RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 TMEM132EQ6IEE7 984 aa17.68■□□□□ 0.42
ITGA6-202ENST00000409080 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
ITGA6-202ENST00000409080 NOL10Q9BSC4 688 aaKnown RBP17.67■□□□□ 0.42
ITGA6-202ENST00000409080 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
ITGA6-202ENST00000409080 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
ITGA6-202ENST00000409080 RRP7AQ9Y3A4 280 aaKnown RBP17.66■□□□□ 0.42
ITGA6-202ENST00000409080 CABP2Q9NPB3 220 aa17.66■□□□□ 0.42
ITGA6-202ENST00000409080 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
ITGA6-202ENST00000409080 ZNF692Q9BU19 519 aaPredicted RBP17.66■□□□□ 0.42
ITGA6-202ENST00000409080 CLSTN1O94985 981 aa17.65■□□□□ 0.42
ITGA6-202ENST00000409080 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.42
ITGA6-202ENST00000409080 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.41
ITGA6-202ENST00000409080 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
ITGA6-202ENST00000409080 AMOTL1Q8IY63 956 aa17.64■□□□□ 0.41
ITGA6-202ENST00000409080 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
ITGA6-202ENST00000409080 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
ITGA6-202ENST00000409080 CFAP70Q5T0N1 1121 aa17.63■□□□□ 0.41
ITGA6-202ENST00000409080 PRAM1Q96QH2 718 aa17.62■□□□□ 0.41
ITGA6-202ENST00000409080 HSP90B1P14625 803 aaKnown RBP17.62■□□□□ 0.41
ITGA6-202ENST00000409080 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
ITGA6-202ENST00000409080 CLUAP1Q96AJ1 413 aa17.62■□□□□ 0.41
ITGA6-202ENST00000409080 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
ITGA6-202ENST00000409080 ADGRL1O94910 1474 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 RIPK4P57078 832 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 CCDC34Q96HJ3 373 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 NUTM2GQ5VZR2 741 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 GNAI1P63096 354 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
ITGA6-202ENST00000409080 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
ITGA6-202ENST00000409080 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 ROCK1Q13464 1354 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
ITGA6-202ENST00000409080 ELL2O00472 640 aaPredicted RBP17.6■□□□□ 0.41
ITGA6-202ENST00000409080 TRIM34Q9BYJ4 488 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 KIAA1107Q9UPP5 1409 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 CHMP4CQ96CF2 233 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 TOMM22Q9NS69 142 aa17.6■□□□□ 0.41
ITGA6-202ENST00000409080 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
ITGA6-202ENST00000409080 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
ITGA6-202ENST00000409080 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
ITGA6-202ENST00000409080 KIF14Q15058 1648 aa17.59■□□□□ 0.41
ITGA6-202ENST00000409080 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
ITGA6-202ENST00000409080 GGNBP2Q9H3C7 697 aa17.59■□□□□ 0.41
ITGA6-202ENST00000409080 KLHL34Q8N239 644 aa17.58■□□□□ 0.41
ITGA6-202ENST00000409080 TSPYL4Q9UJ04 414 aa17.58■□□□□ 0.41
ITGA6-202ENST00000409080 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.41
ITGA6-202ENST00000409080 DAPK1P53355 1430 aa17.58■□□□□ 0.4
ITGA6-202ENST00000409080 VPS37DQ86XT2 251 aa17.58■□□□□ 0.4
ITGA6-202ENST00000409080 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
ITGA6-202ENST00000409080 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 NUTM2AQ8IVF1 878 aaPredicted RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
ITGA6-202ENST00000409080 STRN4Q9NRL3 753 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 RTEL1-TNFRSF6BF6WH68 1400 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 PIP4K2BP78356 416 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 TIAM1Q13009 1591 aa17.56■□□□□ 0.4
ITGA6-202ENST00000409080 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
ITGA6-202ENST00000409080 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
ITGA6-202ENST00000409080 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
ITGA6-202ENST00000409080 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
ITGA6-202ENST00000409080 APAF1O14727 1248 aa17.54■□□□□ 0.4
ITGA6-202ENST00000409080 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
ITGA6-202ENST00000409080 PLCB2Q00722 1185 aa17.53■□□□□ 0.4
ITGA6-202ENST00000409080 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
ITGA6-202ENST00000409080 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
ITGA6-202ENST00000409080 PTMSP20962 102 aa17.52■□□□□ 0.4
ITGA6-202ENST00000409080 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
ITGA6-202ENST00000409080 WWC1Q8IX03 1113 aa17.52■□□□□ 0.4
ITGA6-202ENST00000409080 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.39
ITGA6-202ENST00000409080 CTDP1Q9Y5B0 961 aaPredicted RBP17.51■□□□□ 0.39
ITGA6-202ENST00000409080 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
ITGA6-202ENST00000409080 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
ITGA6-202ENST00000409080 RIC3Q7Z5B4 369 aa17.51■□□□□ 0.39
ITGA6-202ENST00000409080 HMOX1P09601 288 aa17.51■□□□□ 0.39
ITGA6-202ENST00000409080 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
ITGA6-202ENST00000409080 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
ITGA6-202ENST00000409080 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
ITGA6-202ENST00000409080 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
ITGA6-202ENST00000409080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.49■□□□□ 0.39
ITGA6-202ENST00000409080 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
ITGA6-202ENST00000409080 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
ITGA6-202ENST00000409080 KIF6Q6ZMV9 814 aa17.49■□□□□ 0.39
ITGA6-202ENST00000409080 RUFY2Q8WXA3 655 aa17.48■□□□□ 0.39
ITGA6-202ENST00000409080 MARCH6O60337 910 aa17.48■□□□□ 0.39
ITGA6-202ENST00000409080 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
ITGA6-202ENST00000409080 IFIT2P09913 472 aaKnown RBP17.48■□□□□ 0.39
ITGA6-202ENST00000409080 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
ITGA6-202ENST00000409080 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
ITGA6-202ENST00000409080 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.39
ITGA6-202ENST00000409080 FANCAO15360 1455 aa17.46■□□□□ 0.39
ITGA6-202ENST00000409080 KCNH5Q8NCM2 988 aa17.46■□□□□ 0.39
ITGA6-202ENST00000409080 RASSF8Q8NHQ8 419 aa17.46■□□□□ 0.39
ITGA6-202ENST00000409080 RBM42Q9BTD8 480 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms