RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CCDC144AA2RUR9 1427 aa29.26■■■□□ 2.27
PDLIM2-207ENST00000409417 IQGAP1P46940 1657 aa29.24■■■□□ 2.27
PDLIM2-207ENST00000409417 ZNF326Q5BKZ1 582 aaKnown RBP29.23■■■□□ 2.27
PDLIM2-207ENST00000409417 PPP1R15AO75807 674 aaPredicted RBP29.22■■■□□ 2.27
PDLIM2-207ENST00000409417 ZNF335Q9H4Z2 1342 aaPredicted RBP29.2■■■□□ 2.26
PDLIM2-207ENST00000409417 KIF1BO60333 1816 aa29.19■■■□□ 2.26
PDLIM2-207ENST00000409417 ANKRD30BQ9BXX2 1392 aa29.18■■■□□ 2.26
PDLIM2-207ENST00000409417 PLEKHG1Q9ULL1 1385 aa29.18■■■□□ 2.26
PDLIM2-207ENST00000409417 NUTM2DQ5VT03 806 aaPredicted RBP29.17■■■□□ 2.26
PDLIM2-207ENST00000409417 BCANQ96GW7 911 aa29.14■■■□□ 2.26
PDLIM2-207ENST00000409417 RPGRIP1LQ68CZ1 1315 aa29.14■■■□□ 2.25
PDLIM2-207ENST00000409417 LTBP4Q8N2S1 1624 aa29.14■■■□□ 2.25
PDLIM2-207ENST00000409417 SPATA31E1Q6ZUB1 1445 aa29.13■■■□□ 2.25
PDLIM2-207ENST00000409417 SLC26A8Q96RN1 970 aa29.12■■■□□ 2.25
PDLIM2-207ENST00000409417 CERKQ8TCT0 537 aa29.11■■■□□ 2.25
PDLIM2-207ENST00000409417 NEXMIFQ5QGS0 1516 aa29.1■■■□□ 2.25
PDLIM2-207ENST00000409417 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
PDLIM2-207ENST00000409417 RGL3Q3MIN7 710 aa29.08■■■□□ 2.25
PDLIM2-207ENST00000409417 VGFO15240 615 aaPredicted RBP29.07■■■□□ 2.24
PDLIM2-207ENST00000409417 TBX22Q9Y458 520 aa29.06■■■□□ 2.24
PDLIM2-207ENST00000409417 ADAMTS13Q76LX8 1427 aa29.03■■■□□ 2.24
PDLIM2-207ENST00000409417 CPS1P31327 1500 aa29.02■■■□□ 2.24
PDLIM2-207ENST00000409417 KCNA6P17658 529 aa28.99■■■□□ 2.23
PDLIM2-207ENST00000409417 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
PDLIM2-207ENST00000409417 PCGF6Q9BYE7 350 aa28.98■■■□□ 2.23
PDLIM2-207ENST00000409417 DIP2AQ14689 1571 aa28.98■■■□□ 2.23
PDLIM2-207ENST00000409417 DHX57Q6P158 1386 aaKnown RBP28.97■■■□□ 2.23
PDLIM2-207ENST00000409417 PPLO60437 1756 aa28.97■■■□□ 2.23
PDLIM2-207ENST00000409417 IQSEC2Q5JU85 1478 aa28.95■■■□□ 2.23
PDLIM2-207ENST00000409417 PIK3R4Q99570 1358 aa28.95■■■□□ 2.23
PDLIM2-207ENST00000409417 STRCP1A6NGW2 1772 aa28.95■■■□□ 2.22
PDLIM2-207ENST00000409417 NRXN3Q9Y4C0 1643 aa28.95■■■□□ 2.22
PDLIM2-207ENST00000409417 ADGRF5Q8IZF2 1346 aa28.93■■■□□ 2.22
PDLIM2-207ENST00000409417 LRRC7Q96NW7 1537 aa28.9■■■□□ 2.22
PDLIM2-207ENST00000409417 FBXO41Q8TF61 875 aa28.89■■■□□ 2.22
PDLIM2-207ENST00000409417 NWD1Q149M9 1564 aa28.89■■■□□ 2.21
PDLIM2-207ENST00000409417 IFT172Q9UG01 1749 aa28.89■■■□□ 2.21
PDLIM2-207ENST00000409417 METP08581 1390 aa28.88■■■□□ 2.21
PDLIM2-207ENST00000409417 NKTRP30414 1462 aaKnown RBP28.87■■■□□ 2.21
PDLIM2-207ENST00000409417 CHD2O14647 1828 aaKnown RBP28.86■■■□□ 2.21
PDLIM2-207ENST00000409417 MYOM2P54296 1465 aa28.86■■■□□ 2.21
PDLIM2-207ENST00000409417 STAC3Q96MF2 364 aa28.85■■■□□ 2.21
PDLIM2-207ENST00000409417 PROSER2Q86WR7 435 aaPredicted RBP28.85■■■□□ 2.21
PDLIM2-207ENST00000409417 AMOTL2Q9Y2J4 779 aa28.85■■■□□ 2.21
PDLIM2-207ENST00000409417 PIK3C2GO75747 1445 aa28.84■■■□□ 2.21
PDLIM2-207ENST00000409417 ALKQ9UM73 1620 aa28.84■■■□□ 2.21
PDLIM2-207ENST00000409417 DCAF11Q8TEB1 546 aa28.84■■■□□ 2.21
PDLIM2-207ENST00000409417 NRXN1Q9ULB1 1477 aa28.83■■■□□ 2.21
PDLIM2-207ENST00000409417 PTPRUQ92729 1446 aa28.83■■■□□ 2.21
PDLIM2-207ENST00000409417 TMEM94Q12767 1356 aa28.82■■■□□ 2.2
PDLIM2-207ENST00000409417 SIN3AQ96ST3 1273 aa28.81■■■□□ 2.2
PDLIM2-207ENST00000409417 KDM2AQ9Y2K7 1162 aa28.79■■■□□ 2.2
PDLIM2-207ENST00000409417 ILDR1Q86SU0 546 aaPredicted RBP28.78■■■□□ 2.2
PDLIM2-207ENST00000409417 C14orf93Q9H972 538 aaKnown RBP28.78■■■□□ 2.2
PDLIM2-207ENST00000409417 SETD1AO15047 1707 aaKnown RBP28.77■■■□□ 2.2
PDLIM2-207ENST00000409417 UBAP1LF5GYI3 381 aa28.77■■■□□ 2.2
PDLIM2-207ENST00000409417 RBM33Q96EV2 1170 aaKnown RBP28.76■■■□□ 2.19
PDLIM2-207ENST00000409417 NEUROD1Q13562 356 aa28.75■■■□□ 2.19
PDLIM2-207ENST00000409417 XRN1Q8IZH2 1706 aaKnown RBP28.74■■■□□ 2.19
PDLIM2-207ENST00000409417 NCOA3Q9Y6Q9 1424 aa28.73■■■□□ 2.19
PDLIM2-207ENST00000409417 TOM1O60784 492 aa28.72■■■□□ 2.19
PDLIM2-207ENST00000409417 CFAP70Q5T0N1 1121 aa28.72■■■□□ 2.19
PDLIM2-207ENST00000409417 XIRP1Q702N8 1843 aaKnown RBP28.71■■■□□ 2.19
PDLIM2-207ENST00000409417 L3MBTL2Q969R5 705 aa28.7■■■□□ 2.18
PDLIM2-207ENST00000409417 PRAG1Q86YV5 1406 aa28.69■■■□□ 2.18
PDLIM2-207ENST00000409417 TMEM132EQ6IEE7 984 aa28.69■■■□□ 2.18
PDLIM2-207ENST00000409417 PTCH1Q13635 1447 aa28.67■■■□□ 2.18
PDLIM2-207ENST00000409417 C14orf37Q86TY3 774 aa28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 MSH6P52701 1360 aa28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 LAMC1P11047 1609 aa28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 ASXL1Q8IXJ9 1541 aa28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 ROBO2Q9HCK4 1378 aa28.66■■■□□ 2.18
PDLIM2-207ENST00000409417 ABCC11Q96J66 1382 aa28.64■■■□□ 2.18
PDLIM2-207ENST00000409417 C19orf44Q9H6X5 657 aa28.64■■■□□ 2.17
PDLIM2-207ENST00000409417 STK26Q9P289 416 aa28.64■■■□□ 2.17
PDLIM2-207ENST00000409417 TECPR2O15040 1411 aa28.62■■■□□ 2.17
PDLIM2-207ENST00000409417 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
PDLIM2-207ENST00000409417 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
PDLIM2-207ENST00000409417 CLSPNQ9HAW4 1339 aa28.58■■■□□ 2.17
PDLIM2-207ENST00000409417 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
PDLIM2-207ENST00000409417 SCAF1Q9H7N4 1312 aaKnown RBP28.56■■■□□ 2.16
PDLIM2-207ENST00000409417 CADPS2Q86UW7 1296 aa28.56■■■□□ 2.16
PDLIM2-207ENST00000409417 SIRT1Q96EB6 747 aa28.56■■■□□ 2.16
PDLIM2-207ENST00000409417 TONSLQ96HA7 1378 aa28.56■■■□□ 2.16
PDLIM2-207ENST00000409417 ADGRL3Q9HAR2 1447 aa28.55■■■□□ 2.16
PDLIM2-207ENST00000409417 ATF3P18847 181 aa28.55■■■□□ 2.16
PDLIM2-207ENST00000409417 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
PDLIM2-207ENST00000409417 DCCP43146 1447 aa28.53■■■□□ 2.16
PDLIM2-207ENST00000409417 WAPLQ7Z5K2 1190 aa28.53■■■□□ 2.16
PDLIM2-207ENST00000409417 FAM135BQ49AJ0 1406 aa28.52■■■□□ 2.16
PDLIM2-207ENST00000409417 KNDC1Q76NI1 1749 aa28.51■■■□□ 2.16
PDLIM2-207ENST00000409417 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.51■■■□□ 2.16
PDLIM2-207ENST00000409417 KIAA1210Q9ULL0 1709 aa28.49■■■□□ 2.15
PDLIM2-207ENST00000409417 CCER1Q8TC90 406 aaPredicted RBP28.48■■■□□ 2.15
PDLIM2-207ENST00000409417 PLEKHH1Q9ULM0 1364 aa28.48■■■□□ 2.15
PDLIM2-207ENST00000409417 DLC1Q96QB1 1528 aa28.47■■■□□ 2.15
PDLIM2-207ENST00000409417 NBPF1Q3BBV0 1214 aa28.47■■■□□ 2.15
PDLIM2-207ENST00000409417 TRAK1Q9UPV9 953 aa28.47■■■□□ 2.15
PDLIM2-207ENST00000409417 NALCNQ8IZF0 1738 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms