RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KDM2BQ8NHM5 1336 aa15.61■□□□□ 0.09
RBM39-206ENST00000403542 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
RBM39-206ENST00000403542 SLFN5Q08AF3 891 aa15.61■□□□□ 0.09
RBM39-206ENST00000403542 ZMYM4Q5VZL5 1548 aa15.61■□□□□ 0.09
RBM39-206ENST00000403542 CENPQQ7L2Z9 268 aaPredicted RBP15.61■□□□□ 0.09
RBM39-206ENST00000403542 BCL2L13Q9BXK5 485 aa15.6■□□□□ 0.09
RBM39-206ENST00000403542 PANK1Q8TE04 598 aa15.59■□□□□ 0.09
RBM39-206ENST00000403542 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
RBM39-206ENST00000403542 C8orf34Q49A92 452 aa15.59■□□□□ 0.09
RBM39-206ENST00000403542 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
RBM39-206ENST00000403542 NFKBIBQ15653 356 aa15.58■□□□□ 0.09
RBM39-206ENST00000403542 COG6Q9Y2V7 657 aa15.58■□□□□ 0.09
RBM39-206ENST00000403542 PPM1GO15355 546 aaPredicted RBP15.58■□□□□ 0.08
RBM39-206ENST00000403542 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
RBM39-206ENST00000403542 ADGRF5Q8IZF2 1346 aa15.58■□□□□ 0.08
RBM39-206ENST00000403542 IGHDP01880 384 aa15.58■□□□□ 0.08
RBM39-206ENST00000403542 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
RBM39-206ENST00000403542 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
RBM39-206ENST00000403542 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
RBM39-206ENST00000403542 ZNF521Q96K83 1311 aa15.57■□□□□ 0.08
RBM39-206ENST00000403542 CDCA8Q53HL2 280 aa15.57■□□□□ 0.08
RBM39-206ENST00000403542 BRPF3Q9ULD4 1205 aa15.56■□□□□ 0.08
RBM39-206ENST00000403542 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
RBM39-206ENST00000403542 UNC13BO14795 1591 aa15.55■□□□□ 0.08
RBM39-206ENST00000403542 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
RBM39-206ENST00000403542 TNNQ9UQP3 1299 aa15.55■□□□□ 0.08
RBM39-206ENST00000403542 CLUAP1Q96AJ1 413 aa15.54■□□□□ 0.08
RBM39-206ENST00000403542 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
RBM39-206ENST00000403542 FRAT2O75474 233 aaPredicted RBP15.53■□□□□ 0.08
RBM39-206ENST00000403542 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
RBM39-206ENST00000403542 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
RBM39-206ENST00000403542 SEC24BO95487 1268 aa15.52■□□□□ 0.08
RBM39-206ENST00000403542 SLC12A5Q9H2X9 1139 aa15.52■□□□□ 0.08
RBM39-206ENST00000403542 MAST1Q9Y2H9 1570 aa15.52■□□□□ 0.08
RBM39-206ENST00000403542 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.07
RBM39-206ENST00000403542 SCAF11Q99590 1463 aaKnown RBP15.51■□□□□ 0.07
RBM39-206ENST00000403542 UGGT1Q9NYU2 1555 aa15.51■□□□□ 0.07
RBM39-206ENST00000403542 EIF2AK4Q9P2K8 1649 aaKnown RBP15.51■□□□□ 0.07
RBM39-206ENST00000403542 PLCH2O75038 1416 aa15.51■□□□□ 0.07
RBM39-206ENST00000403542 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
RBM39-206ENST00000403542 ATP10AO60312 1499 aa15.5■□□□□ 0.07
RBM39-206ENST00000403542 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
RBM39-206ENST00000403542 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
RBM39-206ENST00000403542 CENPJQ9HC77 1338 aaPredicted RBP15.49■□□□□ 0.07
RBM39-206ENST00000403542 E9PSI1 815 aa15.49■□□□□ 0.07
RBM39-206ENST00000403542 GSE1Q14687 1217 aa15.49■□□□□ 0.07
RBM39-206ENST00000403542 MORC1Q86VD1 984 aa15.49■□□□□ 0.07
RBM39-206ENST00000403542 SLKQ9H2G2 1235 aaPredicted RBP15.49■□□□□ 0.07
RBM39-206ENST00000403542 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
RBM39-206ENST00000403542 WWC1Q8IX03 1113 aa15.49■□□□□ 0.07
RBM39-206ENST00000403542 ARXQ96QS3 562 aa15.48■□□□□ 0.07
RBM39-206ENST00000403542 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
RBM39-206ENST00000403542 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
RBM39-206ENST00000403542 MADDQ8WXG6 1647 aa15.47■□□□□ 0.07
RBM39-206ENST00000403542 CHD1O14646 1710 aa15.47■□□□□ 0.07
RBM39-206ENST00000403542 GGT6Q6P531 493 aa15.46■□□□□ 0.07
RBM39-206ENST00000403542 TRMT2AQ8IZ69 625 aaKnown RBP15.46■□□□□ 0.07
RBM39-206ENST00000403542 EIF3AQ14152 1382 aaKnown RBP15.46■□□□□ 0.07
RBM39-206ENST00000403542 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
RBM39-206ENST00000403542 PLXNC1O60486 1568 aa15.46■□□□□ 0.06
RBM39-206ENST00000403542 RLBP1P12271 317 aa15.46■□□□□ 0.06
RBM39-206ENST00000403542 TCP11L2Q8N4U5 519 aa15.45■□□□□ 0.06
RBM39-206ENST00000403542 KANK1Q14678 1352 aa15.45■□□□□ 0.06
RBM39-206ENST00000403542 LAMC1P11047 1609 aa15.44■□□□□ 0.06
RBM39-206ENST00000403542 INSRP06213 1382 aa15.44■□□□□ 0.06
RBM39-206ENST00000403542 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
RBM39-206ENST00000403542 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
RBM39-206ENST00000403542 MTHFSP49914 203 aa15.43■□□□□ 0.06
RBM39-206ENST00000403542 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
RBM39-206ENST00000403542 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
RBM39-206ENST00000403542 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
RBM39-206ENST00000403542 ERVK-7P63135 1459 aa15.41■□□□□ 0.06
RBM39-206ENST00000403542 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
RBM39-206ENST00000403542 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.068e-22■□□□□ 9.7
RBM39-206ENST00000403542 ABCC1P33527 1531 aa15.41■□□□□ 0.06
RBM39-206ENST00000403542 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
RBM39-206ENST00000403542 SYNMO15061 1565 aa15.4■□□□□ 0.06
RBM39-206ENST00000403542 CFAP65Q6ZU64 1925 aaKnown RBP15.4■□□□□ 0.06
RBM39-206ENST00000403542 IQGAP1P46940 1657 aa15.4■□□□□ 0.06
RBM39-206ENST00000403542 RARSP54136 660 aaKnown RBP15.39■□□□□ 0.05
RBM39-206ENST00000403542 STK26Q9P289 416 aa15.39■□□□□ 0.05
RBM39-206ENST00000403542 TRPM2O94759 1503 aa15.39■□□□□ 0.05
RBM39-206ENST00000403542 USP19O94966 1318 aa15.39■□□□□ 0.05
RBM39-206ENST00000403542 CGNL1Q0VF96 1302 aa15.39■□□□□ 0.05
RBM39-206ENST00000403542 U2SURPO15042 1029 aaKnown RBP15.38■□□□□ 0.05
RBM39-206ENST00000403542 NOS1P29475 1434 aa15.38■□□□□ 0.05
RBM39-206ENST00000403542 PTPRTO14522 1441 aa15.38■□□□□ 0.05
RBM39-206ENST00000403542 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
RBM39-206ENST00000403542 ZCCHC11Q5TAX3 1644 aaKnown RBP15.37■□□□□ 0.05
RBM39-206ENST00000403542 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
RBM39-206ENST00000403542 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
RBM39-206ENST00000403542 POGKQ9P215 609 aa15.37■□□□□ 0.05
RBM39-206ENST00000403542 MYOM1P52179 1685 aa15.36■□□□□ 0.05
RBM39-206ENST00000403542 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
RBM39-206ENST00000403542 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
RBM39-206ENST00000403542 FANCAO15360 1455 aa15.35■□□□□ 0.05
RBM39-206ENST00000403542 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
RBM39-206ENST00000403542 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
RBM39-206ENST00000403542 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
RBM39-206ENST00000403542 NPC1L1Q9UHC9 1359 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms