RNA–Protein interactions for RNA: ENST00000404666.6

VSNL1-202, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene VSNL1, Length 992 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-202ENST00000404666 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
VSNL1-202ENST00000404666 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
VSNL1-202ENST00000404666 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
VSNL1-202ENST00000404666 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
VSNL1-202ENST00000404666 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
VSNL1-202ENST00000404666 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
VSNL1-202ENST00000404666 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
VSNL1-202ENST00000404666 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
VSNL1-202ENST00000404666 PPLO60437 1756 aa17.12■□□□□ 0.33
VSNL1-202ENST00000404666 NWD1Q149M9 1564 aa17.11■□□□□ 0.33
VSNL1-202ENST00000404666 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
VSNL1-202ENST00000404666 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
VSNL1-202ENST00000404666 CCDC144AA2RUR9 1427 aa17.11■□□□□ 0.33
VSNL1-202ENST00000404666 IFT172Q9UG01 1749 aa17.1■□□□□ 0.33
VSNL1-202ENST00000404666 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
VSNL1-202ENST00000404666 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
VSNL1-202ENST00000404666 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
VSNL1-202ENST00000404666 FOXD1Q16676 465 aa17.08■□□□□ 0.32
VSNL1-202ENST00000404666 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
VSNL1-202ENST00000404666 ANKRD30BQ9BXX2 1392 aa17.06■□□□□ 0.32
VSNL1-202ENST00000404666 RPGRIP1LQ68CZ1 1315 aa17.06■□□□□ 0.32
VSNL1-202ENST00000404666 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
VSNL1-202ENST00000404666 FBXO41Q8TF61 875 aa17.06■□□□□ 0.32
VSNL1-202ENST00000404666 PIK3R4Q99570 1358 aa17.05■□□□□ 0.32
VSNL1-202ENST00000404666 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
VSNL1-202ENST00000404666 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
VSNL1-202ENST00000404666 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
VSNL1-202ENST00000404666 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
VSNL1-202ENST00000404666 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
VSNL1-202ENST00000404666 KCNA6P17658 529 aa17.01■□□□□ 0.31
VSNL1-202ENST00000404666 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
VSNL1-202ENST00000404666 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
VSNL1-202ENST00000404666 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
VSNL1-202ENST00000404666 SLC26A8Q96RN1 970 aa17■□□□□ 0.31
VSNL1-202ENST00000404666 PRAG1Q86YV5 1406 aa16.98■□□□□ 0.31
VSNL1-202ENST00000404666 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
VSNL1-202ENST00000404666 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
VSNL1-202ENST00000404666 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
VSNL1-202ENST00000404666 ALKQ9UM73 1620 aa16.97■□□□□ 0.31
VSNL1-202ENST00000404666 NUTM2DQ5VT03 806 aaPredicted RBP16.97■□□□□ 0.31
VSNL1-202ENST00000404666 MYOM2P54296 1465 aa16.97■□□□□ 0.31
VSNL1-202ENST00000404666 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.3
VSNL1-202ENST00000404666 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
VSNL1-202ENST00000404666 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
VSNL1-202ENST00000404666 LAMC1P11047 1609 aa16.93■□□□□ 0.3
VSNL1-202ENST00000404666 BCANQ96GW7 911 aa16.93■□□□□ 0.3
VSNL1-202ENST00000404666 METP08581 1390 aa16.91■□□□□ 0.3
VSNL1-202ENST00000404666 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
VSNL1-202ENST00000404666 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
VSNL1-202ENST00000404666 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
VSNL1-202ENST00000404666 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
VSNL1-202ENST00000404666 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
VSNL1-202ENST00000404666 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
VSNL1-202ENST00000404666 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
VSNL1-202ENST00000404666 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
VSNL1-202ENST00000404666 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
VSNL1-202ENST00000404666 TECPR2O15040 1411 aa16.87■□□□□ 0.29
VSNL1-202ENST00000404666 TOM1O60784 492 aa16.86■□□□□ 0.29
VSNL1-202ENST00000404666 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
VSNL1-202ENST00000404666 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.85■□□□□ 0.29
VSNL1-202ENST00000404666 UBAP1LF5GYI3 381 aa16.85■□□□□ 0.29
VSNL1-202ENST00000404666 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
VSNL1-202ENST00000404666 DCCP43146 1447 aa16.84■□□□□ 0.29
VSNL1-202ENST00000404666 NALCNQ8IZF0 1738 aa16.83■□□□□ 0.28
VSNL1-202ENST00000404666 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
VSNL1-202ENST00000404666 MSH6P52701 1360 aa16.82■□□□□ 0.28
VSNL1-202ENST00000404666 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
VSNL1-202ENST00000404666 ADGRB1O14514 1584 aa16.81■□□□□ 0.28
VSNL1-202ENST00000404666 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
VSNL1-202ENST00000404666 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
VSNL1-202ENST00000404666 ABCC11Q96J66 1382 aa16.8■□□□□ 0.28
VSNL1-202ENST00000404666 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
VSNL1-202ENST00000404666 ROBO2Q9HCK4 1378 aa16.79■□□□□ 0.28
VSNL1-202ENST00000404666 C19orf44Q9H6X5 657 aa16.79■□□□□ 0.28
VSNL1-202ENST00000404666 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
VSNL1-202ENST00000404666 DLC1Q96QB1 1528 aa16.78■□□□□ 0.28
VSNL1-202ENST00000404666 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
VSNL1-202ENST00000404666 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
VSNL1-202ENST00000404666 SIRT1Q96EB6 747 aa16.76■□□□□ 0.27
VSNL1-202ENST00000404666 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
VSNL1-202ENST00000404666 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
VSNL1-202ENST00000404666 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
VSNL1-202ENST00000404666 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
VSNL1-202ENST00000404666 MST1RQ04912 1400 aa16.71■□□□□ 0.27
VSNL1-202ENST00000404666 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
VSNL1-202ENST00000404666 PIP4K2BP78356 416 aa16.71■□□□□ 0.27
VSNL1-202ENST00000404666 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
VSNL1-202ENST00000404666 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
VSNL1-202ENST00000404666 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
VSNL1-202ENST00000404666 KDM2AQ9Y2K7 1162 aa16.7■□□□□ 0.26
VSNL1-202ENST00000404666 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
VSNL1-202ENST00000404666 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
VSNL1-202ENST00000404666 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
VSNL1-202ENST00000404666 ATF3P18847 181 aa16.69■□□□□ 0.26
VSNL1-202ENST00000404666 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
VSNL1-202ENST00000404666 L3MBTL2Q969R5 705 aa16.69■□□□□ 0.26
VSNL1-202ENST00000404666 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
VSNL1-202ENST00000404666 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
VSNL1-202ENST00000404666 HSPA1LP34931 641 aa16.67■□□□□ 0.26
VSNL1-202ENST00000404666 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms