RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 RIMS2Q9UQ26 1411 aa13.28□□□□□ -0.28
SNRPN-204ENST00000400098 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
SNRPN-204ENST00000400098 IFT172Q9UG01 1749 aa13.27□□□□□ -0.29
SNRPN-204ENST00000400098 PPLO60437 1756 aa13.27□□□□□ -0.29
SNRPN-204ENST00000400098 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
SNRPN-204ENST00000400098 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
SNRPN-204ENST00000400098 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
SNRPN-204ENST00000400098 NRXN3Q9Y4C0 1643 aa13.25□□□□□ -0.29
SNRPN-204ENST00000400098 EID1Q9Y6B2 187 aa13.23□□□□□ -0.29
SNRPN-204ENST00000400098 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
SNRPN-204ENST00000400098 HRCP23327 699 aa13.22□□□□□ -0.29
SNRPN-204ENST00000400098 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
SNRPN-204ENST00000400098 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
SNRPN-204ENST00000400098 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
SNRPN-204ENST00000400098 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
SNRPN-204ENST00000400098 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
SNRPN-204ENST00000400098 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
SNRPN-204ENST00000400098 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
SNRPN-204ENST00000400098 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
SNRPN-204ENST00000400098 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
SNRPN-204ENST00000400098 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
SNRPN-204ENST00000400098 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
SNRPN-204ENST00000400098 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
SNRPN-204ENST00000400098 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
SNRPN-204ENST00000400098 DIP2AQ14689 1571 aa13.18□□□□□ -0.3
SNRPN-204ENST00000400098 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
SNRPN-204ENST00000400098 ANKRD30BQ9BXX2 1392 aa13.18□□□□□ -0.3
SNRPN-204ENST00000400098 CPS1P31327 1500 aa13.18□□□□□ -0.3
SNRPN-204ENST00000400098 BCANQ96GW7 911 aa13.17□□□□□ -0.3
SNRPN-204ENST00000400098 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRPN-204ENST00000400098 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
SNRPN-204ENST00000400098 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
SNRPN-204ENST00000400098 RGL3Q3MIN7 710 aa13.14□□□□□ -0.31
SNRPN-204ENST00000400098 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
SNRPN-204ENST00000400098 IQSEC2Q5JU85 1478 aa13.13□□□□□ -0.31
SNRPN-204ENST00000400098 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
SNRPN-204ENST00000400098 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
SNRPN-204ENST00000400098 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
SNRPN-204ENST00000400098 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
SNRPN-204ENST00000400098 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
SNRPN-204ENST00000400098 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
SNRPN-204ENST00000400098 TBX22Q9Y458 520 aa13.1□□□□□ -0.31
SNRPN-204ENST00000400098 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
SNRPN-204ENST00000400098 METP08581 1390 aa13.09□□□□□ -0.31
SNRPN-204ENST00000400098 KCNA6P17658 529 aa13.09□□□□□ -0.31
SNRPN-204ENST00000400098 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
SNRPN-204ENST00000400098 ASXL1Q8IXJ9 1541 aa13.08□□□□□ -0.31
SNRPN-204ENST00000400098 FBXO41Q8TF61 875 aa13.08□□□□□ -0.32
SNRPN-204ENST00000400098 MYOM2P54296 1465 aa13.08□□□□□ -0.32
SNRPN-204ENST00000400098 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
SNRPN-204ENST00000400098 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
SNRPN-204ENST00000400098 LAMC1P11047 1609 aa13.06□□□□□ -0.32
SNRPN-204ENST00000400098 PIK3C2GO75747 1445 aa13.06□□□□□ -0.32
SNRPN-204ENST00000400098 PCGF6Q9BYE7 350 aa13.06□□□□□ -0.32
SNRPN-204ENST00000400098 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
SNRPN-204ENST00000400098 PIK3R4Q99570 1358 aa13.06□□□□□ -0.32
SNRPN-204ENST00000400098 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
SNRPN-204ENST00000400098 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
SNRPN-204ENST00000400098 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
SNRPN-204ENST00000400098 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
SNRPN-204ENST00000400098 SIN3AQ96ST3 1273 aa13.04□□□□□ -0.32
SNRPN-204ENST00000400098 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
SNRPN-204ENST00000400098 UBAP1LF5GYI3 381 aa13.03□□□□□ -0.32
SNRPN-204ENST00000400098 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
SNRPN-204ENST00000400098 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
SNRPN-204ENST00000400098 ADGRB1O14514 1584 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 CFAP70Q5T0N1 1121 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
SNRPN-204ENST00000400098 PTCH1Q13635 1447 aa12.98□□□□□ -0.33
SNRPN-204ENST00000400098 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
SNRPN-204ENST00000400098 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
SNRPN-204ENST00000400098 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
SNRPN-204ENST00000400098 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
SNRPN-204ENST00000400098 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.33
SNRPN-204ENST00000400098 MSH6P52701 1360 aa12.96□□□□□ -0.33
SNRPN-204ENST00000400098 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
SNRPN-204ENST00000400098 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
SNRPN-204ENST00000400098 TOM1O60784 492 aa12.96□□□□□ -0.33
SNRPN-204ENST00000400098 STK26Q9P289 416 aa12.96□□□□□ -0.33
SNRPN-204ENST00000400098 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
SNRPN-204ENST00000400098 TECPR2O15040 1411 aa12.95□□□□□ -0.34
SNRPN-204ENST00000400098 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
SNRPN-204ENST00000400098 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
SNRPN-204ENST00000400098 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
SNRPN-204ENST00000400098 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
SNRPN-204ENST00000400098 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
SNRPN-204ENST00000400098 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
SNRPN-204ENST00000400098 WAPLQ7Z5K2 1190 aa12.92□□□□□ -0.34
SNRPN-204ENST00000400098 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
SNRPN-204ENST00000400098 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
SNRPN-204ENST00000400098 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
SNRPN-204ENST00000400098 PHLPP1O60346 1717 aa12.91□□□□□ -0.34
SNRPN-204ENST00000400098 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
SNRPN-204ENST00000400098 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
SNRPN-204ENST00000400098 MST1RQ04912 1400 aa12.9□□□□□ -0.34
SNRPN-204ENST00000400098 C19orf44Q9H6X5 657 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms