
PBRM1-207ENST00000409767 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
PBRM1-207ENST00000409767 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
PBRM1-207ENST00000409767 PTPN23Q9H3S7 1636 aa8.08□□□□□ -1.12
PBRM1-207ENST00000409767 RXRBP28702 533 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms