RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
PTCHD3P3-201ENST00000403073 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
PTCHD3P3-201ENST00000403073 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
PTCHD3P3-201ENST00000403073 PPP1R15AO75807 674 aaPredicted RBP25.13■■□□□ 1.61
PTCHD3P3-201ENST00000403073 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.13■■□□□ 1.61
PTCHD3P3-201ENST00000403073 NEURL4Q96JN8 1562 aa25.13■■□□□ 1.61
PTCHD3P3-201ENST00000403073 MED14O60244 1454 aa25.11■■□□□ 1.61
PTCHD3P3-201ENST00000403073 MYO5BQ9ULV0 1848 aa25.1■■□□□ 1.61
PTCHD3P3-201ENST00000403073 BCANQ96GW7 911 aa25.1■■□□□ 1.61
PTCHD3P3-201ENST00000403073 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
PTCHD3P3-201ENST00000403073 RPGRIP1LQ68CZ1 1315 aa25.08■■□□□ 1.6
PTCHD3P3-201ENST00000403073 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
PTCHD3P3-201ENST00000403073 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
PTCHD3P3-201ENST00000403073 KIF1BO60333 1816 aa25.06■■□□□ 1.6
PTCHD3P3-201ENST00000403073 SLC26A8Q96RN1 970 aa25.05■■□□□ 1.6
PTCHD3P3-201ENST00000403073 PLEKHG1Q9ULL1 1385 aa25.05■■□□□ 1.6
PTCHD3P3-201ENST00000403073 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
PTCHD3P3-201ENST00000403073 VGFO15240 615 aaPredicted RBP25.03■■□□□ 1.6
PTCHD3P3-201ENST00000403073 NEUROD1Q13562 356 aa25.01■■□□□ 1.59
PTCHD3P3-201ENST00000403073 IQGAP1P46940 1657 aa25.01■■□□□ 1.59
PTCHD3P3-201ENST00000403073 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
PTCHD3P3-201ENST00000403073 ADGRF5Q8IZF2 1346 aa24.97■■□□□ 1.59
PTCHD3P3-201ENST00000403073 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
PTCHD3P3-201ENST00000403073 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
PTCHD3P3-201ENST00000403073 TBX22Q9Y458 520 aa24.95■■□□□ 1.58
PTCHD3P3-201ENST00000403073 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.58
PTCHD3P3-201ENST00000403073 PPLO60437 1756 aa24.9■■□□□ 1.58
PTCHD3P3-201ENST00000403073 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
PTCHD3P3-201ENST00000403073 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
PTCHD3P3-201ENST00000403073 KCNA6P17658 529 aa24.87■■□□□ 1.57
PTCHD3P3-201ENST00000403073 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
PTCHD3P3-201ENST00000403073 LTBP4Q8N2S1 1624 aa24.86■■□□□ 1.57
PTCHD3P3-201ENST00000403073 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
PTCHD3P3-201ENST00000403073 METP08581 1390 aa24.85■■□□□ 1.57
PTCHD3P3-201ENST00000403073 MYOM2P54296 1465 aa24.84■■□□□ 1.57
PTCHD3P3-201ENST00000403073 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
PTCHD3P3-201ENST00000403073 STAC3Q96MF2 364 aa24.84■■□□□ 1.57
PTCHD3P3-201ENST00000403073 CERKQ8TCT0 537 aa24.83■■□□□ 1.57
PTCHD3P3-201ENST00000403073 PIK3C2GO75747 1445 aa24.83■■□□□ 1.57
PTCHD3P3-201ENST00000403073 CFAP70Q5T0N1 1121 aa24.82■■□□□ 1.56
PTCHD3P3-201ENST00000403073 NRXN1Q9ULB1 1477 aa24.82■■□□□ 1.56
PTCHD3P3-201ENST00000403073 DIP2AQ14689 1571 aa24.81■■□□□ 1.56
PTCHD3P3-201ENST00000403073 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
PTCHD3P3-201ENST00000403073 AMOTL2Q9Y2J4 779 aa24.81■■□□□ 1.56
PTCHD3P3-201ENST00000403073 ALKQ9UM73 1620 aa24.81■■□□□ 1.56
PTCHD3P3-201ENST00000403073 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
PTCHD3P3-201ENST00000403073 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
PTCHD3P3-201ENST00000403073 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
PTCHD3P3-201ENST00000403073 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
PTCHD3P3-201ENST00000403073 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
PTCHD3P3-201ENST00000403073 PROSER2Q86WR7 435 aaPredicted RBP24.77■■□□□ 1.56
PTCHD3P3-201ENST00000403073 TONSLQ96HA7 1378 aa24.77■■□□□ 1.56
PTCHD3P3-201ENST00000403073 CPS1P31327 1500 aa24.76■■□□□ 1.55
PTCHD3P3-201ENST00000403073 STRCP1A6NGW2 1772 aa24.76■■□□□ 1.55
PTCHD3P3-201ENST00000403073 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
PTCHD3P3-201ENST00000403073 STK26Q9P289 416 aa24.73■■□□□ 1.55
PTCHD3P3-201ENST00000403073 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
PTCHD3P3-201ENST00000403073 PRAG1Q86YV5 1406 aa24.7■■□□□ 1.55
PTCHD3P3-201ENST00000403073 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P3-201ENST00000403073 TMEM94Q12767 1356 aa24.69■■□□□ 1.54
PTCHD3P3-201ENST00000403073 CHD2O14647 1828 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P3-201ENST00000403073 NKTRP30414 1462 aaKnown RBP24.69■■□□□ 1.54
PTCHD3P3-201ENST00000403073 ASXL1Q8IXJ9 1541 aa24.67■■□□□ 1.54
PTCHD3P3-201ENST00000403073 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
PTCHD3P3-201ENST00000403073 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
PTCHD3P3-201ENST00000403073 NBPF1Q3BBV0 1214 aa24.66■■□□□ 1.54
PTCHD3P3-201ENST00000403073 YTHDC2Q9H6S0 1430 aaKnown RBP24.65■■□□□ 1.54
PTCHD3P3-201ENST00000403073 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
PTCHD3P3-201ENST00000403073 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
PTCHD3P3-201ENST00000403073 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
PTCHD3P3-201ENST00000403073 ABCC11Q96J66 1382 aa24.63■■□□□ 1.53
PTCHD3P3-201ENST00000403073 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
PTCHD3P3-201ENST00000403073 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
PTCHD3P3-201ENST00000403073 LAMC1P11047 1609 aa24.61■■□□□ 1.53
PTCHD3P3-201ENST00000403073 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
PTCHD3P3-201ENST00000403073 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
PTCHD3P3-201ENST00000403073 ADGRB1O14514 1584 aa24.61■■□□□ 1.53
PTCHD3P3-201ENST00000403073 PTCH1Q13635 1447 aa24.59■■□□□ 1.53
PTCHD3P3-201ENST00000403073 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.53
PTCHD3P3-201ENST00000403073 TECPR2O15040 1411 aa24.58■■□□□ 1.53
PTCHD3P3-201ENST00000403073 SIRT1Q96EB6 747 aa24.57■■□□□ 1.52
PTCHD3P3-201ENST00000403073 NCOA3Q9Y6Q9 1424 aa24.57■■□□□ 1.52
PTCHD3P3-201ENST00000403073 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
PTCHD3P3-201ENST00000403073 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
PTCHD3P3-201ENST00000403073 C19orf44Q9H6X5 657 aa24.55■■□□□ 1.52
PTCHD3P3-201ENST00000403073 MSH6P52701 1360 aa24.54■■□□□ 1.52
PTCHD3P3-201ENST00000403073 TOM1O60784 492 aa24.54■■□□□ 1.52
PTCHD3P3-201ENST00000403073 SAFB2Q14151 953 aaKnown RBP eCLIP24.53■■□□□ 1.52
PTCHD3P3-201ENST00000403073 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
PTCHD3P3-201ENST00000403073 POGKQ9P215 609 aa24.53■■□□□ 1.52
PTCHD3P3-201ENST00000403073 XIRP1Q702N8 1843 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P3-201ENST00000403073 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
PTCHD3P3-201ENST00000403073 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
PTCHD3P3-201ENST00000403073 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
PTCHD3P3-201ENST00000403073 ATF3P18847 181 aa24.5■■□□□ 1.51
PTCHD3P3-201ENST00000403073 PIP4K2BP78356 416 aa24.49■■□□□ 1.51
PTCHD3P3-201ENST00000403073 TRPM1Q7Z4N2 1603 aa24.49■■□□□ 1.51
PTCHD3P3-201ENST00000403073 DLC1Q96QB1 1528 aa24.48■■□□□ 1.51
PTCHD3P3-201ENST00000403073 ADGRL3Q9HAR2 1447 aa24.48■■□□□ 1.51
PTCHD3P3-201ENST00000403073 CADPS2Q86UW7 1296 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms