RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TMEM2Q9UHN6 1383 aa24.57■■□□□ 1.52
TSPAN4-205ENST00000397406 TXNDC2Q86VQ3 553 aa24.57■■□□□ 1.52
TSPAN4-205ENST00000397406 CLTCL1P53675 1640 aa24.56■■□□□ 1.52
TSPAN4-205ENST00000397406 CCDC144AA2RUR9 1427 aa24.55■■□□□ 1.52
TSPAN4-205ENST00000397406 CPS1P31327 1500 aa24.55■■□□□ 1.52
TSPAN4-205ENST00000397406 STRCP1A6NGW2 1772 aa24.55■■□□□ 1.52
TSPAN4-205ENST00000397406 UBAP1LF5GYI3 381 aa24.54■■□□□ 1.52
TSPAN4-205ENST00000397406 TIMELESSQ9UNS1 1208 aa24.53■■□□□ 1.52
TSPAN4-205ENST00000397406 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
TSPAN4-205ENST00000397406 TONSLQ96HA7 1378 aa24.5■■□□□ 1.51
TSPAN4-205ENST00000397406 SLC52A1Q9NWF4 448 aa24.5■■□□□ 1.51
TSPAN4-205ENST00000397406 ADGRB3O60242 1522 aa24.49■■□□□ 1.51
TSPAN4-205ENST00000397406 KDM5AP29375 1690 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-205ENST00000397406 KIF1BO60333 1816 aa24.48■■□□□ 1.51
TSPAN4-205ENST00000397406 LRRC7Q96NW7 1537 aa24.48■■□□□ 1.51
TSPAN4-205ENST00000397406 STAG3Q9UJ98 1225 aa24.47■■□□□ 1.51
TSPAN4-205ENST00000397406 EID1Q9Y6B2 187 aa24.45■■□□□ 1.51
TSPAN4-205ENST00000397406 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
TSPAN4-205ENST00000397406 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
TSPAN4-205ENST00000397406 TMEM131LA2VDJ0 1609 aa24.41■■□□□ 1.5
TSPAN4-205ENST00000397406 L3MBTL2Q969R5 705 aa24.41■■□□□ 1.5
TSPAN4-205ENST00000397406 SLC26A8Q96RN1 970 aa24.4■■□□□ 1.5
TSPAN4-205ENST00000397406 PIP4K2BP78356 416 aa24.38■■□□□ 1.49
TSPAN4-205ENST00000397406 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-205ENST00000397406 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
TSPAN4-205ENST00000397406 RIMS2Q9UQ26 1411 aa24.36■■□□□ 1.49
TSPAN4-205ENST00000397406 MYO5BQ9ULV0 1848 aa24.36■■□□□ 1.49
TSPAN4-205ENST00000397406 IFT172Q9UG01 1749 aa24.36■■□□□ 1.49
TSPAN4-205ENST00000397406 TOM1O60784 492 aa24.35■■□□□ 1.49
TSPAN4-205ENST00000397406 HSPA1LP34931 641 aa24.35■■□□□ 1.49
TSPAN4-205ENST00000397406 KCNA6P17658 529 aa24.32■■□□□ 1.48
TSPAN4-205ENST00000397406 PLEKHG1Q9ULL1 1385 aa24.32■■□□□ 1.48
TSPAN4-205ENST00000397406 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-205ENST00000397406 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
TSPAN4-205ENST00000397406 NUTM2DQ5VT03 806 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-205ENST00000397406 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-205ENST00000397406 CHGAP10645 457 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-205ENST00000397406 RBM33Q96EV2 1170 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-205ENST00000397406 PPLO60437 1756 aa24.29■■□□□ 1.48
TSPAN4-205ENST00000397406 DISP3Q9P2K9 1392 aa24.28■■□□□ 1.48
TSPAN4-205ENST00000397406 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
TSPAN4-205ENST00000397406 ILDR2Q71H61 639 aa24.27■■□□□ 1.48
TSPAN4-205ENST00000397406 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
TSPAN4-205ENST00000397406 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
TSPAN4-205ENST00000397406 NWD1Q149M9 1564 aa24.26■■□□□ 1.47
TSPAN4-205ENST00000397406 NEXMIFQ5QGS0 1516 aa24.23■■□□□ 1.47
TSPAN4-205ENST00000397406 NBPF8Q3BBV2 869 aa24.23■■□□□ 1.47
TSPAN4-205ENST00000397406 MYOM2P54296 1465 aa24.22■■□□□ 1.47
TSPAN4-205ENST00000397406 BCANQ96GW7 911 aa24.22■■□□□ 1.47
TSPAN4-205ENST00000397406 TBX22Q9Y458 520 aa24.22■■□□□ 1.47
TSPAN4-205ENST00000397406 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
TSPAN4-205ENST00000397406 KDM2AQ9Y2K7 1162 aa24.21■■□□□ 1.47
TSPAN4-205ENST00000397406 PRAG1Q86YV5 1406 aa24.21■■□□□ 1.47
TSPAN4-205ENST00000397406 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
TSPAN4-205ENST00000397406 STAC3Q96MF2 364 aa24.19■■□□□ 1.46
TSPAN4-205ENST00000397406 RPGRIP1LQ68CZ1 1315 aa24.19■■□□□ 1.46
TSPAN4-205ENST00000397406 NKTRP30414 1462 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-205ENST00000397406 TRPM1Q7Z4N2 1603 aa24.19■■□□□ 1.46
TSPAN4-205ENST00000397406 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
TSPAN4-205ENST00000397406 ZNF326Q5BKZ1 582 aaKnown RBP24.18■■□□□ 1.46
TSPAN4-205ENST00000397406 NRXN1Q9ULB1 1477 aa24.16■■□□□ 1.46
TSPAN4-205ENST00000397406 PTPRUQ92729 1446 aa24.16■■□□□ 1.46
TSPAN4-205ENST00000397406 RALGAPBQ86X10 1494 aa24.15■■□□□ 1.46
TSPAN4-205ENST00000397406 CHD2O14647 1828 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-205ENST00000397406 NRXN3Q9Y4C0 1643 aa24.14■■□□□ 1.46
TSPAN4-205ENST00000397406 KIAA1210Q9ULL0 1709 aa24.14■■□□□ 1.45
TSPAN4-205ENST00000397406 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
TSPAN4-205ENST00000397406 ADGRF5Q8IZF2 1346 aa24.11■■□□□ 1.45
TSPAN4-205ENST00000397406 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
TSPAN4-205ENST00000397406 MED1Q15648 1581 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-205ENST00000397406 SETBP1Q9Y6X0 1596 aa24.09■■□□□ 1.45
TSPAN4-205ENST00000397406 PIK3R4Q99570 1358 aa24.09■■□□□ 1.45
TSPAN4-205ENST00000397406 PIK3C2GO75747 1445 aa24.08■■□□□ 1.45
TSPAN4-205ENST00000397406 LAMC1P11047 1609 aa24.08■■□□□ 1.45
TSPAN4-205ENST00000397406 METP08581 1390 aa24.08■■□□□ 1.44
TSPAN4-205ENST00000397406 VGFO15240 615 aaPredicted RBP24.06■■□□□ 1.44
TSPAN4-205ENST00000397406 AMOTL2Q9Y2J4 779 aa24.06■■□□□ 1.44
TSPAN4-205ENST00000397406 MSH6P52701 1360 aa24.04■■□□□ 1.44
TSPAN4-205ENST00000397406 GPRASP1Q5JY77 1395 aa24.04■■□□□ 1.44
TSPAN4-205ENST00000397406 NCOA3Q9Y6Q9 1424 aa24.02■■□□□ 1.44
TSPAN4-205ENST00000397406 SLAIN2Q9P270 581 aa24.01■■□□□ 1.43
TSPAN4-205ENST00000397406 ROBO1Q9Y6N7 1651 aa24.01■■□□□ 1.43
TSPAN4-205ENST00000397406 ROCK2O75116 1388 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-205ENST00000397406 NBPF1Q3BBV0 1214 aa24.01■■□□□ 1.43
TSPAN4-205ENST00000397406 XRN1Q8IZH2 1706 aaKnown RBP24■■□□□ 1.43
TSPAN4-205ENST00000397406 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
TSPAN4-205ENST00000397406 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
TSPAN4-205ENST00000397406 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
TSPAN4-205ENST00000397406 ADGRB1O14514 1584 aa23.95■■□□□ 1.43
TSPAN4-205ENST00000397406 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.42
TSPAN4-205ENST00000397406 C19orf44Q9H6X5 657 aa23.95■■□□□ 1.42
TSPAN4-205ENST00000397406 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
TSPAN4-205ENST00000397406 SOCS7O14512 581 aa23.93■■□□□ 1.42
TSPAN4-205ENST00000397406 USP47Q96K76 1375 aa23.93■■□□□ 1.42
TSPAN4-205ENST00000397406 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
TSPAN4-205ENST00000397406 EIF4G2P78344 907 aaKnown RBP eCLIP23.93■■□□□ 1.42
TSPAN4-205ENST00000397406 ASXL1Q8IXJ9 1541 aa23.92■■□□□ 1.42
TSPAN4-205ENST00000397406 HSPA5P11021 654 aaKnown RBP23.92■■□□□ 1.42
TSPAN4-205ENST00000397406 C14orf37Q86TY3 774 aa23.92■■□□□ 1.42
TSPAN4-205ENST00000397406 RGS17Q9UGC6 210 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms