RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 TRPM1Q7Z4N2 1603 aa30.49■■■□□ 2.47
KHSRP-201ENST00000398148 ZNF521Q96K83 1311 aa30.48■■■□□ 2.47
KHSRP-201ENST00000398148 USP19O94966 1318 aa30.48■■■□□ 2.47
KHSRP-201ENST00000398148 ABCC10Q5T3U5 1492 aa30.46■■■□□ 2.47
KHSRP-201ENST00000398148 PTPRGP23470 1445 aa30.45■■■□□ 2.47
KHSRP-201ENST00000398148 GPRASP1Q5JY77 1395 aa30.41■■■□□ 2.46
KHSRP-201ENST00000398148 CENPJQ9HC77 1338 aaPredicted RBP30.41■■■□□ 2.46
KHSRP-201ENST00000398148 RLBP1P12271 317 aa30.39■■■□□ 2.45
KHSRP-201ENST00000398148 CCDC141Q6ZP82 1450 aa30.39■■■□□ 2.45
KHSRP-201ENST00000398148 EIF4G3O43432 1585 aaKnown RBP30.38■■■□□ 2.45
KHSRP-201ENST00000398148 WDR7Q9Y4E6 1490 aa30.38■■■□□ 2.45
KHSRP-201ENST00000398148 CFAP70Q5T0N1 1121 aa30.38■■■□□ 2.45
KHSRP-201ENST00000398148 PCDHB15Q9Y5E8 787 aa30.37■■■□□ 2.45
KHSRP-201ENST00000398148 E9PSI1 815 aa30.36■■■□□ 2.45
KHSRP-201ENST00000398148 CARD14Q9BXL6 1004 aa30.36■■■□□ 2.45
KHSRP-201ENST00000398148 SHANK2Q9UPX8 1470 aa30.36■■■□□ 2.45
KHSRP-201ENST00000398148 SYCP2Q9BX26 1530 aa30.35■■■□□ 2.45
KHSRP-201ENST00000398148 ADCY10Q96PN6 1610 aa30.34■■■□□ 2.45
KHSRP-201ENST00000398148 CHGAP10645 457 aaKnown RBP30.34■■■□□ 2.45
KHSRP-201ENST00000398148 BECN1Q14457 450 aa30.33■■■□□ 2.45
KHSRP-201ENST00000398148 RRAGDQ9NQL2 400 aaPredicted RBP30.33■■■□□ 2.45
KHSRP-201ENST00000398148 WWC1Q8IX03 1113 aa30.33■■■□□ 2.45
KHSRP-201ENST00000398148 NKTRP30414 1462 aaKnown RBP30.32■■■□□ 2.44
KHSRP-201ENST00000398148 PRDM15P57071 1507 aaPredicted RBP30.31■■■□□ 2.44
KHSRP-201ENST00000398148 TRMT2AQ8IZ69 625 aaKnown RBP30.3■■■□□ 2.44
KHSRP-201ENST00000398148 PDZRN3Q9UPQ7 1066 aa30.3■■■□□ 2.44
KHSRP-201ENST00000398148 AFAP1Q8N556 730 aa30.3■■■□□ 2.44
KHSRP-201ENST00000398148 ARHGAP5Q13017 1502 aa30.3■■■□□ 2.44
KHSRP-201ENST00000398148 PANK2Q9BZ23 570 aa30.29■■■□□ 2.44
KHSRP-201ENST00000398148 SAMD9LQ8IVG5 1584 aa30.28■■■□□ 2.44
KHSRP-201ENST00000398148 MFAP1P55081 439 aaKnown RBP30.28■■■□□ 2.44
KHSRP-201ENST00000398148 TBC1D2Q9BYX2 928 aa30.28■■■□□ 2.44
KHSRP-201ENST00000398148 ERCC6Q03468 1493 aa30.27■■■□□ 2.44
KHSRP-201ENST00000398148 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
KHSRP-201ENST00000398148 CDCA8Q53HL2 280 aa30.26■■■□□ 2.43
KHSRP-201ENST00000398148 UPF2Q9HAU5 1272 aaKnown RBP30.26■■■□□ 2.43
KHSRP-201ENST00000398148 CGNL1Q0VF96 1302 aa30.25■■■□□ 2.43
KHSRP-201ENST00000398148 EIF3AQ14152 1382 aaKnown RBP30.24■■■□□ 2.43
KHSRP-201ENST00000398148 TCP11L2Q8N4U5 519 aa30.23■■■□□ 2.43
KHSRP-201ENST00000398148 ABCA8O94911 1581 aa30.22■■■□□ 2.43
KHSRP-201ENST00000398148 FAM43AQ8N2R8 423 aa30.22■■■□□ 2.43
KHSRP-201ENST00000398148 MORC1Q86VD1 984 aa30.21■■■□□ 2.43
KHSRP-201ENST00000398148 RSPH4AQ5TD94 716 aa30.21■■■□□ 2.43
KHSRP-201ENST00000398148 SLC12A5Q9H2X9 1139 aa30.21■■■□□ 2.43
KHSRP-201ENST00000398148 TRAK1Q9UPV9 953 aa30.21■■■□□ 2.43
KHSRP-201ENST00000398148 RARSP54136 660 aaKnown RBP30.2■■■□□ 2.43
KHSRP-201ENST00000398148 NUTM2DQ5VT03 806 aaPredicted RBP30.2■■■□□ 2.43
KHSRP-201ENST00000398148 TSR2Q969E8 191 aaKnown RBP30.18■■■□□ 2.42
KHSRP-201ENST00000398148 PDE3AQ14432 1141 aa30.18■■■□□ 2.42
KHSRP-201ENST00000398148 MAPK8IP3Q9UPT6 1336 aa30.18■■■□□ 2.42
KHSRP-201ENST00000398148 ASXL1Q8IXJ9 1541 aa30.17■■■□□ 2.42
KHSRP-201ENST00000398148 ADGRF5Q8IZF2 1346 aa30.16■■■□□ 2.42
KHSRP-201ENST00000398148 FOXD4L1Q9NU39 408 aa30.16■■■□□ 2.42
KHSRP-201ENST00000398148 MYO5CQ9NQX4 1742 aa30.16■■■□□ 2.42
KHSRP-201ENST00000398148 SAFB2Q14151 953 aaKnown RBP eCLIP30.15■■■□□ 2.42
KHSRP-201ENST00000398148 NAP1L5Q96NT1 182 aaPredicted RBP30.15■■■□□ 2.42
KHSRP-201ENST00000398148 XRCC6P12956 609 aaKnown RBP eCLIP30.14■■■□□ 2.42
KHSRP-201ENST00000398148 ANTXR1Q9H6X2 564 aa30.14■■■□□ 2.42
KHSRP-201ENST00000398148 TMEM132EQ6IEE7 984 aa30.13■■■□□ 2.41
KHSRP-201ENST00000398148 INSRP06213 1382 aa30.13■■■□□ 2.41
KHSRP-201ENST00000398148 CDC42BPBQ9Y5S2 1711 aa30.12■■■□□ 2.41
KHSRP-201ENST00000398148 FTSJ3Q8IY81 847 aaKnown RBP30.12■■■□□ 2.41
KHSRP-201ENST00000398148 TBC1D32Q96NH3 1257 aa30.12■■■□□ 2.41
KHSRP-201ENST00000398148 KIF3BO15066 747 aa30.11■■■□□ 2.41
KHSRP-201ENST00000398148 MTHFSP49914 203 aa30.11■■■□□ 2.41
KHSRP-201ENST00000398148 NUP160Q12769 1436 aa30.1■■■□□ 2.41
KHSRP-201ENST00000398148 U2AF1L5P0DN76 240 aaPredicted RBP30.09■■■□□ 2.41
KHSRP-201ENST00000398148 U2AF1Q01081 240 aaKnown RBP eCLIP30.09■■■□□ 2.413e-11■■■■□ 22.7
KHSRP-201ENST00000398148 ARHGEF5Q12774 1597 aa30.09■■■□□ 2.41
KHSRP-201ENST00000398148 RSPH6AQ9H0K4 717 aa30.09■■■□□ 2.41
KHSRP-201ENST00000398148 GOLGA6L3A6NEY3 463 aa30.09■■■□□ 2.41
KHSRP-201ENST00000398148 PMFBP1Q8TBY8 1022 aa30.08■■■□□ 2.41
KHSRP-201ENST00000398148 PIK3C2GO75747 1445 aa30.08■■■□□ 2.41
KHSRP-201ENST00000398148 SCAF11Q99590 1463 aaKnown RBP30.06■■■□□ 2.4
KHSRP-201ENST00000398148 UBE2Q2Q8WVN8 375 aa30.06■■■□□ 2.4
KHSRP-201ENST00000398148 ITPRIPQ8IWB1 547 aa30.05■■■□□ 2.4
KHSRP-201ENST00000398148 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
KHSRP-201ENST00000398148 U2SURPO15042 1029 aaKnown RBP30.05■■■□□ 2.4
KHSRP-201ENST00000398148 RWDD1Q9H446 243 aaPredicted RBP30.05■■■□□ 2.4
KHSRP-201ENST00000398148 C22orf23Q9BZE7 217 aa30.04■■■□□ 2.4
KHSRP-201ENST00000398148 MCM4P33991 863 aa30.04■■■□□ 2.4
KHSRP-201ENST00000398148 TTC37Q6PGP7 1564 aa30.04■■■□□ 2.4
KHSRP-201ENST00000398148 RUNDC1Q96C34 613 aa30.03■■■□□ 2.4
KHSRP-201ENST00000398148 L1TD1Q5T7N2 865 aaKnown RBP30.02■■■□□ 2.4
KHSRP-201ENST00000398148 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
KHSRP-201ENST00000398148 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.4
KHSRP-201ENST00000398148 SMC4Q9NTJ3 1288 aa30.01■■■□□ 2.39
KHSRP-201ENST00000398148 TRAK2O60296 914 aa30■■■□□ 2.39
KHSRP-201ENST00000398148 EIF2AK4Q9P2K8 1649 aaKnown RBP29.99■■■□□ 2.39
KHSRP-201ENST00000398148 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
KHSRP-201ENST00000398148 NSD3Q9BZ95 1437 aa29.98■■■□□ 2.39
KHSRP-201ENST00000398148 EXOSC9Q06265 439 aaKnown RBP29.97■■■□□ 2.39
KHSRP-201ENST00000398148 LNPKQ9C0E8 428 aa29.95■■■□□ 2.38
KHSRP-201ENST00000398148 DZIP1LQ8IYY4 767 aaKnown RBP29.94■■■□□ 2.38
KHSRP-201ENST00000398148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.94■■■□□ 2.388e-7■■□□□ 11.6
KHSRP-201ENST00000398148 UGGT1Q9NYU2 1555 aa29.94■■■□□ 2.38
KHSRP-201ENST00000398148 PNNQ9H307 717 aaKnown RBP29.94■■■□□ 2.38
KHSRP-201ENST00000398148 MVPQ14764 893 aaKnown RBP29.94■■■□□ 2.38
KHSRP-201ENST00000398148 PREX2Q70Z35 1606 aa29.93■■■□□ 2.38
KHSRP-201ENST00000398148 ZKSCAN2Q63HK3 967 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms