RNA–Protein interactions for RNA: ENST00000400824.8

AFDN-208, Transcript of afadin, adherens junction formation factor, human

TSL 5

Gene AFDN, Length 875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-208	ENST00000400824	RBM33	Q96EV2	1170 aa	Known RBP	40.9	■■■■■ 4.14
AFDN-208	ENST00000400824	ANKRD50	Q9ULJ7	1429 aa		40.88	■■■■■ 4.13
AFDN-208	ENST00000400824	MYO5B	Q9ULV0	1848 aa		40.86	■■■■■ 4.13
AFDN-208	ENST00000400824	FAM50A	Q14320	339 aa	Known RBP	40.85	■■■■■ 4.13
AFDN-208	ENST00000400824	ZFYVE9	O95405	1425 aa		40.84	■■■■■ 4.13
AFDN-208	ENST00000400824	BCAN	Q96GW7	911 aa		40.82	■■■■■ 4.13
AFDN-208	ENST00000400824	GCC2	Q8IWJ2	1684 aa		40.8	■■■■■ 4.12
AFDN-208	ENST00000400824	CHD2	O14647	1828 aa	Known RBP	40.79	■■■■■ 4.12
AFDN-208	ENST00000400824	PLEKHG1	Q9ULL1	1385 aa		40.79	■■■■■ 4.12
AFDN-208	ENST00000400824	MSH6	P52701	1360 aa		40.77	■■■■■ 4.12
AFDN-208	ENST00000400824	TMEM131L	A2VDJ0	1609 aa		40.77	■■■■■ 4.12
AFDN-208	ENST00000400824	RIMS2	Q9UQ26	1411 aa		40.76	■■■■■ 4.11
AFDN-208	ENST00000400824	HDGF	P51858	240 aa	Known RBP	40.72	■■■■■ 4.11
AFDN-208	ENST00000400824	UNC13B	O14795	1591 aa		40.71	■■■■■ 4.11
AFDN-208	ENST00000400824	SLAIN2	Q9P270	581 aa		40.71	■■■■■ 4.11
AFDN-208	ENST00000400824	POTEA	Q6S8J7	498 aa		40.7	■■■■■ 4.11
AFDN-208	ENST00000400824	PPP1R15A	O75807	674 aa	Predicted RBP	40.69	■■■■■ 4.1
AFDN-208	ENST00000400824	TBX22	Q9Y458	520 aa		40.66	■■■■■ 4.1
AFDN-208	ENST00000400824	PHLPP1	O60346	1717 aa		40.66	■■■■■ 4.1
AFDN-208	ENST00000400824		E9PCH4	1651 aa		40.64	■■■■■ 4.1
AFDN-208	ENST00000400824	NCOA3	Q9Y6Q9	1424 aa		40.61	■■■■■ 4.09
AFDN-208	ENST00000400824	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	40.61	■■■■■ 4.09
AFDN-208	ENST00000400824	CHGA	P10645	457 aa	Known RBP	40.59	■■■■■ 4.09
AFDN-208	ENST00000400824	ADAMTS13	Q76LX8	1427 aa		40.59	■■■■■ 4.09
AFDN-208	ENST00000400824	JCAD	Q9P266	1359 aa		40.57	■■■■■ 4.08
AFDN-208	ENST00000400824	ROCK1	Q13464	1354 aa		40.56	■■■■■ 4.08
AFDN-208	ENST00000400824	IQGAP3	Q86VI3	1631 aa		40.56	■■■■■ 4.08
AFDN-208	ENST00000400824	DIP2A	Q14689	1571 aa		40.54	■■■■■ 4.08
AFDN-208	ENST00000400824	COL16A1	Q07092	1604 aa	Predicted RBP	40.53	■■■■■ 4.08
AFDN-208	ENST00000400824	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.53	■■■■■ 4.08
AFDN-208	ENST00000400824	PIK3R4	Q99570	1358 aa		40.51	■■■■■ 4.08
AFDN-208	ENST00000400824	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.48	■■■■■ 4.07
AFDN-208	ENST00000400824	C14orf37	Q86TY3	774 aa		40.46	■■■■■ 4.07
AFDN-208	ENST00000400824	C19orf44	Q9H6X5	657 aa		40.44	■■■■■ 4.06
AFDN-208	ENST00000400824	CADPS2	Q86UW7	1296 aa		40.43	■■■■■ 4.06
AFDN-208	ENST00000400824	NUP155	O75694	1391 aa		40.43	■■■■■ 4.06
AFDN-208	ENST00000400824	TRPM2	O94759	1503 aa		40.41	■■■■■ 4.06
AFDN-208	ENST00000400824	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.39	■■■■■ 4.06
AFDN-208	ENST00000400824	ATF3	P18847	181 aa		40.38	■■■■■ 4.05
AFDN-208	ENST00000400824	PTPRU	Q92729	1446 aa		40.38	■■■■■ 4.05
AFDN-208	ENST00000400824	SETD1A	O15047	1707 aa	Known RBP	40.37	■■■■■ 4.05
AFDN-208	ENST00000400824	AMOTL2	Q9Y2J4	779 aa		40.37	■■■■■ 4.05
AFDN-208	ENST00000400824	LRP6	O75581	1613 aa		40.37	■■■■■ 4.05
AFDN-208	ENST00000400824	SPATA31A6	Q5VVP1	1343 aa		40.37	■■■■■ 4.05
AFDN-208	ENST00000400824	SHPRH	Q149N8	1683 aa		40.32	■■■■■ 4.05
AFDN-208	ENST00000400824	NRXN3	Q9Y4C0	1643 aa		40.31	■■■■■ 4.04
AFDN-208	ENST00000400824	ITGAE	P38570	1179 aa		40.29	■■■■■ 4.04
AFDN-208	ENST00000400824	SPHKAP	Q2M3C7	1700 aa		40.28	■■■■■ 4.04
AFDN-208	ENST00000400824	XRN1	Q8IZH2	1706 aa	Known RBP	40.27	■■■■■ 4.04
AFDN-208	ENST00000400824	SETBP1	Q9Y6X0	1596 aa		40.27	■■■■■ 4.04
AFDN-208	ENST00000400824	BRINP3	Q76B58	766 aa		40.26	■■■■■ 4.04
AFDN-208	ENST00000400824	DCC	P43146	1447 aa		40.25	■■■■■ 4.03
AFDN-208	ENST00000400824	MEX3C	Q5U5Q3	659 aa	Known RBP	40.24	■■■■■ 4.03
AFDN-208	ENST00000400824	ZNF772	Q68DY9	489 aa	Predicted RBP	40.22	■■■■■ 4.03
AFDN-208	ENST00000400824	ZNF326	Q5BKZ1	582 aa	Known RBP	40.16	■■■■■ 4.02
AFDN-208	ENST00000400824	ASXL1	Q8IXJ9	1541 aa		40.16	■■■■■ 4.02
AFDN-208	ENST00000400824	MET	P08581	1390 aa		40.15	■■■■■ 4.02
AFDN-208	ENST00000400824	MST1R	Q04912	1400 aa		40.15	■■■■■ 4.02
AFDN-208	ENST00000400824	NHSL1	Q5SYE7	1610 aa		40.11	■■■■■ 4.01
AFDN-208	ENST00000400824	SETD5	Q9C0A6	1442 aa		40.1	■■■■■ 4.01
AFDN-208	ENST00000400824	PPARGC1B	Q86YN6	1023 aa	Known RBP	40.09	■■■■■ 4.01
AFDN-208	ENST00000400824	CLTCL1	P53675	1640 aa		40.08	■■■■■ 4.01
AFDN-208	ENST00000400824	NEXMIF	Q5QGS0	1516 aa		40.07	■■■■■ 4.01
AFDN-208	ENST00000400824	NUTM2B	A6NNL0	878 aa	Predicted RBP	40.07	■■■■■ 4.01
AFDN-208	ENST00000400824	NUTM2E	B1AL46	878 aa	Predicted RBP	40.07	■■■■■ 4.01
AFDN-208	ENST00000400824	NUTM2A	Q8IVF1	878 aa	Predicted RBP	40.07	■■■■■ 4.01
AFDN-208	ENST00000400824	TRIM52	Q96A61	297 aa		40.07	■■■■■ 4.01
AFDN-208	ENST00000400824	UPF1	Q92900	1129 aa	Known RBP eCLIP	40.04	■■■■■ 4
AFDN-208	ENST00000400824	ADGRL3	Q9HAR2	1447 aa		40.04	■■■■■ 4
AFDN-208	ENST00000400824	RXRB	P28702	533 aa		40.02	■■■■■ 4
AFDN-208	ENST00000400824	KIF1B	O60333	1816 aa		40	■■■■□ 3.99
AFDN-208	ENST00000400824	NALCN	Q8IZF0	1738 aa		40	■■■■□ 3.99
AFDN-208	ENST00000400824	LRRC59	Q96AG4	307 aa	Known RBP	40	■■■■□ 3.99
AFDN-208	ENST00000400824	AFF2	P51816	1311 aa		39.97	■■■■□ 3.99
AFDN-208	ENST00000400824	CDK12	Q9NYV4	1490 aa	Predicted RBP	39.96	■■■■□ 3.99
AFDN-208	ENST00000400824	DDX17	Q92841	729 aa	Known RBP	39.94	■■■■□ 3.98
AFDN-208	ENST00000400824	PNPLA6	Q8IY17	1366 aa		39.92	■■■■□ 3.98
AFDN-208	ENST00000400824	NAIP	Q13075	1403 aa		39.91	■■■■□ 3.98
AFDN-208	ENST00000400824	RRBP1	Q9P2E9	1410 aa	Known RBP	39.89	■■■■□ 3.98
AFDN-208	ENST00000400824	C1orf167	Q5SNV9	1468 aa		39.88	■■■■□ 3.97
AFDN-208	ENST00000400824	PTCH1	Q13635	1447 aa		39.86	■■■■□ 3.97
AFDN-208	ENST00000400824	LAMC1	P11047	1609 aa		39.84	■■■■□ 3.97
AFDN-208	ENST00000400824	C8orf37	Q96NL8	207 aa		39.84	■■■■□ 3.97
AFDN-208	ENST00000400824	VGF	O15240	615 aa	Predicted RBP	39.83	■■■■□ 3.97
AFDN-208	ENST00000400824	ROBO2	Q9HCK4	1378 aa		39.82	■■■■□ 3.96
AFDN-208	ENST00000400824	QTRT2	Q9H974	415 aa	Known RBP	39.79	■■■■□ 3.96
AFDN-208	ENST00000400824	PRAG1	Q86YV5	1406 aa		39.79	■■■■□ 3.96
AFDN-208	ENST00000400824	RBM6	P78332	1123 aa	Known RBP	39.77	■■■■□ 3.96
AFDN-208	ENST00000400824	RGS12	O14924	1447 aa		39.76	■■■■□ 3.96
AFDN-208	ENST00000400824	RPGRIP1L	Q68CZ1	1315 aa		39.76	■■■■□ 3.96
AFDN-208	ENST00000400824	SOS2	Q07890	1332 aa	Predicted RBP	39.75	■■■■□ 3.95
AFDN-208	ENST00000400824	ORAI2	Q96SN7	254 aa		39.75	■■■■□ 3.95
AFDN-208	ENST00000400824	PPL	O60437	1756 aa		39.73	■■■■□ 3.95
AFDN-208	ENST00000400824	ADAMTS2	O95450	1211 aa		39.71	■■■■□ 3.95
AFDN-208	ENST00000400824	NGLY1	Q96IV0	654 aa		39.7	■■■■□ 3.95
AFDN-208	ENST00000400824	HFM1	A2PYH4	1435 aa		39.7	■■■■□ 3.95
AFDN-208	ENST00000400824	SLC4A1AP	Q9BWU0	796 aa	Known RBP	39.67	■■■■□ 3.94
AFDN-208	ENST00000400824	COL22A1	Q8NFW1	1626 aa	Predicted RBP	39.61	■■■■□ 3.93
AFDN-208	ENST00000400824	USP21	Q9UK80	565 aa		39.57	■■■■□ 3.93
AFDN-208	ENST00000400824	CDC42BPG	Q6DT37	1551 aa		39.57	■■■■□ 3.92

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms