RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
ITSN1-208ENST00000399349 MARCH6O60337 910 aa16.19■□□□□ 0.18
ITSN1-208ENST00000399349 HMOX1P09601 288 aa16.18■□□□□ 0.18
ITSN1-208ENST00000399349 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
ITSN1-208ENST00000399349 BECN2A8MW95 431 aa16.18■□□□□ 0.18
ITSN1-208ENST00000399349 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
ITSN1-208ENST00000399349 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
ITSN1-208ENST00000399349 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
ITSN1-208ENST00000399349 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
ITSN1-208ENST00000399349 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
ITSN1-208ENST00000399349 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
ITSN1-208ENST00000399349 GOLGA6L19H0YKK7 550 aa16.16■□□□□ 0.18
ITSN1-208ENST00000399349 TNNT3P45378 269 aaPredicted RBP16.16■□□□□ 0.18
ITSN1-208ENST00000399349 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
ITSN1-208ENST00000399349 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
ITSN1-208ENST00000399349 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
ITSN1-208ENST00000399349 TPM3P06753 285 aa16.15■□□□□ 0.18
ITSN1-208ENST00000399349 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
ITSN1-208ENST00000399349 PTPRGP23470 1445 aa16.14■□□□□ 0.17
ITSN1-208ENST00000399349 REC8O95072 547 aa16.14■□□□□ 0.17
ITSN1-208ENST00000399349 TPD52L1Q16890 204 aaPredicted RBP16.14■□□□□ 0.17
ITSN1-208ENST00000399349 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
ITSN1-208ENST00000399349 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
ITSN1-208ENST00000399349 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
ITSN1-208ENST00000399349 APPP05067 770 aa16.13■□□□□ 0.17
ITSN1-208ENST00000399349 IFIT2P09913 472 aaKnown RBP16.13■□□□□ 0.17
ITSN1-208ENST00000399349 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
ITSN1-208ENST00000399349 TMEM132EQ6IEE7 984 aa16.12■□□□□ 0.17
ITSN1-208ENST00000399349 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
ITSN1-208ENST00000399349 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
ITSN1-208ENST00000399349 RAD21O60216 631 aa16.12■□□□□ 0.17
ITSN1-208ENST00000399349 EVA1CP58658 441 aa16.12■□□□□ 0.17
ITSN1-208ENST00000399349 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
ITSN1-208ENST00000399349 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
ITSN1-208ENST00000399349 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
ITSN1-208ENST00000399349 VPS37CA5D8V6 355 aaPredicted RBP16.11■□□□□ 0.17
ITSN1-208ENST00000399349 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 SKOR2Q2VWA4 1001 aaPredicted RBP16.11■□□□□ 0.17
ITSN1-208ENST00000399349 FOSBP53539 338 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
ITSN1-208ENST00000399349 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
ITSN1-208ENST00000399349 NFKBIBQ15653 356 aa16.1■□□□□ 0.17
ITSN1-208ENST00000399349 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
ITSN1-208ENST00000399349 PKNOX2Q96KN3 472 aa16.09■□□□□ 0.17
ITSN1-208ENST00000399349 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
ITSN1-208ENST00000399349 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
ITSN1-208ENST00000399349 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
ITSN1-208ENST00000399349 CPLX1O14810 134 aa16.08■□□□□ 0.17
ITSN1-208ENST00000399349 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.17
ITSN1-208ENST00000399349 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.16
ITSN1-208ENST00000399349 C22orf23Q9BZE7 217 aa16.07■□□□□ 0.16
ITSN1-208ENST00000399349 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
ITSN1-208ENST00000399349 PSME1Q06323 249 aa16.07■□□□□ 0.16
ITSN1-208ENST00000399349 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
ITSN1-208ENST00000399349 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
ITSN1-208ENST00000399349 CEP89Q96ST8 783 aa16.07■□□□□ 0.16
ITSN1-208ENST00000399349 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
ITSN1-208ENST00000399349 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
ITSN1-208ENST00000399349 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
ITSN1-208ENST00000399349 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
ITSN1-208ENST00000399349 PRM3Q9NNZ6 103 aa16.06■□□□□ 0.16
ITSN1-208ENST00000399349 MTHFSP49914 203 aa16.05■□□□□ 0.16
ITSN1-208ENST00000399349 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
ITSN1-208ENST00000399349 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
ITSN1-208ENST00000399349 GNAI1P63096 354 aa16.04■□□□□ 0.16
ITSN1-208ENST00000399349 SMC3Q9UQE7 1217 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 TRIM29Q14134 588 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
ITSN1-208ENST00000399349 TCP11L2Q8N4U5 519 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 NEUROD6Q96NK8 337 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 IGF1RP08069 1367 aa16.03■□□□□ 0.16
ITSN1-208ENST00000399349 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.16
ITSN1-208ENST00000399349 DDX58O95786 925 aaKnown RBP16.02■□□□□ 0.15
ITSN1-208ENST00000399349 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.15
ITSN1-208ENST00000399349 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.15
ITSN1-208ENST00000399349 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
ITSN1-208ENST00000399349 TRDNQ13061 729 aa16.01■□□□□ 0.15
ITSN1-208ENST00000399349 RNF214Q8ND24 703 aa16.01■□□□□ 0.15
ITSN1-208ENST00000399349 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
ITSN1-208ENST00000399349 RNF20Q5VTR2 975 aa16■□□□□ 0.15
ITSN1-208ENST00000399349 VPS37DQ86XT2 251 aa16■□□□□ 0.15
ITSN1-208ENST00000399349 LRRFIP1Q32MZ4 808 aaKnown RBP16■□□□□ 0.15
ITSN1-208ENST00000399349 NFXL1Q6ZNB6 911 aa16■□□□□ 0.15
ITSN1-208ENST00000399349 TPM1P09493 284 aa16■□□□□ 0.15
ITSN1-208ENST00000399349 ZNF428Q96B54 188 aa16■□□□□ 0.15
ITSN1-208ENST00000399349 KDM4AO75164 1064 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 CNTLNQ9NXG0 1405 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 C1orf115Q9H7X2 142 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
ITSN1-208ENST00000399349 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
ITSN1-208ENST00000399349 NLRP2Q9NX02 1062 aa15.98■□□□□ 0.15
ITSN1-208ENST00000399349 CHMP4CQ96CF2 233 aa15.98■□□□□ 0.15
ITSN1-208ENST00000399349 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms