RNA–Protein interactions for RNA: ENST00000400163.6

COL4A2-202, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 5

Gene COL4A2, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-202ENST00000400163 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
COL4A2-202ENST00000400163 MSH6P52701 1360 aa28.65■■■□□ 2.18
COL4A2-202ENST00000400163 ADGRL2O95490 1459 aa28.64■■■□□ 2.17
COL4A2-202ENST00000400163 SLAIN2Q9P270 581 aa28.63■■■□□ 2.17
COL4A2-202ENST00000400163 MYO5BQ9ULV0 1848 aa28.62■■■□□ 2.17
COL4A2-202ENST00000400163 RPRD2Q5VT52 1461 aaKnown RBP28.62■■■□□ 2.17
COL4A2-202ENST00000400163 CHD2O14647 1828 aaKnown RBP28.61■■■□□ 2.17
COL4A2-202ENST00000400163 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
COL4A2-202ENST00000400163 PLEKHG1Q9ULL1 1385 aa28.6■■■□□ 2.17
COL4A2-202ENST00000400163 ANKRD50Q9ULJ7 1429 aa28.59■■■□□ 2.17
COL4A2-202ENST00000400163 PHLPP1O60346 1717 aa28.58■■■□□ 2.17
COL4A2-202ENST00000400163 PPP1R15AO75807 674 aaPredicted RBP28.57■■■□□ 2.16
COL4A2-202ENST00000400163 HDGFP51858 240 aaKnown RBP28.57■■■□□ 2.16
COL4A2-202ENST00000400163 RIMS2Q9UQ26 1411 aa28.57■■■□□ 2.16
COL4A2-202ENST00000400163 FAM50AQ14320 339 aaKnown RBP28.56■■■□□ 2.16
COL4A2-202ENST00000400163 GCC2Q8IWJ2 1684 aa28.56■■■□□ 2.16
COL4A2-202ENST00000400163 TMEM131LA2VDJ0 1609 aa28.54■■■□□ 2.16
COL4A2-202ENST00000400163 JCADQ9P266 1359 aa28.54■■■□□ 2.16
COL4A2-202ENST00000400163 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
COL4A2-202ENST00000400163 CHGAP10645 457 aaKnown RBP28.48■■■□□ 2.15
COL4A2-202ENST00000400163 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.48■■■□□ 2.15
COL4A2-202ENST00000400163 NCOA3Q9Y6Q9 1424 aa28.48■■■□□ 2.15
COL4A2-202ENST00000400163 COL16A1Q07092 1604 aaPredicted RBP28.47■■■□□ 2.15
COL4A2-202ENST00000400163 C14orf37Q86TY3 774 aa28.46■■■□□ 2.15
COL4A2-202ENST00000400163 SETD1AO15047 1707 aaKnown RBP28.46■■■□□ 2.15
COL4A2-202ENST00000400163 NUTM2DQ5VT03 806 aaPredicted RBP28.45■■■□□ 2.14
COL4A2-202ENST00000400163 ADAMTS13Q76LX8 1427 aa28.44■■■□□ 2.14
COL4A2-202ENST00000400163 UNC13BO14795 1591 aa28.44■■■□□ 2.14
COL4A2-202ENST00000400163 E9PCH4 1651 aa28.42■■■□□ 2.14
COL4A2-202ENST00000400163 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.41■■■□□ 2.14
COL4A2-202ENST00000400163 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
COL4A2-202ENST00000400163 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
COL4A2-202ENST00000400163 SPATA31A6Q5VVP1 1343 aa28.4■■■□□ 2.14
COL4A2-202ENST00000400163 PIK3R4Q99570 1358 aa28.39■■■□□ 2.14
COL4A2-202ENST00000400163 DIP2AQ14689 1571 aa28.39■■■□□ 2.14
COL4A2-202ENST00000400163 LRP6O75581 1613 aa28.39■■■□□ 2.13
COL4A2-202ENST00000400163 ATF3P18847 181 aa28.38■■■□□ 2.13
COL4A2-202ENST00000400163 AHDC1Q5TGY3 1603 aaPredicted RBP28.36■■■□□ 2.13
COL4A2-202ENST00000400163 MEX3CQ5U5Q3 659 aaKnown RBP28.35■■■□□ 2.13
COL4A2-202ENST00000400163 IQGAP3Q86VI3 1631 aa28.33■■■□□ 2.13
COL4A2-202ENST00000400163 ZNF772Q68DY9 489 aaPredicted RBP28.33■■■□□ 2.13
COL4A2-202ENST00000400163 AMOTL2Q9Y2J4 779 aa28.33■■■□□ 2.13
COL4A2-202ENST00000400163 SHPRHQ149N8 1683 aa28.32■■■□□ 2.12
COL4A2-202ENST00000400163 TRPM2O94759 1503 aa28.32■■■□□ 2.12
COL4A2-202ENST00000400163 ROCK1Q13464 1354 aa28.31■■■□□ 2.12
COL4A2-202ENST00000400163 PTPRUQ92729 1446 aa28.31■■■□□ 2.12
COL4A2-202ENST00000400163 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
COL4A2-202ENST00000400163 NUP155O75694 1391 aa28.28■■■□□ 2.12
COL4A2-202ENST00000400163 TRIM52Q96A61 297 aa28.27■■■□□ 2.12
COL4A2-202ENST00000400163 UPF1Q92900 1129 aaKnown RBP eCLIP28.25■■■□□ 2.11
COL4A2-202ENST00000400163 DCCP43146 1447 aa28.23■■■□□ 2.11
COL4A2-202ENST00000400163 NUTM2BA6NNL0 878 aaPredicted RBP28.22■■■□□ 2.11
COL4A2-202ENST00000400163 NUTM2EB1AL46 878 aaPredicted RBP28.22■■■□□ 2.11
COL4A2-202ENST00000400163 NUTM2AQ8IVF1 878 aaPredicted RBP28.22■■■□□ 2.11
COL4A2-202ENST00000400163 NRXN3Q9Y4C0 1643 aa28.21■■■□□ 2.11
COL4A2-202ENST00000400163 RXRBP28702 533 aa28.21■■■□□ 2.11
COL4A2-202ENST00000400163 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
COL4A2-202ENST00000400163 ASXL1Q8IXJ9 1541 aa28.19■■■□□ 2.1
COL4A2-202ENST00000400163 SETBP1Q9Y6X0 1596 aa28.19■■■□□ 2.1
COL4A2-202ENST00000400163 ITGAEP38570 1179 aa28.18■■■□□ 2.1
COL4A2-202ENST00000400163 MST1RQ04912 1400 aa28.17■■■□□ 2.1
COL4A2-202ENST00000400163 SETD5Q9C0A6 1442 aa28.16■■■□□ 2.1
COL4A2-202ENST00000400163 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
COL4A2-202ENST00000400163 ZNF326Q5BKZ1 582 aaKnown RBP28.15■■■□□ 2.1
COL4A2-202ENST00000400163 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.1
COL4A2-202ENST00000400163 METP08581 1390 aa28.14■■■□□ 2.1
COL4A2-202ENST00000400163 AFF2P51816 1311 aa28.13■■■□□ 2.09
COL4A2-202ENST00000400163 LRRC59Q96AG4 307 aaKnown RBP28.12■■■□□ 2.09
COL4A2-202ENST00000400163 CDK12Q9NYV4 1490 aaPredicted RBP28.12■■■□□ 2.09
COL4A2-202ENST00000400163 DDX17Q92841 729 aaKnown RBP28.08■■■□□ 2.09
COL4A2-202ENST00000400163 ADGRL3Q9HAR2 1447 aa28.08■■■□□ 2.09
COL4A2-202ENST00000400163 NALCNQ8IZF0 1738 aa28.04■■■□□ 2.08
COL4A2-202ENST00000400163 PNPLA6Q8IY17 1366 aa28.04■■■□□ 2.08
COL4A2-202ENST00000400163 C8orf37Q96NL8 207 aa28.04■■■□□ 2.08
COL4A2-202ENST00000400163 NEXMIFQ5QGS0 1516 aa28.03■■■□□ 2.08
COL4A2-202ENST00000400163 QTRT2Q9H974 415 aaKnown RBP28.02■■■□□ 2.08
COL4A2-202ENST00000400163 CLTCL1P53675 1640 aa28.02■■■□□ 2.08
COL4A2-202ENST00000400163 RBM6P78332 1123 aaKnown RBP28■■■□□ 2.07
COL4A2-202ENST00000400163 PPARGC1BQ86YN6 1023 aaKnown RBP27.99■■■□□ 2.07
COL4A2-202ENST00000400163 RGS12O14924 1447 aa27.98■■■□□ 2.07
COL4A2-202ENST00000400163 KIF1BO60333 1816 aa27.97■■■□□ 2.07
COL4A2-202ENST00000400163 C1orf167Q5SNV9 1468 aa27.97■■■□□ 2.07
COL4A2-202ENST00000400163 ADAMTS2O95450 1211 aa27.95■■■□□ 2.06
COL4A2-202ENST00000400163 NGLY1Q96IV0 654 aa27.95■■■□□ 2.06
COL4A2-202ENST00000400163 LAMC1P11047 1609 aa27.92■■■□□ 2.06
COL4A2-202ENST00000400163 ORAI2Q96SN7 254 aa27.92■■■□□ 2.06
COL4A2-202ENST00000400163 ROBO2Q9HCK4 1378 aa27.91■■■□□ 2.06
COL4A2-202ENST00000400163 PTCH1Q13635 1447 aa27.91■■■□□ 2.06
COL4A2-202ENST00000400163 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
COL4A2-202ENST00000400163 VGFO15240 615 aaPredicted RBP27.9■■■□□ 2.06
COL4A2-202ENST00000400163 USP21Q9UK80 565 aa27.85■■■□□ 2.05
COL4A2-202ENST00000400163 NAIPQ13075 1403 aa27.84■■■□□ 2.05
COL4A2-202ENST00000400163 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
COL4A2-202ENST00000400163 RPGRIP1LQ68CZ1 1315 aa27.82■■■□□ 2.04
COL4A2-202ENST00000400163 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
COL4A2-202ENST00000400163 TRPC5Q9UL62 973 aaPredicted RBP27.81■■■□□ 2.04
COL4A2-202ENST00000400163 HFM1A2PYH4 1435 aa27.8■■■□□ 2.04
COL4A2-202ENST00000400163 ATAD2Q6PL18 1390 aa27.79■■■□□ 2.04
COL4A2-202ENST00000400163 PPLO60437 1756 aa27.78■■■□□ 2.04
COL4A2-202ENST00000400163 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms