RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 KIF1BO60333 1816 aa18.6■□□□□ 0.57
PRAME-202ENST00000398743 FRMPD1Q5SYB0 1578 aa18.6■□□□□ 0.57
PRAME-202ENST00000398743 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
PRAME-202ENST00000398743 SYNMO15061 1565 aa18.59■□□□□ 0.57
PRAME-202ENST00000398743 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
PRAME-202ENST00000398743 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
PRAME-202ENST00000398743 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.56
PRAME-202ENST00000398743 INSRP06213 1382 aa18.57■□□□□ 0.56
PRAME-202ENST00000398743 RBM19Q9Y4C8 960 aaKnown RBP18.57■□□□□ 0.56
PRAME-202ENST00000398743 NEO1Q92859 1461 aa18.57■□□□□ 0.56
PRAME-202ENST00000398743 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
PRAME-202ENST00000398743 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
PRAME-202ENST00000398743 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
PRAME-202ENST00000398743 SLC24A1O60721 1099 aa18.56■□□□□ 0.56
PRAME-202ENST00000398743 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
PRAME-202ENST00000398743 MROH2AA6NES4 1674 aa18.56■□□□□ 0.56
PRAME-202ENST00000398743 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
PRAME-202ENST00000398743 NPATQ14207 1427 aa18.55■□□□□ 0.56
PRAME-202ENST00000398743 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
PRAME-202ENST00000398743 GGT6Q6P531 493 aa18.54■□□□□ 0.56
PRAME-202ENST00000398743 B4GALNT3Q6L9W6 998 aa18.54■□□□□ 0.56
PRAME-202ENST00000398743 BLMP54132 1417 aaPredicted RBP18.53■□□□□ 0.56
PRAME-202ENST00000398743 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
PRAME-202ENST00000398743 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.55
PRAME-202ENST00000398743 MYOM1P52179 1685 aa18.51■□□□□ 0.55
PRAME-202ENST00000398743 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
PRAME-202ENST00000398743 ABCC3O15438 1527 aa18.51■□□□□ 0.55
PRAME-202ENST00000398743 ASXL1Q8IXJ9 1541 aa18.51■□□□□ 0.55
PRAME-202ENST00000398743 NOS1P29475 1434 aa18.5■□□□□ 0.55
PRAME-202ENST00000398743 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
PRAME-202ENST00000398743 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
PRAME-202ENST00000398743 ERVK-7P63135 1459 aa18.49■□□□□ 0.55
PRAME-202ENST00000398743 SETBP1Q9Y6X0 1596 aa18.48■□□□□ 0.55
PRAME-202ENST00000398743 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
PRAME-202ENST00000398743 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
PRAME-202ENST00000398743 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
PRAME-202ENST00000398743 MYO3AQ8NEV4 1616 aa18.47■□□□□ 0.55
PRAME-202ENST00000398743 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
PRAME-202ENST00000398743 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
PRAME-202ENST00000398743 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
PRAME-202ENST00000398743 CAMSAP1Q5T5Y3 1602 aa18.46■□□□□ 0.55
PRAME-202ENST00000398743 RPGRIP1LQ68CZ1 1315 aa18.45■□□□□ 0.54
PRAME-202ENST00000398743 PPLO60437 1756 aa18.44■□□□□ 0.54
PRAME-202ENST00000398743 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
PRAME-202ENST00000398743 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
PRAME-202ENST00000398743 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
PRAME-202ENST00000398743 RICTORQ6R327 1708 aa18.42■□□□□ 0.54
PRAME-202ENST00000398743 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.548e-17■□□□□ 8.1
PRAME-202ENST00000398743 CCDC136Q96JN2 1154 aa18.42■□□□□ 0.54
PRAME-202ENST00000398743 C14orf93Q9H972 538 aaKnown RBP18.42■□□□□ 0.54
PRAME-202ENST00000398743 ADAMTS8Q9UP79 889 aa18.42■□□□□ 0.54
PRAME-202ENST00000398743 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
PRAME-202ENST00000398743 CDCA7LQ96GN5 454 aa18.4■□□□□ 0.54
PRAME-202ENST00000398743 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.54
PRAME-202ENST00000398743 PIK3C2BO00750 1634 aa18.39■□□□□ 0.54
PRAME-202ENST00000398743 ZC3H13Q5T200 1668 aaKnown RBP18.39■□□□□ 0.53
PRAME-202ENST00000398743 SIGLEC1Q9BZZ2 1709 aa18.39■□□□□ 0.53
PRAME-202ENST00000398743 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
PRAME-202ENST00000398743 CFAP65Q6ZU64 1925 aaKnown RBP18.38■□□□□ 0.53
PRAME-202ENST00000398743 GLI2P10070 1586 aa18.37■□□□□ 0.53
PRAME-202ENST00000398743 YEATS2Q9ULM3 1422 aa18.36■□□□□ 0.53
PRAME-202ENST00000398743 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
PRAME-202ENST00000398743 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
PRAME-202ENST00000398743 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
PRAME-202ENST00000398743 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
PRAME-202ENST00000398743 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
PRAME-202ENST00000398743 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
PRAME-202ENST00000398743 TMEM132EQ6IEE7 984 aa18.34■□□□□ 0.53
PRAME-202ENST00000398743 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
PRAME-202ENST00000398743 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
PRAME-202ENST00000398743 IDI1Q13907 227 aa18.3■□□□□ 0.52
PRAME-202ENST00000398743 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
PRAME-202ENST00000398743 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
PRAME-202ENST00000398743 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
PRAME-202ENST00000398743 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
PRAME-202ENST00000398743 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
PRAME-202ENST00000398743 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
PRAME-202ENST00000398743 FAM69CQ0P6D2 419 aa18.27■□□□□ 0.51
PRAME-202ENST00000398743 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
PRAME-202ENST00000398743 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
PRAME-202ENST00000398743 PREX1Q8TCU6 1659 aa18.26■□□□□ 0.51
PRAME-202ENST00000398743 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
PRAME-202ENST00000398743 DIP2BQ9P265 1576 aa18.26■□□□□ 0.51
PRAME-202ENST00000398743 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
PRAME-202ENST00000398743 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
PRAME-202ENST00000398743 POLR3AO14802 1390 aaPredicted RBP18.25■□□□□ 0.51
PRAME-202ENST00000398743 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
PRAME-202ENST00000398743 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
PRAME-202ENST00000398743 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
PRAME-202ENST00000398743 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
PRAME-202ENST00000398743 CCDC146Q8IYE0 955 aa18.24■□□□□ 0.51
PRAME-202ENST00000398743 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
PRAME-202ENST00000398743 MORC1Q86VD1 984 aa18.23■□□□□ 0.51
PRAME-202ENST00000398743 TMEM131LA2VDJ0 1609 aa18.23■□□□□ 0.51
PRAME-202ENST00000398743 TULP4Q9NRJ4 1543 aa18.23■□□□□ 0.51
PRAME-202ENST00000398743 PLIN1O60240 522 aa18.23■□□□□ 0.51
PRAME-202ENST00000398743 APAF1O14727 1248 aa18.21■□□□□ 0.51
PRAME-202ENST00000398743 MSH5O43196 834 aa18.21■□□□□ 0.51
PRAME-202ENST00000398743 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
PRAME-202ENST00000398743 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms