RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 IDI1Q13907 227 aa31.61■■■□□ 2.65
EPCAM-202ENST00000405271 CERKQ8TCT0 537 aa31.61■■■□□ 2.65
EPCAM-202ENST00000405271 NEXMIFQ5QGS0 1516 aa31.57■■■□□ 2.65
EPCAM-202ENST00000405271 MYOM2P54296 1465 aa31.57■■■□□ 2.64
EPCAM-202ENST00000405271 FBXO41Q8TF61 875 aa31.55■■■□□ 2.64
EPCAM-202ENST00000405271 PPP1R15AO75807 674 aaPredicted RBP31.54■■■□□ 2.64
EPCAM-202ENST00000405271 RGL3Q3MIN7 710 aa31.54■■■□□ 2.64
EPCAM-202ENST00000405271 CHGAP10645 457 aaKnown RBP31.53■■■□□ 2.64
EPCAM-202ENST00000405271 TRPM1Q7Z4N2 1603 aa31.52■■■□□ 2.64
EPCAM-202ENST00000405271 KIAA1210Q9ULL0 1709 aa31.52■■■□□ 2.64
EPCAM-202ENST00000405271 STAC3Q96MF2 364 aa31.51■■■□□ 2.63
EPCAM-202ENST00000405271 RPGRIP1LQ68CZ1 1315 aa31.5■■■□□ 2.63
EPCAM-202ENST00000405271 STAG3Q9UJ98 1225 aa31.5■■■□□ 2.63
EPCAM-202ENST00000405271 ZNF335Q9H4Z2 1342 aaPredicted RBP31.5■■■□□ 2.63
EPCAM-202ENST00000405271 DCAF11Q8TEB1 546 aa31.49■■■□□ 2.63
EPCAM-202ENST00000405271 ZNF326Q5BKZ1 582 aaKnown RBP31.47■■■□□ 2.63
EPCAM-202ENST00000405271 LTBP4Q8N2S1 1624 aa31.46■■■□□ 2.63
EPCAM-202ENST00000405271 MED14O60244 1454 aa31.46■■■□□ 2.63
EPCAM-202ENST00000405271 PRAG1Q86YV5 1406 aa31.46■■■□□ 2.63
EPCAM-202ENST00000405271 LTKP29376 864 aa31.45■■■□□ 2.63
EPCAM-202ENST00000405271 LAMC1P11047 1609 aa31.45■■■□□ 2.62
EPCAM-202ENST00000405271 NRXN1Q9ULB1 1477 aa31.44■■■□□ 2.62
EPCAM-202ENST00000405271 TXNDC2Q86VQ3 553 aa31.44■■■□□ 2.62
EPCAM-202ENST00000405271 NPHP4O75161 1426 aaPredicted RBP31.44■■■□□ 2.62
EPCAM-202ENST00000405271 POLR1AO95602 1720 aaPredicted RBP31.42■■■□□ 2.62
EPCAM-202ENST00000405271 ARHGAP23Q9P227 1491 aa31.42■■■□□ 2.62
EPCAM-202ENST00000405271 TMEM2Q9UHN6 1383 aa31.42■■■□□ 2.62
EPCAM-202ENST00000405271 ZFYVE9O95405 1425 aa31.42■■■□□ 2.62
EPCAM-202ENST00000405271 SLIT1O75093 1534 aa31.41■■■□□ 2.62
EPCAM-202ENST00000405271 RALGAPBQ86X10 1494 aa31.41■■■□□ 2.62
EPCAM-202ENST00000405271 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
EPCAM-202ENST00000405271 EID1Q9Y6B2 187 aa31.4■■■□□ 2.62
EPCAM-202ENST00000405271 SCAF11Q99590 1463 aaKnown RBP31.39■■■□□ 2.62
EPCAM-202ENST00000405271 RIMS2Q9UQ26 1411 aa31.38■■■□□ 2.61
EPCAM-202ENST00000405271 NBPF8Q3BBV2 869 aa31.35■■■□□ 2.61
EPCAM-202ENST00000405271 PIK3C2GO75747 1445 aa31.34■■■□□ 2.61
EPCAM-202ENST00000405271 IQGAP1P46940 1657 aa31.32■■■□□ 2.61
EPCAM-202ENST00000405271 VGFO15240 615 aaPredicted RBP31.32■■■□□ 2.6
EPCAM-202ENST00000405271 SETD1AO15047 1707 aaKnown RBP31.31■■■□□ 2.6
EPCAM-202ENST00000405271 SETBP1Q9Y6X0 1596 aa31.3■■■□□ 2.6
EPCAM-202ENST00000405271 NRXN3Q9Y4C0 1643 aa31.29■■■□□ 2.6
EPCAM-202ENST00000405271 ADGRF5Q8IZF2 1346 aa31.29■■■□□ 2.6
EPCAM-202ENST00000405271 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.29■■■□□ 2.6
EPCAM-202ENST00000405271 HDGFP51858 240 aaKnown RBP31.27■■■□□ 2.6
EPCAM-202ENST00000405271 IQSEC2Q5JU85 1478 aa31.25■■■□□ 2.59
EPCAM-202ENST00000405271 GPRASP1Q5JY77 1395 aa31.22■■■□□ 2.59
EPCAM-202ENST00000405271 ROCK2O75116 1388 aaKnown RBP31.21■■■□□ 2.59
EPCAM-202ENST00000405271 ALKQ9UM73 1620 aa31.21■■■□□ 2.59
EPCAM-202ENST00000405271 NUTM2DQ5VT03 806 aaPredicted RBP31.19■■■□□ 2.58
EPCAM-202ENST00000405271 CPS1P31327 1500 aa31.19■■■□□ 2.58
EPCAM-202ENST00000405271 DIP2AQ14689 1571 aa31.18■■■□□ 2.58
EPCAM-202ENST00000405271 SLC26A8Q96RN1 970 aa31.18■■■□□ 2.58
EPCAM-202ENST00000405271 PLEKHG1Q9ULL1 1385 aa31.17■■■□□ 2.58
EPCAM-202ENST00000405271 ADGRB1O14514 1584 aa31.17■■■□□ 2.58
EPCAM-202ENST00000405271 BCANQ96GW7 911 aa31.15■■■□□ 2.58
EPCAM-202ENST00000405271 SENP3Q9H4L4 574 aaPredicted RBP31.14■■■□□ 2.57
EPCAM-202ENST00000405271 C14orf93Q9H972 538 aaKnown RBP31.14■■■□□ 2.57
EPCAM-202ENST00000405271 ASXL1Q8IXJ9 1541 aa31.13■■■□□ 2.57
EPCAM-202ENST00000405271 UBAP1LF5GYI3 381 aa31.12■■■□□ 2.57
EPCAM-202ENST00000405271 KNDC1Q76NI1 1749 aa31.11■■■□□ 2.57
EPCAM-202ENST00000405271 CFAP70Q5T0N1 1121 aa31.11■■■□□ 2.57
EPCAM-202ENST00000405271 ARHGEF28Q8N1W1 1705 aaKnown RBP31.11■■■□□ 2.57
EPCAM-202ENST00000405271 CARD11Q9BXL7 1154 aa31.09■■■□□ 2.57
EPCAM-202ENST00000405271 NBPF1Q3BBV0 1214 aa31.08■■■□□ 2.57
EPCAM-202ENST00000405271 STRCP1A6NGW2 1772 aa31.07■■■□□ 2.56
EPCAM-202ENST00000405271 USP47Q96K76 1375 aa31.06■■■□□ 2.56
EPCAM-202ENST00000405271 ADAMTS13Q76LX8 1427 aa31.06■■■□□ 2.56
EPCAM-202ENST00000405271 LRRC7Q96NW7 1537 aa31.06■■■□□ 2.56
EPCAM-202ENST00000405271 KCNA6P17658 529 aa31.05■■■□□ 2.56
EPCAM-202ENST00000405271 EIF4G2P78344 907 aaKnown RBP eCLIP31.03■■■□□ 2.56
EPCAM-202ENST00000405271 TBX22Q9Y458 520 aa31.03■■■□□ 2.56
EPCAM-202ENST00000405271 TOM1O60784 492 aa31■■■□□ 2.55
EPCAM-202ENST00000405271 QRICH2Q9H0J4 1663 aa31■■■□□ 2.55
EPCAM-202ENST00000405271 EIF3AQ14152 1382 aaKnown RBP30.99■■■□□ 2.55
EPCAM-202ENST00000405271 CHD2O14647 1828 aaKnown RBP30.99■■■□□ 2.55
EPCAM-202ENST00000405271 YTHDC2Q9H6S0 1430 aaKnown RBP30.96■■■□□ 2.55
EPCAM-202ENST00000405271 HSPA5P11021 654 aaKnown RBP30.96■■■□□ 2.55
EPCAM-202ENST00000405271 DLC1Q96QB1 1528 aa30.96■■■□□ 2.55
EPCAM-202ENST00000405271 XRN1Q8IZH2 1706 aaKnown RBP30.95■■■□□ 2.55
EPCAM-202ENST00000405271 PROSER2Q86WR7 435 aaPredicted RBP30.93■■■□□ 2.54
EPCAM-202ENST00000405271 PIP4K2BP78356 416 aa30.93■■■□□ 2.54
EPCAM-202ENST00000405271 TMEM132EQ6IEE7 984 aa30.92■■■□□ 2.54
EPCAM-202ENST00000405271 METP08581 1390 aa30.91■■■□□ 2.54
EPCAM-202ENST00000405271 LRPPRCP42704 1394 aaKnown RBP30.91■■■□□ 2.54
EPCAM-202ENST00000405271 TMEM94Q12767 1356 aa30.91■■■□□ 2.54
EPCAM-202ENST00000405271 RBM33Q96EV2 1170 aaKnown RBP30.91■■■□□ 2.54
EPCAM-202ENST00000405271 PIK3R4Q99570 1358 aa30.9■■■□□ 2.54
EPCAM-202ENST00000405271 ZNF316A6NFI3 1004 aaPredicted RBP30.9■■■□□ 2.54
EPCAM-202ENST00000405271 TECPR2O15040 1411 aa30.89■■■□□ 2.54
EPCAM-202ENST00000405271 SCAF1Q9H7N4 1312 aaKnown RBP30.89■■■□□ 2.54
EPCAM-202ENST00000405271 NWD1Q149M9 1564 aa30.86■■■□□ 2.53
EPCAM-202ENST00000405271 NKTRP30414 1462 aaKnown RBP30.85■■■□□ 2.53
EPCAM-202ENST00000405271 ABCC11Q96J66 1382 aa30.85■■■□□ 2.53
EPCAM-202ENST00000405271 ST20-MTHFSA0A0A6YYL1 179 aa30.83■■■□□ 2.53
EPCAM-202ENST00000405271 TRAK1Q9UPV9 953 aa30.83■■■□□ 2.53
EPCAM-202ENST00000405271 HIRIP3Q9BW71 556 aaPredicted RBP30.82■■■□□ 2.52
EPCAM-202ENST00000405271 AMOTL2Q9Y2J4 779 aa30.82■■■□□ 2.52
EPCAM-202ENST00000405271 SBNO2Q9Y2G9 1366 aa30.82■■■□□ 2.52
EPCAM-202ENST00000405271 PTPRUQ92729 1446 aa30.81■■■□□ 2.52
EPCAM-202ENST00000405271 XIRP1Q702N8 1843 aaKnown RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms