RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 NUTM2DQ5VT03 806 aaPredicted RBP37.18■■■■□ 3.54
TMEM55B-202ENST00000398020 ZFYVE9O95405 1425 aa37.18■■■■□ 3.54
TMEM55B-202ENST00000398020 DMRT2Q9Y5R5 561 aa37.16■■■■□ 3.54
TMEM55B-202ENST00000398020 SENP3Q9H4L4 574 aaPredicted RBP37.15■■■■□ 3.54
TMEM55B-202ENST00000398020 NPHP4O75161 1426 aaPredicted RBP37.13■■■■□ 3.53
TMEM55B-202ENST00000398020 MED14O60244 1454 aa37.12■■■■□ 3.53
TMEM55B-202ENST00000398020 RGL3Q3MIN7 710 aa37.12■■■■□ 3.53
TMEM55B-202ENST00000398020 PPP1R15AO75807 674 aaPredicted RBP37.11■■■■□ 3.53
TMEM55B-202ENST00000398020 SPATA31E1Q6ZUB1 1445 aa37.1■■■■□ 3.53
TMEM55B-202ENST00000398020 IQGAP1P46940 1657 aa37.1■■■■□ 3.53
TMEM55B-202ENST00000398020 HDGFP51858 240 aaKnown RBP37.08■■■■□ 3.53
TMEM55B-202ENST00000398020 NEXMIFQ5QGS0 1516 aa37.07■■■■□ 3.52
TMEM55B-202ENST00000398020 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.06■■■■□ 3.52
TMEM55B-202ENST00000398020 BCANQ96GW7 911 aa37.03■■■■□ 3.52
TMEM55B-202ENST00000398020 PLEKHG1Q9ULL1 1385 aa36.99■■■■□ 3.51
TMEM55B-202ENST00000398020 PPLO60437 1756 aa36.98■■■■□ 3.51
TMEM55B-202ENST00000398020 RPGRIP1LQ68CZ1 1315 aa36.98■■■■□ 3.51
TMEM55B-202ENST00000398020 SLC26A8Q96RN1 970 aa36.97■■■■□ 3.51
TMEM55B-202ENST00000398020 SIN3AQ96ST3 1273 aa36.97■■■■□ 3.51
TMEM55B-202ENST00000398020 IFT172Q9UG01 1749 aa36.93■■■■□ 3.5
TMEM55B-202ENST00000398020 ZNF335Q9H4Z2 1342 aaPredicted RBP36.92■■■■□ 3.5
TMEM55B-202ENST00000398020 VGFO15240 615 aaPredicted RBP36.91■■■■□ 3.5
TMEM55B-202ENST00000398020 NEUROD1Q13562 356 aa36.9■■■■□ 3.5
TMEM55B-202ENST00000398020 ADGRF5Q8IZF2 1346 aa36.87■■■■□ 3.49
TMEM55B-202ENST00000398020 NRXN3Q9Y4C0 1643 aa36.86■■■■□ 3.49
TMEM55B-202ENST00000398020 ADAMTS13Q76LX8 1427 aa36.86■■■■□ 3.49
TMEM55B-202ENST00000398020 SETBP1Q9Y6X0 1596 aa36.84■■■■□ 3.49
TMEM55B-202ENST00000398020 DCAF11Q8TEB1 546 aa36.83■■■■□ 3.49
TMEM55B-202ENST00000398020 KDM2AQ9Y2K7 1162 aa36.81■■■■□ 3.48
TMEM55B-202ENST00000398020 TBX22Q9Y458 520 aa36.79■■■■□ 3.48
TMEM55B-202ENST00000398020 DIP2AQ14689 1571 aa36.77■■■■□ 3.48
TMEM55B-202ENST00000398020 MYOM2P54296 1465 aa36.77■■■■□ 3.48
TMEM55B-202ENST00000398020 LTBP4Q8N2S1 1624 aa36.77■■■■□ 3.48
TMEM55B-202ENST00000398020 STRCP1A6NGW2 1772 aa36.76■■■■□ 3.48
TMEM55B-202ENST00000398020 CCER1Q8TC90 406 aaPredicted RBP36.74■■■■□ 3.47
TMEM55B-202ENST00000398020 PIK3C2GO75747 1445 aa36.72■■■■□ 3.47
TMEM55B-202ENST00000398020 ALKQ9UM73 1620 aa36.72■■■■□ 3.47
TMEM55B-202ENST00000398020 METP08581 1390 aa36.7■■■■□ 3.47
TMEM55B-202ENST00000398020 NRXN1Q9ULB1 1477 aa36.7■■■■□ 3.47
TMEM55B-202ENST00000398020 L3MBTL2Q969R5 705 aa36.7■■■■□ 3.47
TMEM55B-202ENST00000398020 SETD1AO15047 1707 aaKnown RBP36.68■■■■□ 3.46
TMEM55B-202ENST00000398020 CHD2O14647 1828 aaKnown RBP36.67■■■■□ 3.46
TMEM55B-202ENST00000398020 KCNA6P17658 529 aa36.67■■■■□ 3.46
TMEM55B-202ENST00000398020 PTPRUQ92729 1446 aa36.64■■■■□ 3.46
TMEM55B-202ENST00000398020 CPS1P31327 1500 aa36.63■■■■□ 3.45
TMEM55B-202ENST00000398020 NWD1Q149M9 1564 aa36.63■■■■□ 3.45
TMEM55B-202ENST00000398020 PIK3R4Q99570 1358 aa36.63■■■■□ 3.45
TMEM55B-202ENST00000398020 CFAP70Q5T0N1 1121 aa36.61■■■■□ 3.45
TMEM55B-202ENST00000398020 STAC3Q96MF2 364 aa36.61■■■■□ 3.45
TMEM55B-202ENST00000398020 CERKQ8TCT0 537 aa36.61■■■■□ 3.45
TMEM55B-202ENST00000398020 TONSLQ96HA7 1378 aa36.6■■■■□ 3.45
TMEM55B-202ENST00000398020 CLSPNQ9HAW4 1339 aa36.6■■■■□ 3.45
TMEM55B-202ENST00000398020 AMOTL2Q9Y2J4 779 aa36.6■■■■□ 3.45
TMEM55B-202ENST00000398020 C14orf93Q9H972 538 aaKnown RBP36.58■■■■□ 3.45
TMEM55B-202ENST00000398020 LRRC7Q96NW7 1537 aa36.57■■■■□ 3.44
TMEM55B-202ENST00000398020 TMEM132EQ6IEE7 984 aa36.57■■■■□ 3.44
TMEM55B-202ENST00000398020 RBM33Q96EV2 1170 aaKnown RBP36.56■■■■□ 3.44
TMEM55B-202ENST00000398020 ASXL1Q8IXJ9 1541 aa36.55■■■■□ 3.44
TMEM55B-202ENST00000398020 LAMC1P11047 1609 aa36.55■■■■□ 3.44
TMEM55B-202ENST00000398020 NKTRP30414 1462 aaKnown RBP36.54■■■■□ 3.44
TMEM55B-202ENST00000398020 PRAG1Q86YV5 1406 aa36.53■■■■□ 3.44
TMEM55B-202ENST00000398020 XRN1Q8IZH2 1706 aaKnown RBP36.53■■■■□ 3.44
TMEM55B-202ENST00000398020 PROSER2Q86WR7 435 aaPredicted RBP36.52■■■■□ 3.44
TMEM55B-202ENST00000398020 STK26Q9P289 416 aa36.49■■■■□ 3.43
TMEM55B-202ENST00000398020 TMEM94Q12767 1356 aa36.48■■■■□ 3.43
TMEM55B-202ENST00000398020 XIRP1Q702N8 1843 aaKnown RBP36.47■■■■□ 3.43
TMEM55B-202ENST00000398020 ADGRB1O14514 1584 aa36.44■■■■□ 3.42
TMEM55B-202ENST00000398020 YTHDC2Q9H6S0 1430 aaKnown RBP36.43■■■■□ 3.42
TMEM55B-202ENST00000398020 LRPPRCP42704 1394 aaKnown RBP36.41■■■■□ 3.42
TMEM55B-202ENST00000398020 ROBO2Q9HCK4 1378 aa36.41■■■■□ 3.42
TMEM55B-202ENST00000398020 IQSEC2Q5JU85 1478 aa36.39■■■■□ 3.42
TMEM55B-202ENST00000398020 NBPF8Q3BBV2 869 aa36.39■■■■□ 3.42
TMEM55B-202ENST00000398020 NBPF1Q3BBV0 1214 aa36.39■■■■□ 3.42
TMEM55B-202ENST00000398020 KIAA1210Q9ULL0 1709 aa36.38■■■■□ 3.42
TMEM55B-202ENST00000398020 PTCH1Q13635 1447 aa36.37■■■■□ 3.41
TMEM55B-202ENST00000398020 ABCC11Q96J66 1382 aa36.35■■■■□ 3.41
TMEM55B-202ENST00000398020 C14orf37Q86TY3 774 aa36.35■■■■□ 3.41
TMEM55B-202ENST00000398020 TRPM1Q7Z4N2 1603 aa36.34■■■■□ 3.41
TMEM55B-202ENST00000398020 KNDC1Q76NI1 1749 aa36.34■■■■□ 3.41
TMEM55B-202ENST00000398020 TECPR2O15040 1411 aa36.34■■■■□ 3.41
TMEM55B-202ENST00000398020 TRAK1Q9UPV9 953 aa36.32■■■■□ 3.4
TMEM55B-202ENST00000398020 WAPLQ7Z5K2 1190 aa36.31■■■■□ 3.4
TMEM55B-202ENST00000398020 TIMELESSQ9UNS1 1208 aa36.29■■■■□ 3.4
TMEM55B-202ENST00000398020 PLEKHH1Q9ULM0 1364 aa36.27■■■■□ 3.4
TMEM55B-202ENST00000398020 UBAP1LF5GYI3 381 aa36.27■■■■□ 3.4
TMEM55B-202ENST00000398020 NCOA3Q9Y6Q9 1424 aa36.27■■■■□ 3.4
TMEM55B-202ENST00000398020 MSH6P52701 1360 aa36.27■■■■□ 3.4
TMEM55B-202ENST00000398020 ROCK2O75116 1388 aaKnown RBP36.25■■■■□ 3.39
TMEM55B-202ENST00000398020 NALCNQ8IZF0 1738 aa36.24■■■■□ 3.39
TMEM55B-202ENST00000398020 PRAM1Q96QH2 718 aa36.23■■■■□ 3.39
TMEM55B-202ENST00000398020 SAFB2Q14151 953 aaKnown RBP eCLIP36.23■■■■□ 3.39
TMEM55B-202ENST00000398020 DLC1Q96QB1 1528 aa36.22■■■■□ 3.39
TMEM55B-202ENST00000398020 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.22■■■■□ 3.39
TMEM55B-202ENST00000398020 FAM135BQ49AJ0 1406 aa36.21■■■■□ 3.39
TMEM55B-202ENST00000398020 C19orf44Q9H6X5 657 aa36.21■■■■□ 3.39
TMEM55B-202ENST00000398020 ADGRL3Q9HAR2 1447 aa36.21■■■■□ 3.39
TMEM55B-202ENST00000398020 TOM1O60784 492 aa36.19■■■■□ 3.38
TMEM55B-202ENST00000398020 SIRT1Q96EB6 747 aa36.19■■■■□ 3.38
TMEM55B-202ENST00000398020 POGKQ9P215 609 aa36.19■■■■□ 3.38
TMEM55B-202ENST00000398020 RALGAPBQ86X10 1494 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms