RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
NDEL1-203ENST00000402554 ANKLE2Q86XL3 938 aa18.69■□□□□ 0.58
NDEL1-203ENST00000402554 TRPM2O94759 1503 aa18.69■□□□□ 0.58
NDEL1-203ENST00000402554 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
NDEL1-203ENST00000402554 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
NDEL1-203ENST00000402554 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
NDEL1-203ENST00000402554 LTKP29376 864 aa18.67■□□□□ 0.58
NDEL1-203ENST00000402554 MED14O60244 1454 aa18.66■□□□□ 0.58
NDEL1-203ENST00000402554 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
NDEL1-203ENST00000402554 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
NDEL1-203ENST00000402554 ZNF335Q9H4Z2 1342 aaPredicted RBP18.64■□□□□ 0.57
NDEL1-203ENST00000402554 KIF1BO60333 1816 aa18.63■□□□□ 0.57
NDEL1-203ENST00000402554 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
NDEL1-203ENST00000402554 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
NDEL1-203ENST00000402554 ZFYVE9O95405 1425 aa18.62■□□□□ 0.57
NDEL1-203ENST00000402554 RIMS2Q9UQ26 1411 aa18.62■□□□□ 0.57
NDEL1-203ENST00000402554 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
NDEL1-203ENST00000402554 EID1Q9Y6B2 187 aa18.6■□□□□ 0.57
NDEL1-203ENST00000402554 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
NDEL1-203ENST00000402554 ZNF326Q5BKZ1 582 aaKnown RBP18.55■□□□□ 0.56
NDEL1-203ENST00000402554 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
NDEL1-203ENST00000402554 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
NDEL1-203ENST00000402554 CCDC144AA2RUR9 1427 aa18.53■□□□□ 0.56
NDEL1-203ENST00000402554 BCANQ96GW7 911 aa18.53■□□□□ 0.56
NDEL1-203ENST00000402554 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
NDEL1-203ENST00000402554 PLEKHG1Q9ULL1 1385 aa18.52■□□□□ 0.56
NDEL1-203ENST00000402554 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
NDEL1-203ENST00000402554 PPLO60437 1756 aa18.5■□□□□ 0.55
NDEL1-203ENST00000402554 MIER1Q8N108 512 aa18.48■□□□□ 0.55
NDEL1-203ENST00000402554 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
NDEL1-203ENST00000402554 CPS1P31327 1500 aa18.48■□□□□ 0.55
NDEL1-203ENST00000402554 ADAMTS13Q76LX8 1427 aa18.47■□□□□ 0.55
NDEL1-203ENST00000402554 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
NDEL1-203ENST00000402554 HDGFP51858 240 aaKnown RBP18.47■□□□□ 0.55
NDEL1-203ENST00000402554 NBPF8Q3BBV2 869 aa18.47■□□□□ 0.55
NDEL1-203ENST00000402554 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
NDEL1-203ENST00000402554 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
NDEL1-203ENST00000402554 RGL3Q3MIN7 710 aa18.46■□□□□ 0.54
NDEL1-203ENST00000402554 ILDR1Q86SU0 546 aaPredicted RBP18.46■□□□□ 0.54
NDEL1-203ENST00000402554 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
NDEL1-203ENST00000402554 NWD1Q149M9 1564 aa18.44■□□□□ 0.54
NDEL1-203ENST00000402554 CHD2O14647 1828 aaKnown RBP18.44■□□□□ 0.54
NDEL1-203ENST00000402554 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
NDEL1-203ENST00000402554 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
NDEL1-203ENST00000402554 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
NDEL1-203ENST00000402554 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
NDEL1-203ENST00000402554 HSPA5P11021 654 aaKnown RBP18.41■□□□□ 0.54
NDEL1-203ENST00000402554 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
NDEL1-203ENST00000402554 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
NDEL1-203ENST00000402554 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
NDEL1-203ENST00000402554 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.54
NDEL1-203ENST00000402554 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
NDEL1-203ENST00000402554 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
NDEL1-203ENST00000402554 TBX22Q9Y458 520 aa18.38■□□□□ 0.53
NDEL1-203ENST00000402554 RPGRIP1LQ68CZ1 1315 aa18.37■□□□□ 0.53
NDEL1-203ENST00000402554 ADGRF5Q8IZF2 1346 aa18.37■□□□□ 0.53
NDEL1-203ENST00000402554 KCNA6P17658 529 aa18.37■□□□□ 0.53
NDEL1-203ENST00000402554 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
NDEL1-203ENST00000402554 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
NDEL1-203ENST00000402554 METP08581 1390 aa18.36■□□□□ 0.53
NDEL1-203ENST00000402554 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
NDEL1-203ENST00000402554 XRN1Q8IZH2 1706 aaKnown RBP18.36■□□□□ 0.53
NDEL1-203ENST00000402554 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
NDEL1-203ENST00000402554 KDM2AQ9Y2K7 1162 aa18.35■□□□□ 0.53
NDEL1-203ENST00000402554 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
NDEL1-203ENST00000402554 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
NDEL1-203ENST00000402554 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.53
NDEL1-203ENST00000402554 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.52
NDEL1-203ENST00000402554 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
NDEL1-203ENST00000402554 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
NDEL1-203ENST00000402554 AMOTL2Q9Y2J4 779 aa18.31■□□□□ 0.52
NDEL1-203ENST00000402554 MYOM2P54296 1465 aa18.3■□□□□ 0.52
NDEL1-203ENST00000402554 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
NDEL1-203ENST00000402554 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
NDEL1-203ENST00000402554 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
NDEL1-203ENST00000402554 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
NDEL1-203ENST00000402554 USP47Q96K76 1375 aa18.27■□□□□ 0.52
NDEL1-203ENST00000402554 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NDEL1-203ENST00000402554 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
NDEL1-203ENST00000402554 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
NDEL1-203ENST00000402554 LAMC1P11047 1609 aa18.25■□□□□ 0.51
NDEL1-203ENST00000402554 NALCNQ8IZF0 1738 aa18.24■□□□□ 0.51
NDEL1-203ENST00000402554 TRPM1Q7Z4N2 1603 aa18.24■□□□□ 0.51
NDEL1-203ENST00000402554 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
NDEL1-203ENST00000402554 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.23■□□□□ 0.51
NDEL1-203ENST00000402554 TOM1O60784 492 aa18.23■□□□□ 0.51
NDEL1-203ENST00000402554 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
NDEL1-203ENST00000402554 ROCK2O75116 1388 aaKnown RBP18.23■□□□□ 0.51
NDEL1-203ENST00000402554 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
NDEL1-203ENST00000402554 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
NDEL1-203ENST00000402554 C11orf95C9JLR9 678 aaPredicted RBP18.22■□□□□ 0.51
NDEL1-203ENST00000402554 ROBO2Q9HCK4 1378 aa18.22■□□□□ 0.51
NDEL1-203ENST00000402554 STK26Q9P289 416 aa18.21■□□□□ 0.51
NDEL1-203ENST00000402554 MSH6P52701 1360 aa18.21■□□□□ 0.51
NDEL1-203ENST00000402554 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
NDEL1-203ENST00000402554 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
NDEL1-203ENST00000402554 PTCH1Q13635 1447 aa18.2■□□□□ 0.5
NDEL1-203ENST00000402554 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
NDEL1-203ENST00000402554 ANP32CO43423 234 aa18.19■□□□□ 0.5
NDEL1-203ENST00000402554 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms