RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 NASPP49321 788 aaPredicted RBP11.6□□□□□ -0.55
CDH23-203ENST00000398788 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
CDH23-203ENST00000398788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
CDH23-203ENST00000398788 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
CDH23-203ENST00000398788 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
CDH23-203ENST00000398788 APPP05067 770 aa11.59□□□□□ -0.55
CDH23-203ENST00000398788 MCM4P33991 863 aa11.59□□□□□ -0.55
CDH23-203ENST00000398788 CHAF1AQ13111 956 aaPredicted RBP11.58□□□□□ -0.56
CDH23-203ENST00000398788 SMG6Q86US8 1419 aaKnown RBP11.58□□□□□ -0.56
CDH23-203ENST00000398788 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
CDH23-203ENST00000398788 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
CDH23-203ENST00000398788 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 RALBP1Q15311 655 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 ZNF644Q9H582 1327 aaPredicted RBP11.56□□□□□ -0.56
CDH23-203ENST00000398788 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
CDH23-203ENST00000398788 ZSCAN30Q86W11 494 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 PANK3Q9H999 370 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 SMC4Q9NTJ3 1288 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 IGSF3O75054 1194 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
CDH23-203ENST00000398788 CSB-PGBD3P0DP91 1061 aa11.55□□□□□ -0.56
CDH23-203ENST00000398788 PRG4Q92954 1404 aaPredicted RBP11.55□□□□□ -0.56
CDH23-203ENST00000398788 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
CDH23-203ENST00000398788 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
CDH23-203ENST00000398788 GRIN2AQ12879 1464 aa11.55□□□□□ -0.56
CDH23-203ENST00000398788 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
CDH23-203ENST00000398788 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
CDH23-203ENST00000398788 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
CDH23-203ENST00000398788 GOLGA6L4A6NEF3 574 aa11.53□□□□□ -0.56
CDH23-203ENST00000398788 CCDC173Q0VFZ6 552 aa11.53□□□□□ -0.56
CDH23-203ENST00000398788 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
CDH23-203ENST00000398788 AFAP1Q8N556 730 aa11.53□□□□□ -0.56
CDH23-203ENST00000398788 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
CDH23-203ENST00000398788 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
CDH23-203ENST00000398788 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
CDH23-203ENST00000398788 MPNDQ8N594 471 aa11.51□□□□□ -0.57
CDH23-203ENST00000398788 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
CDH23-203ENST00000398788 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
CDH23-203ENST00000398788 MYOM3Q5VTT5 1437 aa11.5□□□□□ -0.57
CDH23-203ENST00000398788 TERF2IPQ9NYB0 399 aa11.5□□□□□ -0.57
CDH23-203ENST00000398788 CCDC144AA2RUR9 1427 aa11.5□□□□□ -0.57
CDH23-203ENST00000398788 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
CDH23-203ENST00000398788 SKOR2Q2VWA4 1001 aaPredicted RBP11.49□□□□□ -0.57
CDH23-203ENST00000398788 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
CDH23-203ENST00000398788 CHD1O14646 1710 aa11.49□□□□□ -0.57
CDH23-203ENST00000398788 APAF1O14727 1248 aa11.49□□□□□ -0.57
CDH23-203ENST00000398788 ISY1Q9ULR0 285 aaKnown RBP11.49□□□□□ -0.57
CDH23-203ENST00000398788 IPO4Q8TEX9 1081 aaKnown RBP11.49□□□□□ -0.57
CDH23-203ENST00000398788 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
CDH23-203ENST00000398788 MINK1Q8N4C8 1332 aaPredicted RBP11.47□□□□□ -0.57
CDH23-203ENST00000398788 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
CDH23-203ENST00000398788 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 AMPHP49418 695 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 STK31Q9BXU1 1019 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 EIF3AQ14152 1382 aaKnown RBP11.47□□□□□ -0.57
CDH23-203ENST00000398788 CCDC7Q96M83 1385 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 PTMSP20962 102 aa11.47□□□□□ -0.57
CDH23-203ENST00000398788 RNF214Q8ND24 703 aa11.46□□□□□ -0.57
CDH23-203ENST00000398788 COG6Q9Y2V7 657 aa11.46□□□□□ -0.57
CDH23-203ENST00000398788 OFD1O75665 1012 aa11.46□□□□□ -0.57
CDH23-203ENST00000398788 KIF15Q9NS87 1388 aa11.46□□□□□ -0.58
CDH23-203ENST00000398788 IRX3P78415 501 aaPredicted RBP11.46□□□□□ -0.58
CDH23-203ENST00000398788 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.58
CDH23-203ENST00000398788 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.58
CDH23-203ENST00000398788 MCCP23508 829 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 C20orf194Q5TEA3 1177 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
CDH23-203ENST00000398788 NUP160Q12769 1436 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 KIF7Q2M1P5 1343 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
CDH23-203ENST00000398788 CCDC66A2RUB6 948 aa11.44□□□□□ -0.58
CDH23-203ENST00000398788 KIAA0586Q9BVV6 1533 aa11.44□□□□□ -0.58
CDH23-203ENST00000398788 IQGAP2Q13576 1575 aa11.44□□□□□ -0.58
CDH23-203ENST00000398788 CASKIN1Q8WXD9 1431 aa11.44□□□□□ -0.58
CDH23-203ENST00000398788 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
CDH23-203ENST00000398788 FGD6Q6ZV73 1430 aa11.44□□□□□ -0.58
CDH23-203ENST00000398788 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
CDH23-203ENST00000398788 LETM1O95202 739 aaPredicted RBP11.43□□□□□ -0.58
CDH23-203ENST00000398788 C8orf34Q49A92 452 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 CAVIN1Q6NZI2 390 aaKnown RBP11.43□□□□□ -0.58
CDH23-203ENST00000398788 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 TBC1D2Q9BYX2 928 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 FOXD4L6Q3SYB3 417 aaPredicted RBP11.43□□□□□ -0.58
CDH23-203ENST00000398788 FOXD4L3Q6VB84 417 aaPredicted RBP11.43□□□□□ -0.58
CDH23-203ENST00000398788 PHLDB1Q86UU1 1377 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
CDH23-203ENST00000398788 KLHL34Q8N239 644 aa11.42□□□□□ -0.58
CDH23-203ENST00000398788 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
CDH23-203ENST00000398788 UACAQ9BZF9 1416 aa11.42□□□□□ -0.58
CDH23-203ENST00000398788 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms