RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC144A-206ENST00000399273 BECN2A8MW95 431 aa14.2□□□□□ -0.14
CCDC144A-206ENST00000399273 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
CCDC144A-206ENST00000399273 GPS2Q13227 327 aa14.2□□□□□ -0.14
CCDC144A-206ENST00000399273 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
CCDC144A-206ENST00000399273 CPLX1O14810 134 aa14.19□□□□□ -0.14
CCDC144A-206ENST00000399273 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
CCDC144A-206ENST00000399273 DDX11L8A8MPP1 907 aa14.19□□□□□ -0.14
CCDC144A-206ENST00000399273 NLRP13Q86W25 1043 aa14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 NFXL1Q6ZNB6 911 aa14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 ARID3AQ99856 593 aa14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 CCAR2Q8N163 923 aaKnown RBP14.18□□□□□ -0.14
CCDC144A-206ENST00000399273 EPS15P42566 896 aa14.17□□□□□ -0.14
CCDC144A-206ENST00000399273 RNF20Q5VTR2 975 aa14.17□□□□□ -0.14
CCDC144A-206ENST00000399273 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
CCDC144A-206ENST00000399273 SF3B2Q13435 895 aaKnown RBP14.17□□□□□ -0.14
CCDC144A-206ENST00000399273 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
CCDC144A-206ENST00000399273 EIF2S2P20042 333 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 TDRD9Q8NDG6 1382 aaKnown RBP14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 ANKRD45Q5TZF3 282 aa14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 PDE3BQ13370 1112 aa14.16□□□□□ -0.14
CCDC144A-206ENST00000399273 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCDC144A-206ENST00000399273 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
CCDC144A-206ENST00000399273 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.14
CCDC144A-206ENST00000399273 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.14
CCDC144A-206ENST00000399273 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
CCDC144A-206ENST00000399273 BRMS1Q9HCU9 246 aa14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 MIA2Q96PC5 1412 aa14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 RDXP35241 583 aaKnown RBP14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 REC8O95072 547 aa14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC144A-206ENST00000399273 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCDC144A-206ENST00000399273 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
CCDC144A-206ENST00000399273 ANO2Q9NQ90 1003 aa14.13□□□□□ -0.15
CCDC144A-206ENST00000399273 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
CCDC144A-206ENST00000399273 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
CCDC144A-206ENST00000399273 IKQ13123 557 aaPredicted RBP14.12□□□□□ -0.15
CCDC144A-206ENST00000399273 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
CCDC144A-206ENST00000399273 TMEM132AQ24JP5 1023 aa14.11□□□□□ -0.15
CCDC144A-206ENST00000399273 XBP1P17861 261 aa14.11□□□□□ -0.15
CCDC144A-206ENST00000399273 CCDC27Q2M243 656 aa14.11□□□□□ -0.15
CCDC144A-206ENST00000399273 RRP7AQ9Y3A4 280 aaKnown RBP14.1□□□□□ -0.15
CCDC144A-206ENST00000399273 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
CCDC144A-206ENST00000399273 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
CCDC144A-206ENST00000399273 ZKSCAN2Q63HK3 967 aa14.1□□□□□ -0.15
CCDC144A-206ENST00000399273 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
CCDC144A-206ENST00000399273 JPH4Q96JJ6 628 aa14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 E9PSI1 815 aa14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 RALYLQ86SE5 291 aaKnown RBP14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 KIF6Q6ZMV9 814 aa14.09□□□□□ -0.15
CCDC144A-206ENST00000399273 SKOR2Q2VWA4 1001 aaPredicted RBP14.08□□□□□ -0.15
CCDC144A-206ENST00000399273 NAP1L1P55209 391 aaKnown RBP14.08□□□□□ -0.16
CCDC144A-206ENST00000399273 ERC2O15083 957 aa14.08□□□□□ -0.16
CCDC144A-206ENST00000399273 FHOD3Q2V2M9 1422 aa14.08□□□□□ -0.16
CCDC144A-206ENST00000399273 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 PATL2C9JE40 543 aaKnown RBP14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 CDR1P51861 262 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 RUFY1Q96T51 708 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 CENPQQ7L2Z9 268 aaPredicted RBP14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 FYB1O15117 783 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 HSP90AB4PQ58FF6 505 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 CUX1P39880 1505 aa14.07□□□□□ -0.16
CCDC144A-206ENST00000399273 ELL2O00472 640 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 CCDC173Q0VFZ6 552 aa14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 PPP1R1BQ9UD71 204 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 HSP90AB2PQ58FF8 381 aa14.06□□□□□ -0.16
CCDC144A-206ENST00000399273 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 MYO6Q9UM54 1294 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 PANK3Q9H999 370 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 BICD2Q8TD16 824 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 AK7Q96M32 723 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 DDX19BQ9UMR2 479 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 PTPRGP23470 1445 aa14.05□□□□□ -0.16
CCDC144A-206ENST00000399273 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
CCDC144A-206ENST00000399273 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
CCDC144A-206ENST00000399273 GPRASP1Q5JY77 1395 aa14.04□□□□□ -0.16
CCDC144A-206ENST00000399273 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
CCDC144A-206ENST00000399273 HOMER1Q86YM7 354 aa14.03□□□□□ -0.16
CCDC144A-206ENST00000399273 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
CCDC144A-206ENST00000399273 OFD1O75665 1012 aa14.03□□□□□ -0.16
CCDC144A-206ENST00000399273 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.16
CCDC144A-206ENST00000399273 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
CCDC144A-206ENST00000399273 L3MBTL2Q969R5 705 aa14.02□□□□□ -0.17
CCDC144A-206ENST00000399273 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
CCDC144A-206ENST00000399273 MROH2BQ7Z745 1585 aa14.02□□□□□ -0.17
CCDC144A-206ENST00000399273 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms