RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CD46P15529 392 aa10.37□□□□□ -0.75
HMGB3P19-201ENST00000403971 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
HMGB3P19-201ENST00000403971 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
HMGB3P19-201ENST00000403971 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
HMGB3P19-201ENST00000403971 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
HMGB3P19-201ENST00000403971 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
HMGB3P19-201ENST00000403971 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
HMGB3P19-201ENST00000403971 HRO43593 1189 aa10.33□□□□□ -0.76
HMGB3P19-201ENST00000403971 SAMD7Q7Z3H4 446 aa10.33□□□□□ -0.76
HMGB3P19-201ENST00000403971 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
HMGB3P19-201ENST00000403971 SH3D19Q5HYK7 790 aa10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 MRPL50Q8N5N7 158 aaKnown RBP10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 POLR3EQ9NVU0 708 aa10.32□□□□□ -0.76
HMGB3P19-201ENST00000403971 SLC10A3P09131 477 aa10.31□□□□□ -0.76
HMGB3P19-201ENST00000403971 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
HMGB3P19-201ENST00000403971 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
HMGB3P19-201ENST00000403971 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
HMGB3P19-201ENST00000403971 GOPCQ9HD26 462 aa10.31□□□□□ -0.76
HMGB3P19-201ENST00000403971 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
HMGB3P19-201ENST00000403971 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
HMGB3P19-201ENST00000403971 TIMELESSQ9UNS1 1208 aa10.3□□□□□ -0.76
HMGB3P19-201ENST00000403971 RNF40O75150 1001 aa10.29□□□□□ -0.76
HMGB3P19-201ENST00000403971 HDGFP51858 240 aaKnown RBP10.29□□□□□ -0.76
HMGB3P19-201ENST00000403971 SKIV2LQ15477 1246 aaKnown RBP10.29□□□□□ -0.76
HMGB3P19-201ENST00000403971 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
HMGB3P19-201ENST00000403971 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
HMGB3P19-201ENST00000403971 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.77
HMGB3P19-201ENST00000403971 GCGRP47871 477 aa10.26□□□□□ -0.77
HMGB3P19-201ENST00000403971 MOXD2PA6NHM9 499 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 NDUFV2P19404 249 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 CLK2P49760 499 aaKnown RBP10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 POTEGQ6S5H5 508 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 LIMD1Q9UGP4 676 aa10.25□□□□□ -0.77
HMGB3P19-201ENST00000403971 KDM4AO75164 1064 aa10.24□□□□□ -0.77
HMGB3P19-201ENST00000403971 LRCH3Q96II8 777 aa10.24□□□□□ -0.77
HMGB3P19-201ENST00000403971 POTEMA6NI47 508 aa10.23□□□□□ -0.77
HMGB3P19-201ENST00000403971 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
HMGB3P19-201ENST00000403971 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
HMGB3P19-201ENST00000403971 RIC3Q7Z5B4 369 aa10.23□□□□□ -0.77
HMGB3P19-201ENST00000403971 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
HMGB3P19-201ENST00000403971 GOLGA8CPA6NN73 597 aa10.22□□□□□ -0.77
HMGB3P19-201ENST00000403971 CFHP08603 1231 aa10.22□□□□□ -0.77
HMGB3P19-201ENST00000403971 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
HMGB3P19-201ENST00000403971 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
HMGB3P19-201ENST00000403971 HLA-CQ95604 372 aa10.22□□□□□ -0.77
HMGB3P19-201ENST00000403971 BCAMP50895 628 aa10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 ANKK1Q8NFD2 765 aa10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGB3P19-201ENST00000403971 SPTLC1O15269 473 aa10.2□□□□□ -0.78
HMGB3P19-201ENST00000403971 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
HMGB3P19-201ENST00000403971 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
HMGB3P19-201ENST00000403971 HOXA2O43364 376 aa10.19□□□□□ -0.78
HMGB3P19-201ENST00000403971 FUT2Q10981 343 aa10.19□□□□□ -0.78
HMGB3P19-201ENST00000403971 WNT2BQ93097 391 aa10.19□□□□□ -0.78
HMGB3P19-201ENST00000403971 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
HMGB3P19-201ENST00000403971 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
HMGB3P19-201ENST00000403971 HPS5Q9UPZ3 1129 aa10.18□□□□□ -0.78
HMGB3P19-201ENST00000403971 USP46P62068 366 aa10.17□□□□□ -0.78
HMGB3P19-201ENST00000403971 QPCTQ16769 361 aa10.17□□□□□ -0.78
HMGB3P19-201ENST00000403971 PCDHGC3Q9UN70 934 aa10.16□□□□□ -0.78
HMGB3P19-201ENST00000403971 FDX1P10109 184 aa10.15□□□□□ -0.78
HMGB3P19-201ENST00000403971 CABLES1Q8TDN4 633 aa10.15□□□□□ -0.78
HMGB3P19-201ENST00000403971 PPP4CP60510 307 aa10.14□□□□□ -0.79
HMGB3P19-201ENST00000403971 PUS10Q3MIT2 529 aaKnown RBP10.14□□□□□ -0.79
HMGB3P19-201ENST00000403971 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
HMGB3P19-201ENST00000403971 RFC5P40937 340 aa10.13□□□□□ -0.79
HMGB3P19-201ENST00000403971 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
HMGB3P19-201ENST00000403971 KCTD12Q96CX2 325 aaKnown RBP10.13□□□□□ -0.79
HMGB3P19-201ENST00000403971 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
HMGB3P19-201ENST00000403971 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 GJA5P36382 358 aa10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 APLP1P51693 650 aa10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 RTL5Q5HYW3 569 aaPredicted RBP10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
HMGB3P19-201ENST00000403971 LILRB3O75022 631 aa10.11□□□□□ -0.79
HMGB3P19-201ENST00000403971 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
HMGB3P19-201ENST00000403971 THSD4Q6ZMP0 1018 aa10.11□□□□□ -0.79
HMGB3P19-201ENST00000403971 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 HRCP23327 699 aa10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 NECTIN2Q92692 538 aa10.1□□□□□ -0.79
HMGB3P19-201ENST00000403971 GRIPAP1Q4V328 841 aa10.09□□□□□ -0.79
HMGB3P19-201ENST00000403971 MORN1Q5T089 497 aa10.09□□□□□ -0.79
HMGB3P19-201ENST00000403971 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
HMGB3P19-201ENST00000403971 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
HMGB3P19-201ENST00000403971 ZBTB3Q9H5J0 574 aa10.08□□□□□ -0.8
HMGB3P19-201ENST00000403971 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
HMGB3P19-201ENST00000403971 PRPF38BQ5VTL8 546 aaKnown RBP10.07□□□□□ -0.8
HMGB3P19-201ENST00000403971 C6orf229H3BNL8 230 aa10.06□□□□□ -0.8
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