RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 CEP170BQ9Y4F5 1589 aaPredicted RBP23.34■■□□□ 1.33
SMAGP-202ENST00000398453 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.33
SMAGP-202ENST00000398453 KDM4FA0A1W2PPD8 638 aa23.33■■□□□ 1.33
SMAGP-202ENST00000398453 TRPM1Q7Z4N2 1603 aa23.31■■□□□ 1.32
SMAGP-202ENST00000398453 SETD1BQ9UPS6 1966 aaKnown RBP23.3■■□□□ 1.32
SMAGP-202ENST00000398453 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
SMAGP-202ENST00000398453 RIMS2Q9UQ26 1411 aa23.29■■□□□ 1.32
SMAGP-202ENST00000398453 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
SMAGP-202ENST00000398453 NRXN1Q9ULB1 1477 aa23.28■■□□□ 1.32
SMAGP-202ENST00000398453 ADGRF5Q8IZF2 1346 aa23.28■■□□□ 1.32
SMAGP-202ENST00000398453 NUTM2DQ5VT03 806 aaPredicted RBP23.27■■□□□ 1.32
SMAGP-202ENST00000398453 ZFYVE9O95405 1425 aa23.26■■□□□ 1.31
SMAGP-202ENST00000398453 KIAA1210Q9ULL0 1709 aa23.24■■□□□ 1.31
SMAGP-202ENST00000398453 TMEM2Q9UHN6 1383 aa23.24■■□□□ 1.31
SMAGP-202ENST00000398453 VGFO15240 615 aaPredicted RBP23.23■■□□□ 1.31
SMAGP-202ENST00000398453 PIK3C2GO75747 1445 aa23.23■■□□□ 1.31
SMAGP-202ENST00000398453 SLIT1O75093 1534 aa23.22■■□□□ 1.31
SMAGP-202ENST00000398453 ARHGAP23Q9P227 1491 aa23.21■■□□□ 1.31
SMAGP-202ENST00000398453 ROCK2O75116 1388 aaKnown RBP23.2■■□□□ 1.3
SMAGP-202ENST00000398453 LAMC1P11047 1609 aa23.19■■□□□ 1.3
SMAGP-202ENST00000398453 THEMISQ8N1K5 641 aaPredicted RBP23.19■■□□□ 1.3
SMAGP-202ENST00000398453 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMAGP-202ENST00000398453 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
SMAGP-202ENST00000398453 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
SMAGP-202ENST00000398453 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
SMAGP-202ENST00000398453 NBPF1Q3BBV0 1214 aa23.15■■□□□ 1.3
SMAGP-202ENST00000398453 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
SMAGP-202ENST00000398453 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.3
SMAGP-202ENST00000398453 CARD11Q9BXL7 1154 aa23.14■■□□□ 1.29
SMAGP-202ENST00000398453 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.29
SMAGP-202ENST00000398453 SCAF11Q99590 1463 aaKnown RBP23.13■■□□□ 1.29
SMAGP-202ENST00000398453 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
SMAGP-202ENST00000398453 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
SMAGP-202ENST00000398453 LTKP29376 864 aa23.12■■□□□ 1.29
SMAGP-202ENST00000398453 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
SMAGP-202ENST00000398453 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
SMAGP-202ENST00000398453 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
SMAGP-202ENST00000398453 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
SMAGP-202ENST00000398453 USP47Q96K76 1375 aa23.1■■□□□ 1.29
SMAGP-202ENST00000398453 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
SMAGP-202ENST00000398453 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
SMAGP-202ENST00000398453 ADGRB1O14514 1584 aa23.1■■□□□ 1.29
SMAGP-202ENST00000398453 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
SMAGP-202ENST00000398453 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
SMAGP-202ENST00000398453 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMAGP-202ENST00000398453 BCANQ96GW7 911 aa23.07■■□□□ 1.28
SMAGP-202ENST00000398453 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
SMAGP-202ENST00000398453 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
SMAGP-202ENST00000398453 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
SMAGP-202ENST00000398453 ADAMTS13Q76LX8 1427 aa23.03■■□□□ 1.28
SMAGP-202ENST00000398453 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
SMAGP-202ENST00000398453 TMEM132EQ6IEE7 984 aa23.03■■□□□ 1.28
SMAGP-202ENST00000398453 DIP2AQ14689 1571 aa23.01■■□□□ 1.27
SMAGP-202ENST00000398453 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
SMAGP-202ENST00000398453 HSPA2P54652 639 aa22.98■■□□□ 1.27
SMAGP-202ENST00000398453 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
SMAGP-202ENST00000398453 NPHP4O75161 1426 aaPredicted RBP22.98■■□□□ 1.27
SMAGP-202ENST00000398453 MED14O60244 1454 aa22.98■■□□□ 1.27
SMAGP-202ENST00000398453 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
SMAGP-202ENST00000398453 METP08581 1390 aa22.97■■□□□ 1.27
SMAGP-202ENST00000398453 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
SMAGP-202ENST00000398453 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
SMAGP-202ENST00000398453 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.26
SMAGP-202ENST00000398453 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
SMAGP-202ENST00000398453 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
SMAGP-202ENST00000398453 STK26Q9P289 416 aa22.94■■□□□ 1.26
SMAGP-202ENST00000398453 LRPPRCP42704 1394 aaKnown RBP22.93■■□□□ 1.26
SMAGP-202ENST00000398453 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
SMAGP-202ENST00000398453 TBX22Q9Y458 520 aa22.91■■□□□ 1.26
SMAGP-202ENST00000398453 DLC1Q96QB1 1528 aa22.9■■□□□ 1.26
SMAGP-202ENST00000398453 STRCQ7RTU9 1775 aa22.89■■□□□ 1.26
SMAGP-202ENST00000398453 CPS1P31327 1500 aa22.88■■□□□ 1.25
SMAGP-202ENST00000398453 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
SMAGP-202ENST00000398453 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
SMAGP-202ENST00000398453 XRN1Q8IZH2 1706 aaKnown RBP22.87■■□□□ 1.25
SMAGP-202ENST00000398453 ABCC11Q96J66 1382 aa22.87■■□□□ 1.25
SMAGP-202ENST00000398453 TECPR2O15040 1411 aa22.86■■□□□ 1.25
SMAGP-202ENST00000398453 PIK3R4Q99570 1358 aa22.85■■□□□ 1.25
SMAGP-202ENST00000398453 TESK2Q96S53 571 aa22.84■■□□□ 1.25
SMAGP-202ENST00000398453 CHD2O14647 1828 aaKnown RBP22.84■■□□□ 1.25
SMAGP-202ENST00000398453 PRAM1Q96QH2 718 aa22.82■■□□□ 1.24
SMAGP-202ENST00000398453 C11orf95C9JLR9 678 aaPredicted RBP22.81■■□□□ 1.24
SMAGP-202ENST00000398453 POGKQ9P215 609 aa22.81■■□□□ 1.24
SMAGP-202ENST00000398453 CCDC7Q96M83 1385 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 DISP3Q9P2K9 1392 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 SBNO2Q9Y2G9 1366 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 SAFB2Q14151 953 aaKnown RBP eCLIP22.8■■□□□ 1.24
SMAGP-202ENST00000398453 AMOTL2Q9Y2J4 779 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 FAM135BQ49AJ0 1406 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
SMAGP-202ENST00000398453 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
SMAGP-202ENST00000398453 PLEKHH1Q9ULM0 1364 aa22.79■■□□□ 1.24
SMAGP-202ENST00000398453 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
SMAGP-202ENST00000398453 NWD1Q149M9 1564 aa22.79■■□□□ 1.24
SMAGP-202ENST00000398453 KIF7Q2M1P5 1343 aa22.79■■□□□ 1.24
SMAGP-202ENST00000398453 TMF1P82094 1093 aa22.78■■□□□ 1.24
SMAGP-202ENST00000398453 WAPLQ7Z5K2 1190 aa22.77■■□□□ 1.24
SMAGP-202ENST00000398453 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
SMAGP-202ENST00000398453 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
SMAGP-202ENST00000398453 TULP4Q9NRJ4 1543 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms