RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
SUMO1-207ENST00000409498 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
SUMO1-207ENST00000409498 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
SUMO1-207ENST00000409498 SPATA31E1Q6ZUB1 1445 aa21.72■■□□□ 1.07
SUMO1-207ENST00000409498 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
SUMO1-207ENST00000409498 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.71■■□□□ 1.07
SUMO1-207ENST00000409498 DHX57Q6P158 1386 aaKnown RBP21.71■■□□□ 1.07
SUMO1-207ENST00000409498 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
SUMO1-207ENST00000409498 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
SUMO1-207ENST00000409498 IQGAP1P46940 1657 aa21.68■■□□□ 1.06
SUMO1-207ENST00000409498 NEXMIFQ5QGS0 1516 aa21.67■■□□□ 1.06
SUMO1-207ENST00000409498 PLEKHG1Q9ULL1 1385 aa21.66■■□□□ 1.06
SUMO1-207ENST00000409498 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
SUMO1-207ENST00000409498 PPLO60437 1756 aa21.61■■□□□ 1.05
SUMO1-207ENST00000409498 IFT172Q9UG01 1749 aa21.6■■□□□ 1.05
SUMO1-207ENST00000409498 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
SUMO1-207ENST00000409498 PPP1R15AO75807 674 aaPredicted RBP21.59■■□□□ 1.05
SUMO1-207ENST00000409498 SETBP1Q9Y6X0 1596 aa21.57■■□□□ 1.04
SUMO1-207ENST00000409498 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
SUMO1-207ENST00000409498 RGL3Q3MIN7 710 aa21.56■■□□□ 1.04
SUMO1-207ENST00000409498 NUTM2DQ5VT03 806 aaPredicted RBP21.56■■□□□ 1.04
SUMO1-207ENST00000409498 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
SUMO1-207ENST00000409498 DIP2AQ14689 1571 aa21.56■■□□□ 1.04
SUMO1-207ENST00000409498 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
SUMO1-207ENST00000409498 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
SUMO1-207ENST00000409498 STAC3Q96MF2 364 aa21.55■■□□□ 1.04
SUMO1-207ENST00000409498 MYOM2P54296 1465 aa21.53■■□□□ 1.04
SUMO1-207ENST00000409498 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
SUMO1-207ENST00000409498 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.03
SUMO1-207ENST00000409498 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
SUMO1-207ENST00000409498 SLC26A8Q96RN1 970 aa21.51■■□□□ 1.03
SUMO1-207ENST00000409498 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
SUMO1-207ENST00000409498 SIN3AQ96ST3 1273 aa21.49■■□□□ 1.03
SUMO1-207ENST00000409498 BCANQ96GW7 911 aa21.48■■□□□ 1.03
SUMO1-207ENST00000409498 CPS1P31327 1500 aa21.48■■□□□ 1.03
SUMO1-207ENST00000409498 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
SUMO1-207ENST00000409498 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
SUMO1-207ENST00000409498 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
SUMO1-207ENST00000409498 STRCP1A6NGW2 1772 aa21.47■■□□□ 1.03
SUMO1-207ENST00000409498 KCNA6P17658 529 aa21.47■■□□□ 1.03
SUMO1-207ENST00000409498 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
SUMO1-207ENST00000409498 NWD1Q149M9 1564 aa21.47■■□□□ 1.03
SUMO1-207ENST00000409498 ALKQ9UM73 1620 aa21.46■■□□□ 1.03
SUMO1-207ENST00000409498 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
SUMO1-207ENST00000409498 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
SUMO1-207ENST00000409498 METP08581 1390 aa21.42■■□□□ 1.02
SUMO1-207ENST00000409498 NKTRP30414 1462 aaKnown RBP21.41■■□□□ 1.02
SUMO1-207ENST00000409498 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
SUMO1-207ENST00000409498 C14orf93Q9H972 538 aaKnown RBP21.41■■□□□ 1.02
SUMO1-207ENST00000409498 PTPRUQ92729 1446 aa21.4■■□□□ 1.02
SUMO1-207ENST00000409498 PRAG1Q86YV5 1406 aa21.39■■□□□ 1.02
SUMO1-207ENST00000409498 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
SUMO1-207ENST00000409498 L3MBTL2Q969R5 705 aa21.39■■□□□ 1.01
SUMO1-207ENST00000409498 LAMC1P11047 1609 aa21.39■■□□□ 1.01
SUMO1-207ENST00000409498 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.01
SUMO1-207ENST00000409498 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
SUMO1-207ENST00000409498 AMOTL2Q9Y2J4 779 aa21.37■■□□□ 1.01
SUMO1-207ENST00000409498 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
SUMO1-207ENST00000409498 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
SUMO1-207ENST00000409498 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
SUMO1-207ENST00000409498 CFAP70Q5T0N1 1121 aa21.34■■□□□ 1.01
SUMO1-207ENST00000409498 KIAA1210Q9ULL0 1709 aa21.33■■□□□ 1.01
SUMO1-207ENST00000409498 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
SUMO1-207ENST00000409498 TIMELESSQ9UNS1 1208 aa21.32■■□□□ 1
SUMO1-207ENST00000409498 TECPR2O15040 1411 aa21.31■■□□□ 1
SUMO1-207ENST00000409498 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
SUMO1-207ENST00000409498 TONSLQ96HA7 1378 aa21.31■■□□□ 1
SUMO1-207ENST00000409498 ABCC11Q96J66 1382 aa21.31■■□□□ 1
SUMO1-207ENST00000409498 ADGRB1O14514 1584 aa21.31■■□□□ 1
SUMO1-207ENST00000409498 PTCH1Q13635 1447 aa21.3■■□□□ 1
SUMO1-207ENST00000409498 PROSER2Q86WR7 435 aaPredicted RBP21.3■■□□□ 1
SUMO1-207ENST00000409498 TMEM94Q12767 1356 aa21.29■■□□□ 1
SUMO1-207ENST00000409498 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
SUMO1-207ENST00000409498 SIRT1Q96EB6 747 aa21.29■■□□□ 1
SUMO1-207ENST00000409498 KNDC1Q76NI1 1749 aa21.29■■□□□ 1
SUMO1-207ENST00000409498 YTHDC2Q9H6S0 1430 aaKnown RBP21.28■■□□□ 1
SUMO1-207ENST00000409498 TMEM132EQ6IEE7 984 aa21.27■■□□□ 1
SUMO1-207ENST00000409498 ROBO2Q9HCK4 1378 aa21.24■□□□□ 0.99
SUMO1-207ENST00000409498 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
SUMO1-207ENST00000409498 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
SUMO1-207ENST00000409498 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
SUMO1-207ENST00000409498 NBPF8Q3BBV2 869 aa21.21■□□□□ 0.99
SUMO1-207ENST00000409498 NBPF1Q3BBV0 1214 aa21.19■□□□□ 0.98
SUMO1-207ENST00000409498 FBXO41Q8TF61 875 aa21.19■□□□□ 0.98
SUMO1-207ENST00000409498 RBM33Q96EV2 1170 aaKnown RBP21.19■□□□□ 0.98
SUMO1-207ENST00000409498 C19orf44Q9H6X5 657 aa21.19■□□□□ 0.98
SUMO1-207ENST00000409498 STK26Q9P289 416 aa21.18■□□□□ 0.98
SUMO1-207ENST00000409498 MSH6P52701 1360 aa21.18■□□□□ 0.98
SUMO1-207ENST00000409498 DCCP43146 1447 aa21.18■□□□□ 0.98
SUMO1-207ENST00000409498 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
SUMO1-207ENST00000409498 TOM1O60784 492 aa21.17■□□□□ 0.98
SUMO1-207ENST00000409498 GPRASP1Q5JY77 1395 aa21.17■□□□□ 0.98
SUMO1-207ENST00000409498 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.16■□□□□ 0.98
SUMO1-207ENST00000409498 RALGAPBQ86X10 1494 aa21.14■□□□□ 0.98
SUMO1-207ENST00000409498 NALCNQ8IZF0 1738 aa21.14■□□□□ 0.97
SUMO1-207ENST00000409498 PLEKHH1Q9ULM0 1364 aa21.13■□□□□ 0.97
SUMO1-207ENST00000409498 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
SUMO1-207ENST00000409498 WAPLQ7Z5K2 1190 aa21.13■□□□□ 0.97
SUMO1-207ENST00000409498 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
SUMO1-207ENST00000409498 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms