RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 POTEAQ6S8J7 498 aa19.11■□□□□ 0.65
APOBEC3B-204ENST00000407298 ROBO1Q9Y6N7 1651 aa19.11■□□□□ 0.65
APOBEC3B-204ENST00000407298 ADGRB3O60242 1522 aa19.1■□□□□ 0.65
APOBEC3B-204ENST00000407298 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
APOBEC3B-204ENST00000407298 PPP1R15AO75807 674 aaPredicted RBP19.09■□□□□ 0.65
APOBEC3B-204ENST00000407298 RPRD2Q5VT52 1461 aaKnown RBP19.09■□□□□ 0.65
APOBEC3B-204ENST00000407298 NWD1Q149M9 1564 aa19.07■□□□□ 0.64
APOBEC3B-204ENST00000407298 JCADQ9P266 1359 aa19.06■□□□□ 0.64
APOBEC3B-204ENST00000407298 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
APOBEC3B-204ENST00000407298 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
APOBEC3B-204ENST00000407298 ADGRL2O95490 1459 aa19.05■□□□□ 0.64
APOBEC3B-204ENST00000407298 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
APOBEC3B-204ENST00000407298 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
APOBEC3B-204ENST00000407298 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
APOBEC3B-204ENST00000407298 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
APOBEC3B-204ENST00000407298 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
APOBEC3B-204ENST00000407298 ZFYVE9O95405 1425 aa19.02■□□□□ 0.64
APOBEC3B-204ENST00000407298 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
APOBEC3B-204ENST00000407298 PHLPP1O60346 1717 aa19.02■□□□□ 0.63
APOBEC3B-204ENST00000407298 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
APOBEC3B-204ENST00000407298 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
APOBEC3B-204ENST00000407298 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
APOBEC3B-204ENST00000407298 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
APOBEC3B-204ENST00000407298 ATF3P18847 181 aa18.99■□□□□ 0.63
APOBEC3B-204ENST00000407298 C19orf44Q9H6X5 657 aa18.99■□□□□ 0.63
APOBEC3B-204ENST00000407298 MEX3CQ5U5Q3 659 aaKnown RBP18.98■□□□□ 0.63
APOBEC3B-204ENST00000407298 ZNF772Q68DY9 489 aaPredicted RBP18.98■□□□□ 0.63
APOBEC3B-204ENST00000407298 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
APOBEC3B-204ENST00000407298 TMEM131LA2VDJ0 1609 aa18.96■□□□□ 0.63
APOBEC3B-204ENST00000407298 GCC2Q8IWJ2 1684 aa18.94■□□□□ 0.62
APOBEC3B-204ENST00000407298 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
APOBEC3B-204ENST00000407298 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
APOBEC3B-204ENST00000407298 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
APOBEC3B-204ENST00000407298 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
APOBEC3B-204ENST00000407298 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
APOBEC3B-204ENST00000407298 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
APOBEC3B-204ENST00000407298 AHDC1Q5TGY3 1603 aaPredicted RBP18.89■□□□□ 0.61
APOBEC3B-204ENST00000407298 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
APOBEC3B-204ENST00000407298 UNC13BO14795 1591 aa18.87■□□□□ 0.61
APOBEC3B-204ENST00000407298 TRPM2O94759 1503 aa18.87■□□□□ 0.61
APOBEC3B-204ENST00000407298 RXRBP28702 533 aa18.87■□□□□ 0.61
APOBEC3B-204ENST00000407298 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
APOBEC3B-204ENST00000407298 TRIM52Q96A61 297 aa18.86■□□□□ 0.61
APOBEC3B-204ENST00000407298 LRP6O75581 1613 aa18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 DCCP43146 1447 aa18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 UPF1Q92900 1129 aaKnown RBP eCLIP18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 SETD1AO15047 1707 aaKnown RBP18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
APOBEC3B-204ENST00000407298 NUP155O75694 1391 aa18.84■□□□□ 0.61
APOBEC3B-204ENST00000407298 E9PCH4 1651 aa18.84■□□□□ 0.61
APOBEC3B-204ENST00000407298 NUTM2BA6NNL0 878 aaPredicted RBP18.82■□□□□ 0.6
APOBEC3B-204ENST00000407298 NUTM2EB1AL46 878 aaPredicted RBP18.82■□□□□ 0.6
APOBEC3B-204ENST00000407298 NUTM2AQ8IVF1 878 aaPredicted RBP18.82■□□□□ 0.6
APOBEC3B-204ENST00000407298 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
APOBEC3B-204ENST00000407298 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
APOBEC3B-204ENST00000407298 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
APOBEC3B-204ENST00000407298 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
APOBEC3B-204ENST00000407298 PTPRUQ92729 1446 aa18.79■□□□□ 0.6
APOBEC3B-204ENST00000407298 SETD5Q9C0A6 1442 aa18.78■□□□□ 0.6
APOBEC3B-204ENST00000407298 AFF2P51816 1311 aa18.77■□□□□ 0.6
APOBEC3B-204ENST00000407298 ASXL1Q8IXJ9 1541 aa18.76■□□□□ 0.59
APOBEC3B-204ENST00000407298 SETBP1Q9Y6X0 1596 aa18.75■□□□□ 0.59
APOBEC3B-204ENST00000407298 MST1RQ04912 1400 aa18.74■□□□□ 0.59
APOBEC3B-204ENST00000407298 ITGAEP38570 1179 aa18.73■□□□□ 0.59
APOBEC3B-204ENST00000407298 QTRT2Q9H974 415 aaKnown RBP18.73■□□□□ 0.59
APOBEC3B-204ENST00000407298 XRN1Q8IZH2 1706 aaKnown RBP18.72■□□□□ 0.59
APOBEC3B-204ENST00000407298 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
APOBEC3B-204ENST00000407298 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
APOBEC3B-204ENST00000407298 METP08581 1390 aa18.71■□□□□ 0.59
APOBEC3B-204ENST00000407298 ADGRL3Q9HAR2 1447 aa18.7■□□□□ 0.58
APOBEC3B-204ENST00000407298 NHSL1Q5SYE7 1610 aa18.7■□□□□ 0.58
APOBEC3B-204ENST00000407298 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
APOBEC3B-204ENST00000407298 NRXN3Q9Y4C0 1643 aa18.69■□□□□ 0.58
APOBEC3B-204ENST00000407298 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
APOBEC3B-204ENST00000407298 PNPLA6Q8IY17 1366 aa18.68■□□□□ 0.58
APOBEC3B-204ENST00000407298 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
APOBEC3B-204ENST00000407298 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
APOBEC3B-204ENST00000407298 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
APOBEC3B-204ENST00000407298 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
APOBEC3B-204ENST00000407298 RGS12O14924 1447 aa18.62■□□□□ 0.57
APOBEC3B-204ENST00000407298 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
APOBEC3B-204ENST00000407298 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
APOBEC3B-204ENST00000407298 SOS2Q07890 1332 aaPredicted RBP18.6■□□□□ 0.57
APOBEC3B-204ENST00000407298 RPGRIP1LQ68CZ1 1315 aa18.6■□□□□ 0.57
APOBEC3B-204ENST00000407298 USP21Q9UK80 565 aa18.6■□□□□ 0.57
APOBEC3B-204ENST00000407298 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
APOBEC3B-204ENST00000407298 ATAD2Q6PL18 1390 aa18.59■□□□□ 0.57
APOBEC3B-204ENST00000407298 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
APOBEC3B-204ENST00000407298 KIF1BO60333 1816 aa18.58■□□□□ 0.57
APOBEC3B-204ENST00000407298 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
APOBEC3B-204ENST00000407298 CLTCL1P53675 1640 aa18.57■□□□□ 0.56
APOBEC3B-204ENST00000407298 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
APOBEC3B-204ENST00000407298 LAMC1P11047 1609 aa18.56■□□□□ 0.56
APOBEC3B-204ENST00000407298 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
APOBEC3B-204ENST00000407298 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
APOBEC3B-204ENST00000407298 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
APOBEC3B-204ENST00000407298 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
APOBEC3B-204ENST00000407298 SRCAPQ6ZRS2 3230 aa18.53■□□□□ 0.56
APOBEC3B-204ENST00000407298 ESCO1Q5FWF5 840 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms