RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 LTKP29376 864 aa18.19■□□□□ 0.5
HLA-DQB1-203ENST00000399082 IFT172Q9UG01 1749 aa18.19■□□□□ 0.5
HLA-DQB1-203ENST00000399082 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
HLA-DQB1-203ENST00000399082 RIMS2Q9UQ26 1411 aa18.19■□□□□ 0.5
HLA-DQB1-203ENST00000399082 PPLO60437 1756 aa18.18■□□□□ 0.5
HLA-DQB1-203ENST00000399082 NCKAP5LQ9HCH0 1330 aa18.18■□□□□ 0.5
HLA-DQB1-203ENST00000399082 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
HLA-DQB1-203ENST00000399082 MED14O60244 1454 aa18.16■□□□□ 0.5
HLA-DQB1-203ENST00000399082 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
HLA-DQB1-203ENST00000399082 ANKLE2Q86XL3 938 aa18.13■□□□□ 0.49
HLA-DQB1-203ENST00000399082 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 ZNF326Q5BKZ1 582 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 NUTM2DQ5VT03 806 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
HLA-DQB1-203ENST00000399082 NPHP4O75161 1426 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-203ENST00000399082 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
HLA-DQB1-203ENST00000399082 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
HLA-DQB1-203ENST00000399082 MYOM2P54296 1465 aa18.08■□□□□ 0.49
HLA-DQB1-203ENST00000399082 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-203ENST00000399082 EID1Q9Y6B2 187 aa18.08■□□□□ 0.48
HLA-DQB1-203ENST00000399082 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.48
HLA-DQB1-203ENST00000399082 NRXN1Q9ULB1 1477 aa18.07■□□□□ 0.48
HLA-DQB1-203ENST00000399082 ADAMTS13Q76LX8 1427 aa18.07■□□□□ 0.48
HLA-DQB1-203ENST00000399082 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
HLA-DQB1-203ENST00000399082 NEUROD1Q13562 356 aa18.07■□□□□ 0.48
HLA-DQB1-203ENST00000399082 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
HLA-DQB1-203ENST00000399082 ADGRF5Q8IZF2 1346 aa18.06■□□□□ 0.48
HLA-DQB1-203ENST00000399082 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-203ENST00000399082 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-203ENST00000399082 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-203ENST00000399082 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
HLA-DQB1-203ENST00000399082 HDGFP51858 240 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-203ENST00000399082 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
HLA-DQB1-203ENST00000399082 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
HLA-DQB1-203ENST00000399082 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-203ENST00000399082 DCAF11Q8TEB1 546 aa18.01■□□□□ 0.47
HLA-DQB1-203ENST00000399082 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
HLA-DQB1-203ENST00000399082 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
HLA-DQB1-203ENST00000399082 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
HLA-DQB1-203ENST00000399082 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
HLA-DQB1-203ENST00000399082 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
HLA-DQB1-203ENST00000399082 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
HLA-DQB1-203ENST00000399082 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
HLA-DQB1-203ENST00000399082 METP08581 1390 aa17.96■□□□□ 0.47
HLA-DQB1-203ENST00000399082 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
HLA-DQB1-203ENST00000399082 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
HLA-DQB1-203ENST00000399082 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
HLA-DQB1-203ENST00000399082 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.46
HLA-DQB1-203ENST00000399082 NWD1Q149M9 1564 aa17.96■□□□□ 0.46
HLA-DQB1-203ENST00000399082 LAMC1P11047 1609 aa17.95■□□□□ 0.46
HLA-DQB1-203ENST00000399082 LTBP4Q8N2S1 1624 aa17.95■□□□□ 0.46
HLA-DQB1-203ENST00000399082 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-203ENST00000399082 BCANQ96GW7 911 aa17.94■□□□□ 0.46
HLA-DQB1-203ENST00000399082 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
HLA-DQB1-203ENST00000399082 ADGRB1O14514 1584 aa17.94■□□□□ 0.46
HLA-DQB1-203ENST00000399082 XRN1Q8IZH2 1706 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-203ENST00000399082 CFAP70Q5T0N1 1121 aa17.92■□□□□ 0.46
HLA-DQB1-203ENST00000399082 C14orf93Q9H972 538 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-203ENST00000399082 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
HLA-DQB1-203ENST00000399082 PIK3R4Q99570 1358 aa17.91■□□□□ 0.46
HLA-DQB1-203ENST00000399082 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
HLA-DQB1-203ENST00000399082 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
HLA-DQB1-203ENST00000399082 KCNA6P17658 529 aa17.87■□□□□ 0.45
HLA-DQB1-203ENST00000399082 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
HLA-DQB1-203ENST00000399082 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
HLA-DQB1-203ENST00000399082 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
HLA-DQB1-203ENST00000399082 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-203ENST00000399082 CPS1P31327 1500 aa17.86■□□□□ 0.45
HLA-DQB1-203ENST00000399082 XIRP1Q702N8 1843 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-203ENST00000399082 TECPR2O15040 1411 aa17.85■□□□□ 0.45
HLA-DQB1-203ENST00000399082 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
HLA-DQB1-203ENST00000399082 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
HLA-DQB1-203ENST00000399082 RALGAPBQ86X10 1494 aa17.84■□□□□ 0.45
HLA-DQB1-203ENST00000399082 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-203ENST00000399082 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-203ENST00000399082 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
HLA-DQB1-203ENST00000399082 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
HLA-DQB1-203ENST00000399082 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
HLA-DQB1-203ENST00000399082 GPRASP1Q5JY77 1395 aa17.81■□□□□ 0.44
HLA-DQB1-203ENST00000399082 ABCC11Q96J66 1382 aa17.81■□□□□ 0.44
HLA-DQB1-203ENST00000399082 DLC1Q96QB1 1528 aa17.8■□□□□ 0.44
HLA-DQB1-203ENST00000399082 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-203ENST00000399082 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
HLA-DQB1-203ENST00000399082 STK26Q9P289 416 aa17.78■□□□□ 0.44
HLA-DQB1-203ENST00000399082 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
HLA-DQB1-203ENST00000399082 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
HLA-DQB1-203ENST00000399082 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
HLA-DQB1-203ENST00000399082 ROCK2O75116 1388 aaKnown RBP17.77■□□□□ 0.43
HLA-DQB1-203ENST00000399082 NALCNQ8IZF0 1738 aa17.76■□□□□ 0.43
HLA-DQB1-203ENST00000399082 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-203ENST00000399082 FAM135BQ49AJ0 1406 aa17.75■□□□□ 0.43
HLA-DQB1-203ENST00000399082 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
HLA-DQB1-203ENST00000399082 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
HLA-DQB1-203ENST00000399082 WAPLQ7Z5K2 1190 aa17.73■□□□□ 0.43
HLA-DQB1-203ENST00000399082 CERKQ8TCT0 537 aa17.73■□□□□ 0.43
HLA-DQB1-203ENST00000399082 IQSEC2Q5JU85 1478 aa17.73■□□□□ 0.43
HLA-DQB1-203ENST00000399082 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
HLA-DQB1-203ENST00000399082 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms