RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 HNRNPMP52272 730 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMCR8-201ENST00000406438 FOXD4L6Q3SYB3 417 aaPredicted RBP14.71□□□□□ -0.05
SMCR8-201ENST00000406438 FOXD4L3Q6VB84 417 aaPredicted RBP14.71□□□□□ -0.05
SMCR8-201ENST00000406438 ERICH2A1L162 156 aa14.71□□□□□ -0.05
SMCR8-201ENST00000406438 EVC2Q86UK5 1308 aa14.71□□□□□ -0.05
SMCR8-201ENST00000406438 PATL2C9JE40 543 aaKnown RBP14.71□□□□□ -0.06
SMCR8-201ENST00000406438 MEX3CQ5U5Q3 659 aaKnown RBP14.71□□□□□ -0.06
SMCR8-201ENST00000406438 RRP12Q5JTH9 1297 aaKnown RBP14.7□□□□□ -0.06
SMCR8-201ENST00000406438 CPLX1O14810 134 aa14.69□□□□□ -0.06
SMCR8-201ENST00000406438 MYBBP1AQ9BQG0 1328 aaKnown RBP14.69□□□□□ -0.06
SMCR8-201ENST00000406438 TRAK1Q9UPV9 953 aa14.69□□□□□ -0.06
SMCR8-201ENST00000406438 RNF20Q5VTR2 975 aa14.69□□□□□ -0.06
SMCR8-201ENST00000406438 TEX35Q5T0J7 233 aa14.69□□□□□ -0.06
SMCR8-201ENST00000406438 DHX16O60231 1041 aaKnown RBP14.68□□□□□ -0.06
SMCR8-201ENST00000406438 ODF2Q5BJF6 829 aa14.68□□□□□ -0.06
SMCR8-201ENST00000406438 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
SMCR8-201ENST00000406438 ZNF592Q92610 1267 aa14.68□□□□□ -0.06
SMCR8-201ENST00000406438 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
SMCR8-201ENST00000406438 DDX58O95786 925 aaKnown RBP14.68□□□□□ -0.06
SMCR8-201ENST00000406438 FAM161AQ3B820 660 aa14.68□□□□□ -0.06
SMCR8-201ENST00000406438 E9PSI1 815 aa14.67□□□□□ -0.06
SMCR8-201ENST00000406438 FBXW7Q969H0 707 aa14.67□□□□□ -0.06
SMCR8-201ENST00000406438 ZKSCAN2Q63HK3 967 aa14.67□□□□□ -0.06
SMCR8-201ENST00000406438 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
SMCR8-201ENST00000406438 NFXL1Q6ZNB6 911 aa14.67□□□□□ -0.06
SMCR8-201ENST00000406438 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMCR8-201ENST00000406438 EPS15P42566 896 aa14.66□□□□□ -0.06
SMCR8-201ENST00000406438 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
SMCR8-201ENST00000406438 ANO2Q9NQ90 1003 aa14.66□□□□□ -0.06
SMCR8-201ENST00000406438 HOMER1Q86YM7 354 aa14.66□□□□□ -0.06
SMCR8-201ENST00000406438 RUFY1Q96T51 708 aa14.66□□□□□ -0.06
SMCR8-201ENST00000406438 CT47A1Q5JQC4 288 aaPredicted RBP14.65□□□□□ -0.06
SMCR8-201ENST00000406438 SYTL4Q96C24 671 aaPredicted RBP14.65□□□□□ -0.06
SMCR8-201ENST00000406438 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
SMCR8-201ENST00000406438 AK7Q96M32 723 aa14.64□□□□□ -0.07
SMCR8-201ENST00000406438 ZNF771Q7L3S4 317 aaPredicted RBP14.64□□□□□ -0.07
SMCR8-201ENST00000406438 EIF2S2P20042 333 aaKnown RBP14.64□□□□□ -0.07
SMCR8-201ENST00000406438 PSME1Q06323 249 aa14.64□□□□□ -0.07
SMCR8-201ENST00000406438 SAFBQ15424 915 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMCR8-201ENST00000406438 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
SMCR8-201ENST00000406438 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
SMCR8-201ENST00000406438 PANK3Q9H999 370 aa14.63□□□□□ -0.07
SMCR8-201ENST00000406438 BICD2Q8TD16 824 aa14.63□□□□□ -0.07
SMCR8-201ENST00000406438 CDR1P51861 262 aa14.63□□□□□ -0.07
SMCR8-201ENST00000406438 VGFO15240 615 aaPredicted RBP14.62□□□□□ -0.07
SMCR8-201ENST00000406438 BCL2L13Q9BXK5 485 aa14.62□□□□□ -0.07
SMCR8-201ENST00000406438 L3MBTL2Q969R5 705 aa14.62□□□□□ -0.07
SMCR8-201ENST00000406438 SASS6Q6UVJ0 657 aa14.62□□□□□ -0.07
SMCR8-201ENST00000406438 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
SMCR8-201ENST00000406438 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
SMCR8-201ENST00000406438 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMCR8-201ENST00000406438 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
SMCR8-201ENST00000406438 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
SMCR8-201ENST00000406438 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMCR8-201ENST00000406438 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
SMCR8-201ENST00000406438 BRMS1Q9HCU9 246 aa14.61□□□□□ -0.07
SMCR8-201ENST00000406438 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
SMCR8-201ENST00000406438 RDXP35241 583 aaKnown RBP14.6□□□□□ -0.07
SMCR8-201ENST00000406438 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
SMCR8-201ENST00000406438 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
SMCR8-201ENST00000406438 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
SMCR8-201ENST00000406438 CCDC173Q0VFZ6 552 aa14.58□□□□□ -0.07
SMCR8-201ENST00000406438 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.07
SMCR8-201ENST00000406438 ERC2O15083 957 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 XBP1P17861 261 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 GSE1Q14687 1217 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 NECTIN2Q92692 538 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 CECR2Q9BXF3 1484 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 MYO6Q9UM54 1294 aa14.58□□□□□ -0.08
SMCR8-201ENST00000406438 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
SMCR8-201ENST00000406438 INTS3Q68E01 1043 aaKnown RBP14.57□□□□□ -0.08
SMCR8-201ENST00000406438 RALYLQ86SE5 291 aaKnown RBP14.57□□□□□ -0.08
SMCR8-201ENST00000406438 ST20-MTHFSA0A0A6YYL1 179 aa14.57□□□□□ -0.08
SMCR8-201ENST00000406438 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
SMCR8-201ENST00000406438 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
SMCR8-201ENST00000406438 WWC2Q6AWC2 1192 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 RRP1P56182 461 aaKnown RBP14.56□□□□□ -0.08
SMCR8-201ENST00000406438 HSP90AB2PQ58FF8 381 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 NOM1Q5C9Z4 860 aaKnown RBP14.56□□□□□ -0.08
SMCR8-201ENST00000406438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.56□□□□□ -0.08
SMCR8-201ENST00000406438 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
SMCR8-201ENST00000406438 ZFYVE27Q5T4F4 411 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 USP47Q96K76 1375 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 FHOD3Q2V2M9 1422 aa14.56□□□□□ -0.08
SMCR8-201ENST00000406438 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
SMCR8-201ENST00000406438 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
SMCR8-201ENST00000406438 MIA2Q96PC5 1412 aa14.55□□□□□ -0.08
SMCR8-201ENST00000406438 PDE4AP27815 886 aa14.55□□□□□ -0.08
SMCR8-201ENST00000406438 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
SMCR8-201ENST00000406438 HSP90AB4PQ58FF6 505 aa14.55□□□□□ -0.08
SMCR8-201ENST00000406438 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
SMCR8-201ENST00000406438 ZBED9Q6R2W3 1325 aa14.55□□□□□ -0.08
SMCR8-201ENST00000406438 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
SMCR8-201ENST00000406438 CCDC73Q6ZRK6 1079 aa14.54□□□□□ -0.08
SMCR8-201ENST00000406438 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
SMCR8-201ENST00000406438 PLIN1O60240 522 aa14.54□□□□□ -0.08
SMCR8-201ENST00000406438 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
SMCR8-201ENST00000406438 CUX1P39880 1505 aa14.54□□□□□ -0.08
SMCR8-201ENST00000406438 OFD1O75665 1012 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms