RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-217ENST00000399641 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 BECN2A8MW95 431 aa13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 PKD2Q13563 968 aa13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 COG3Q96JB2 828 aa13.6□□□□□ -0.23
CACNA1C-217ENST00000399641 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 CSPP1Q1MSJ5 1256 aa13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 TSPYL1Q9H0U9 437 aa13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
CACNA1C-217ENST00000399641 NACADO15069 1562 aa13.58□□□□□ -0.23
CACNA1C-217ENST00000399641 RAPGEF4Q8WZA2 1011 aa13.58□□□□□ -0.23
CACNA1C-217ENST00000399641 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 SOGA1O94964 1423 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 EEA1Q15075 1411 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 CLASRPQ8N2M8 674 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 GOLGA3Q08378 1498 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-217ENST00000399641 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
CACNA1C-217ENST00000399641 FYB1O15117 783 aa13.57□□□□□ -0.24
CACNA1C-217ENST00000399641 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
CACNA1C-217ENST00000399641 EPS15P42566 896 aa13.56□□□□□ -0.24
CACNA1C-217ENST00000399641 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
CACNA1C-217ENST00000399641 C16orf71Q8IYS4 520 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-217ENST00000399641 IPO7O95373 1038 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-217ENST00000399641 NF2P35240 595 aa13.56□□□□□ -0.24
CACNA1C-217ENST00000399641 CDR1P51861 262 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 SYNE3Q6ZMZ3 975 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 PDILTQ8N807 584 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 PSMD1Q99460 953 aa13.55□□□□□ -0.24
CACNA1C-217ENST00000399641 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
CACNA1C-217ENST00000399641 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-217ENST00000399641 NUP155O75694 1391 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 PHF14O94880 888 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 CEP164Q9UPV0 1460 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
CACNA1C-217ENST00000399641 SEPT7Q16181 437 aaKnown RBP13.52□□□□□ -0.25
CACNA1C-217ENST00000399641 CCDC27Q2M243 656 aa13.52□□□□□ -0.25
CACNA1C-217ENST00000399641 ESCO1Q5FWF5 840 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
CACNA1C-217ENST00000399641 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 TICAM2Q86XR7 235 aa13.5□□□□□ -0.25
CACNA1C-217ENST00000399641 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-217ENST00000399641 MNS1Q8NEH6 495 aa13.49□□□□□ -0.25
CACNA1C-217ENST00000399641 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CACNA1C-217ENST00000399641 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CACNA1C-217ENST00000399641 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 GRM1Q13255 1194 aa13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 FAM193AP78312 1265 aa13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 TRIM29Q14134 588 aa13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-217ENST00000399641 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-217ENST00000399641 HSP90B2PQ58FF3 399 aa13.46□□□□□ -0.25
CACNA1C-217ENST00000399641 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
CACNA1C-217ENST00000399641 PLIN1O60240 522 aa13.46□□□□□ -0.25
CACNA1C-217ENST00000399641 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.26
CACNA1C-217ENST00000399641 OFD1O75665 1012 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 NEBLO76041 1014 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 GIMAP7Q8NHV1 300 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
CACNA1C-217ENST00000399641 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 BRPF1P55201 1214 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 CCDC173Q0VFZ6 552 aa13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
CACNA1C-217ENST00000399641 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms