RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
TSPAN9-202ENST00000407263 NRXN3Q9Y4C0 1643 aa15.25■□□□□ 0.03
TSPAN9-202ENST00000407263 LTKP29376 864 aa15.24■□□□□ 0.03
TSPAN9-202ENST00000407263 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
TSPAN9-202ENST00000407263 ZNF335Q9H4Z2 1342 aaPredicted RBP15.22■□□□□ 0.03
TSPAN9-202ENST00000407263 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
TSPAN9-202ENST00000407263 SETD1AO15047 1707 aaKnown RBP15.21■□□□□ 0.03
TSPAN9-202ENST00000407263 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-202ENST00000407263 NUTM2DQ5VT03 806 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-202ENST00000407263 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
TSPAN9-202ENST00000407263 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-202ENST00000407263 DIP2AQ14689 1571 aa15.2■□□□□ 0.02
TSPAN9-202ENST00000407263 CHD2O14647 1828 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-202ENST00000407263 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
TSPAN9-202ENST00000407263 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
TSPAN9-202ENST00000407263 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
TSPAN9-202ENST00000407263 SETBP1Q9Y6X0 1596 aa15.19■□□□□ 0.02
TSPAN9-202ENST00000407263 PLEKHG1Q9ULL1 1385 aa15.18■□□□□ 0.02
TSPAN9-202ENST00000407263 CPS1P31327 1500 aa15.17■□□□□ 0.02
TSPAN9-202ENST00000407263 BCANQ96GW7 911 aa15.16■□□□□ 0.02
TSPAN9-202ENST00000407263 SPATA31E1Q6ZUB1 1445 aa15.16■□□□□ 0.02
TSPAN9-202ENST00000407263 HRCP23327 699 aa15.14■□□□□ 0.01
TSPAN9-202ENST00000407263 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
TSPAN9-202ENST00000407263 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
TSPAN9-202ENST00000407263 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
TSPAN9-202ENST00000407263 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
TSPAN9-202ENST00000407263 SLC26A8Q96RN1 970 aa15.13■□□□□ 0.01
TSPAN9-202ENST00000407263 LAMC1P11047 1609 aa15.11■□□□□ 0.01
TSPAN9-202ENST00000407263 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
TSPAN9-202ENST00000407263 ALKQ9UM73 1620 aa15.1■□□□□ 0.01
TSPAN9-202ENST00000407263 IQSEC2Q5JU85 1478 aa15.1■□□□□ 0.01
TSPAN9-202ENST00000407263 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
TSPAN9-202ENST00000407263 RGL3Q3MIN7 710 aa15.1■□□□□ 0.01
TSPAN9-202ENST00000407263 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
TSPAN9-202ENST00000407263 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
TSPAN9-202ENST00000407263 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
TSPAN9-202ENST00000407263 MYOM2P54296 1465 aa15.08■□□□□ 0.01
TSPAN9-202ENST00000407263 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
TSPAN9-202ENST00000407263 KNDC1Q76NI1 1749 aa15.07■□□□□ 0
TSPAN9-202ENST00000407263 NALCNQ8IZF0 1738 aa15.06■□□□□ 0
TSPAN9-202ENST00000407263 PIK3C2GO75747 1445 aa15.05■□□□□ -0
TSPAN9-202ENST00000407263 PTPRUQ92729 1446 aa15.05■□□□□ -0
TSPAN9-202ENST00000407263 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
TSPAN9-202ENST00000407263 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
TSPAN9-202ENST00000407263 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
TSPAN9-202ENST00000407263 NRXN1Q9ULB1 1477 aa15.02■□□□□ -0
TSPAN9-202ENST00000407263 METP08581 1390 aa15.02■□□□□ -0
TSPAN9-202ENST00000407263 VGFO15240 615 aaPredicted RBP15.02■□□□□ -0
TSPAN9-202ENST00000407263 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.02□□□□□ -0.01
TSPAN9-202ENST00000407263 PIK3R4Q99570 1358 aa15.01□□□□□ -0.01
TSPAN9-202ENST00000407263 KCNA6P17658 529 aa15.01□□□□□ -0.01
TSPAN9-202ENST00000407263 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
TSPAN9-202ENST00000407263 TMEM94Q12767 1356 aa15□□□□□ -0.01
TSPAN9-202ENST00000407263 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
TSPAN9-202ENST00000407263 KIAA1210Q9ULL0 1709 aa14.99□□□□□ -0.01
TSPAN9-202ENST00000407263 ILDR1Q86SU0 546 aaPredicted RBP14.98□□□□□ -0.01
TSPAN9-202ENST00000407263 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
TSPAN9-202ENST00000407263 ARHGEF28Q8N1W1 1705 aaKnown RBP14.97□□□□□ -0.01
TSPAN9-202ENST00000407263 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
TSPAN9-202ENST00000407263 PROSER2Q86WR7 435 aaPredicted RBP14.96□□□□□ -0.01
TSPAN9-202ENST00000407263 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
TSPAN9-202ENST00000407263 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
TSPAN9-202ENST00000407263 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
TSPAN9-202ENST00000407263 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
TSPAN9-202ENST00000407263 ADGRB1O14514 1584 aa14.95□□□□□ -0.02
TSPAN9-202ENST00000407263 PTCH1Q13635 1447 aa14.95□□□□□ -0.02
TSPAN9-202ENST00000407263 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
TSPAN9-202ENST00000407263 AMOTL2Q9Y2J4 779 aa14.95□□□□□ -0.02
TSPAN9-202ENST00000407263 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
TSPAN9-202ENST00000407263 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
TSPAN9-202ENST00000407263 MSH6P52701 1360 aa14.93□□□□□ -0.02
TSPAN9-202ENST00000407263 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
TSPAN9-202ENST00000407263 C14orf37Q86TY3 774 aa14.92□□□□□ -0.02
TSPAN9-202ENST00000407263 ROBO2Q9HCK4 1378 aa14.92□□□□□ -0.02
TSPAN9-202ENST00000407263 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
TSPAN9-202ENST00000407263 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
TSPAN9-202ENST00000407263 PIP4K2BP78356 416 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 STK26Q9P289 416 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 TECPR2O15040 1411 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
TSPAN9-202ENST00000407263 FMN2Q9NZ56 1722 aa14.89□□□□□ -0.03
TSPAN9-202ENST00000407263 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
TSPAN9-202ENST00000407263 RGPD8O14715 1765 aaPredicted RBP14.89□□□□□ -0.03
TSPAN9-202ENST00000407263 TOM1O60784 492 aa14.88□□□□□ -0.03
TSPAN9-202ENST00000407263 PHLPP1O60346 1717 aa14.88□□□□□ -0.03
TSPAN9-202ENST00000407263 QRICH2Q9H0J4 1663 aa14.87□□□□□ -0.03
TSPAN9-202ENST00000407263 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
TSPAN9-202ENST00000407263 NCOA3Q9Y6Q9 1424 aa14.87□□□□□ -0.03
TSPAN9-202ENST00000407263 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
TSPAN9-202ENST00000407263 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
TSPAN9-202ENST00000407263 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
TSPAN9-202ENST00000407263 DCCP43146 1447 aa14.85□□□□□ -0.03
TSPAN9-202ENST00000407263 L3MBTL2Q969R5 705 aa14.85□□□□□ -0.03
TSPAN9-202ENST00000407263 ADGRB2O60241 1585 aa14.85□□□□□ -0.03
TSPAN9-202ENST00000407263 NHSL1Q5SYE7 1610 aa14.84□□□□□ -0.03
TSPAN9-202ENST00000407263 ABCC11Q96J66 1382 aa14.83□□□□□ -0.04
TSPAN9-202ENST00000407263 MST1RQ04912 1400 aa14.83□□□□□ -0.04
TSPAN9-202ENST00000407263 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms